| Id Trinity | FTRINITY_DN58178_c0_g4_i9 |
|---|---|
| Name Transcript | Ll_transcript_79493 |
| Sequence | AAAAAAAGTATATATTAAGGTGCATGTTTCTGGATTGTTCATGAAGCCTGCTAAGGACAGGGATATTTTCTTTGCTCTTCACCTTTACTCCACGGAATCA AAGGCAGAGAATACTAAATTATGTAGTGTAAACACAACTTGATATCCAAGTTGTGTAATATAATAATACATCACAATATATATATATATTTGATGGTATA TATGTGATTATATATCATGCATTTTATATATATATGTTATGGTTATACAAAGTTTGAGTTGTTTCAATTCGTCGACAAGAAAACTTAGTTTGACAATTTG ATTGGTTTTTTGGATATTTTTCCTCTGCTGCGGTTTTTCATAGCTTCTGGTTTGAAGGTTTGTATTTTTATTGTTGTTGGGAAAAATGGCTAATGAAGGA GATAAAGGCAATGATTTCTATGGTGTTCTGGGATTGAATAAGGAGTGCACTGAATCAGAGCTCAGAATTGCTTATAAGAAACTTGCACTGAAATGGCACC CAGATCGTTGTTCAGCTTCTGGGAATTCTAAGTTTGTTGAAGAAGCTAAGAAGAAATTCCAGGCAATCCAACAAGCCTATTCTGTTTTATCTGACGCAAA CAAGAGGTTAATGTACGACGTAGGAGTCTATGACAGTGATGATGACGAAAATGGTATGGGGGATTTCTTGAACGAAATGGTAACAATGATGAGCCAAACA AAACCAAATGAAAGTGGAGGGGAGAGCTTTGAGGAGTTGCAACAATTGTTTGAAGATATGTTTCAAGATGATATTAGATCAGATAGAAGAACCTCTCACA CTACTGCTACTTGTTGTACTTCATCTACATGCATGACTTTTAGTGAAACTTCTAGTTCAAATAAACGCAATTCCTCCGAGATGAATTTTGGGAGGGTGGA TGATTCTTTTGATTTCAATGGTGGCTACCCGAACTTCTGTTTTGGGGTTAGTATATAAACTATACATTACACTTTTCATGTTTTTCATTTCATACAGCAT CCATGGCATGCACAACATTTCTGTTTTGAGCATGATTCATTCGGGTATATATCTTTGCAAATTAGGCCAAGATAGAGTTAATTGGTTAAAAGAAAAGATA GTCTATTCTTGTTGAACATATCTATCTTAAGACTTAAGAGTCTGTTAATAAGTGGTATCTTTTGTGTTGTACATTTCCTCAAGGTTGGTCTTGTAAATTA TCATTACCAATGAATGAGGATACAAAACAATGGAATGTATTTGAGGTATGTTGAAGTGGTAAGTTTTTGTGGAAGTCCCAATTTACATGGCATATTTCAT GCATTGTAGCTTAGCTGGACTTCAATCCAAATAAGGCTTTGTTTATTGTGATTGAGCATTTCCTCTTGTTCTTGATGTGAAGACAGGTGAATCACATTCA AGATTTCAAGAAGCAAAAGGGAGGAATCCAAGAAGAAGGAGGTAAGAGTAGACATAGAAGTGGTAGAAAGCAAAAAATCTCACATGGTCATGATGTTTCT TCTGATGACTTCCCTAGCATTTCTGCTATGTAATGAACTTGGTGGCATATTAGTTTGCATTTGGATATGTGAAATCCTTCATCTTTGACATGTTACAAAA GTATTAAGTACTCACTTCTAAGTCATTAAAAGTGGCACTGTGGCATTTTCAATCTTTTGTAACCATGGTACAATCATGGCTAAGACTTTGAACTTAAATC AATTGATAACCCATCTTAGTCTCTTCAATTATGCAGATTGCAGAGAATAATATTCTTGGTTTGCCTAAATTTGACAACAGAAAGAAAACATTATGTCATT TTTGAAGTTGGTCAATTCAGCATCTCATATGTTATAAGATATGTGATTTGCTTAGTCACAAATCTCACATTCCTTGAGATATTTTCTATGCATAATGAAA ACAAAGTGGAACTATTAGAGGTTATAGTTGTATGACAATGACTAATGAATCAAGCAAAATACAAATGGAAGGTGGTGGTTACTAATTTTATAAATGGAAG GGTCCTACATCACATGGGATATGGGACCCGGATAAGTACTGTTGTATGATCCACTTGCAAAAGCCTATGCCTACATTTTTGGTATGGAAAGTTGAGCATA GTACAATAAACTAGTCAACTTAAAATAATGCAGATAGTTCAAATACACACTTCTAGTCTACTTTTGGTTTTGAAAGCCATTTGGGACCAAACAAGTAGCC AAATATGTCCAATGCTGGTGTTATGATTTATGGGTCCCATACACCCAATAATTGGTTGGCTATTGTTGTGAAAGTTGTAAGTGTGACTTGTGCTTAAAGT AAAAATCCATGTTAGAGATCAATACATCTAATATCTTATGATGATAGATTTGCTTTGTGTTGTTATTCTTTATTTTTTGACTGATTTATTTGCATATATT CTTGGATATTAAGGTTCCACACACCTCTAGCAACATGTTTTAGAAAATATGGGCTCATTCTCTTATTATTAGATTGGGCCTGTATTATTGTACTTGGTAT TTAAAGTTGAACGATTAATATCCATTGTGCTAATTGAATGTTTTATTTTTCTTATTTAAACTAGATTATATTCATTTTGGTAAAACTTATATTTTAACAA TTTTATAATATGCTTATCAAACTAATAAATCAGTTTTACAGAAAAAATATAAACATTGATAGTATATGAGTTTTATATGTCATCATTATATCATTTAATG TTCATGTTTTATTACCGACTCATCAAAAAATTAATCCAATATAAATATCCTATAACTAGGGCTTAGCTTGAATCCAGTGAGGATTGGATGGGTAGTGATT GTTTAGACCCATACAAAGGGTGAAGTGTTTTGTGGGATCTTTCTATGATGTAGGTACATTTTCGAGTAAAGTTTAAAGTAGCTGATTCTCAAGCAACCAA AAATCAAGAGGGGAAACAAACAGAAATTAAAGATCCATCATTTTATTGATTTATTTTATATATACACACTCTATGTTATGATGAGATTATGATGTTCAAT TATAATGACAATTTACCAGCATACAATAAAAATTCCATACCATATTAGTGCCTATGAAATGATACATGTGCCCTTTTGAAAATCATTCGGCTGAAGCAGA TGGGTTTTTAAGTTTATATCATGCATGGTATTCCAACTTTC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_74840; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_79493
| Blastp | Chaperone protein DnaJ from Thermotoga with 37.7% of identity |
|---|---|
| Blastx | Chaperone protein DnaJ from Thermotoga with 36.36% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (CTN_1726) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019455559.1) |
| Pfam | DnaJ domain (PF00226.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |