Ll_transcript_78588

• Id Trinity: FTRINITY_DN58179_c1_g4_i4
• Name Transcript: Ll_transcript_78588
• Sequence: TTTCAAATGTTTGGCTCTAATTATTGTCATTAATCAAGTGATTCTAGTCAATAACATAATATTCATATTAGCAATTACTAAAACATTTGATAATGTTAGC CACTTCACATAATCATATGAAAAAAAATCCAAACTTTTATAATCAATTTTTTAAATTGAAAACCAATATTCAAACTTAAATTAAATACATACTTTCTGTA AATAAATATTTTCATTTATTTATACATATTTATTTTATTTTGGAGGGTAATGTTTCCCTCTCTTCTCTAGTCCCTCATTCTTGTGCTCCCAATTCTCAAT ATCCATCCATCCACTCACCCAGGTATGAATATATAATATCATATAACATAAGCTCATTATTAAATATATATAACACAAAAGGAACATAGCTGAGCTGTTA TTTTTTAAGGGAAAAAAACAACCATGTCTTGTTTTTGTTGTTGTTGTTAATGATGCTTTTGTTACCTTTTCCCATTCATGGGTTTCAGGTGTGAAAGTGA GAGGAACAAATAAGTGGGAGAGAAATTAGAGTGTAAAAGGAAGGAACTAAACCCTTTTAACAAAAAATAGTTAGTGACTACTTTCTTCTTTTACATTATT TGGTTGGGACTTGGGAGTAATAATAATTACTACAGGGTTAGGTAGAAGAGGCTATGATGTGTTGCCTCAGATCCAGGAAAGTGTGTGAAAAAAGGTGTTA TCTTTTTGGGGTTTCCTTATGATTCTCGAGACTTTGCTTTTTCTATGGTTGTTTCTCATGACCTCCTTTCTTCTTTCTTGTGTTTAGAGATAAGCTGTGT TTTTTTTATGTGGTGGGGTTTAATCATTTTTAAGTGAAATATGTTTTGTTGCAGATAAAGTTTGTTATTTTCTATTTTGGTTTCAGGGTGTTTTCCTCTC ACTAGATTTGACACTGGTAGATAGATACAGAAAGAGTTCAGAGGACAAGTTGGTAATGCTTGAAAAGGGTGTTAGCATGGCCATTCATTGTTAAAAGTTC CACAAATGGAAGTTTGGATCCGTTTTTGTTGACCGGATCTGACTATTCGATTTCACTTTCACCATCCATATCTGAATTTGCCTCCTTCGGTATTTTATTG GATTTGTTAGGAATCAAAAATGCTACCTTTTACATTACATGTTCATTTTCAATCAAAAAAAGCAGGTGAACTGTTAGTTGAAGTATGAAAGATTTTGTGA TACCAGAGGGGTGGGAGGGTAACTTTTTTTACTGCCTAGATCGGGGTTTCAATGGAGGAATTGTCATTCGCTGTTGCAGTGCCATTACGAGTAGGTAATT CAGTCTGTGATAATAATCCAACCGTAGCTACGACCCACATGGATGCATCGAGGTTTAAGCTAATGGGAGATGCAGGGTTGTTATCTAATTCTGTAACTAA GTTAGAGACAATTGCAAGTTCTGATGGTGGCCATAATGAAGTTGGTATAGCCAAAGTCACATTGCCCAAACAGGATAGGGAAGGAGATAATTCTTTGTTG GACACAATATCCAATAATAAAGGCAGCACTTTGGATGCTGGTGATGAAGCGTTAATCCCTGAAGTTGAGGAGGATGATTCATTATCATTGGAAGGTGATC AGATTATTGATAGTTCATACTCTCATTCGGCAATAAGTGCGAACAGTAGCTTGTGTGGGGAGGAGTTCATCAATTTTGAGGCTAATTCAGATGTCGGGAA ACCATGTTCCATAGATATAGAGAAGAGCATATGTGGTGTCAATATTGTTGTCCGGCCTGCTGATTTGGGACCAAACGTCAAGACAGATATGATGAGTGAA CCCCTTGCTGTTGCAGGTAGCCTTGAAGAAGAGACCGAAGTAGGATCTGTCTCTGAGCCTTCTGCAACTGGTCTTAATCAGCAGGAAAAAGGAGGAAGTG GAACAGTTGGGCGGAGTGTTTTTGAATTGGATTATGCACCACTTTGGGGATTTATATCTCTGTGTGGAAGAAGACCAGAGATGGAAGATGCAGTTACAAC TGTACCTCGATTTTTGGAAATTCCTATTCAAATGCTAATTGGTGATCGGGTACTTGATGGAATGAACAAGTGTTTCAATCAACAGATGATTCATTTCTTT GGAGTTTATGATGGCCATGGTGGTTCTCAGGTGGCAGATTATTGTCGTGATCGTATCCATTTGGCCTTGGCTGAGGAAATAGAACTCGTCAAGGAAGGTC TAATTAGCGGAAGTATTATGGATGGTTGTCTAGATCAGTGGAAAAAAGCTTTTACGAATTGTTTCTTGAAGGTTGATGCTGAAGTTGGAGGAAAAGTTAA TAATGAACCTGTTGCCCCAGATACTGTTGGTTCCACGGCTGTTGTTGCTATTATCTGTTCATCTCATATCATAATCGCAAACTGTGGTGATTCAAGAGCG GTTCTTTGTCGTGGGAAAGAACCCATGGCGTTATCAGTAGATCATAAACCTAATCGAGATGACGAATATGCAAGAATCGAGGCAGCTGGTGGAAAGGTGA TACAGTGGAATGGGCATCGTGTATTTGGTGTTCTTGCGATGTCACGGTCTATTGGTTGTAAGCTGGTAGGAAATATGGCAATTTGATTTTTCTTATTTCT CGGGCCAAAGGCTGCTGGTAGAGGCAATTATTAAGTGATAGATATTTGAAGCCGTGGATTATTCCAGAACCAGAAGTTATGTTTCTTCCCCGTGCGAAGG ATGATGAGTGTCTCATTCTGGCCAGTGATGGTCTGTGGGATGTCATGACGAATGAAGAGGTGTGTGACATAGCTCGGAGACGGTTACTTCTCTGGCACAA GAAAAATGGCTTGGAACTACCCTCAGAGAGGGGAGAGGGAATTGATCCCGCTGCACAAGCAGCAGCAGAGTACCTATCAAACCGTGCTCTTCAGAAAGGA AGCAAAGATAACATCACTGTCATTGTAGTGGATTTAAAAGCTCAGAGAAAATTTAAGACCAAGACATGATGATGATTTCTTCAACCGCTGCACTTTGGTT GTTTGAAGATGATTGTGAGATAGAAAGCTTCATATAATCCATTATAGTTTTGCCCATTGATTTTTCACAAGGGCATGCATCTCTTGGCTGAATGAGAATA GCACTATGTACTATAATACATTCATACACCTTCACTAGAACTCTACTGATTGAGTCTCCTTGTTCATTGTGTTACATTAGAGCTATGTAAATCTTAGCTA ATTGTTGTAGGGATAGGAGATCAGTTCCATGCCTTTGAAATTTGTCAAAAATGTTGTATTCATTATTATGCCCCCGGGTACAAAGGCTCTGTGAGGTATT TACTGGATATTGTTTTAC
• Tissue: flowers
• Gene name: LI_gene_74848;
• Additional information: details;

Expression of Ll_transcript_78588

FPKM

• FPAB: 4.6
• FPNAB: 10.1
• LF1: 6.4
• LF2: 6.1
• LF3: 6.5
• LF4: 4.7
• UF1: 5.1
• UF2: 6.7
• UF3: 5.2
• UF4: 4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_78588

• Blastp: Probable protein phosphatase 2C 6 from Oryza sativa with 61.76% of identity
• Blastx: Protein phosphatase 2C 16 from Arabidopsis with 62.39% of identity
• Eggnog: Phosphatase(COG0631)
• Kegg: Link to kegg annotations (4324201)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019457818.1)
• Pfam: Protein phosphatase 2C (PF00481.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;