| Id Trinity | FTRINITY_DN58179_c1_g4_i6 |
|---|---|
| Name Transcript | Ll_transcript_78591 |
| Sequence | TTTCAAATGTTTGGCTCTAATTATTGTCATTAATCAAGTGATTCTAGTCAATAACATAATATTCATATTAGCAATTACTAAAACATTTGATAATGTTAGC CACTTCACATAATCATATGAAAAAAAATCCAAACTTTTATAATCAATTTTTTAAATTGAAAACCAATATTCAAACTTAAATTAAATACATACTTTCTGTA AATAAATATTTTCATTTATTTATACATATTTATTTTATTTTGGAGGGTAATGTTTCCCTCTCTTCTCTAGTCCCTCATTCTTGTGCTCCCAATTCTCAAT ATCCATCCATCCACTCACCCAGGTGTGAAAGTGAGAGGAACAAATAAGTGGGAGAGAAATTAGAGTGTAAAAGGAAGGAACTAAACCCTTTTAACAAAAA ATAGTTAGTGACTACTTTCTTCTTTTACATTATTTGGTTGGGACTTGGGAGTAATAATAATTACTACAGGGTTAGGTAGAAGAGGCTATGATGTGTTGCC TCAGATCCAGGAAAGTGTGTGAAAAAAGGTGTTATCTTTTTGGGGTTTCCTTATGATTCTCGAGACTTTGCTTTTTCTATGGTTGTTTCTCATGACCTCC TTTCTTCTTTCTTGTGTTTAGAGATAAGCTGTGTTTTTTTTATGTGGTGGGGTTTAATCATTTTTAAGTGAAATATGTTTTGTTGCAGATAAAGTTTGTT ATTTTCTATTTTGGTTTCAGGGTGTTTTCCTCTCACTAGATTTGACACTGGTAGATAGATACAGAAAGAGTTCAGAGGACAAGTTGGTAATGCTTGAAAA GGGTGTTAGCATGGCCATTCATTGTTAAAAGTTCCACAAATGGAAGTTTGGATCCGTTTTTGTTGACCGGATCTGACTATTCGATTTCACTTTCACCATC CATATCTGAATTTGCCTCCTTCGGTATTTTATTGGATTTGTTAGGAATCAAAAATGCTACCTTTTACATTACATGTTCATTTTCAATCAAAAAAAGCAGG TGAACTGTTAGTTGAAGTATGAAAGATTTTGTGATACCAGAGGGGTGGGAGGGTAACTTTTTTTACTGCCTAGATCGGGGTTTCAATGGAGGAATTGTCA TTCGCTGTTGCAGTGCCATTACGAGTAGGTAATTCAGTCTGTGATAATAATCCAACCGTAGCTACGACCCACATGGATGCATCGAGGTTTAAGCTAATGG GAGATGCAGGGTTGTTATCTAATTCTGTAACTAAGTTAGAGACAATTGCAAGTTCTGATGGTGGCCATAATGAAGTTGGTATAGCCAAAGTCACATTGCC CAAACAGGATAGGGAAGGAGATAATTCTTTGTTGGACACAATATCCAATAATAAAGGCAGCACTTTGGATGCTGGTGATGAAGCGTTAATCCCTGAAGTT GAGGAGGATGATTCATTATCATTGGAAGGTGATCAGATTATTGATAGTTCATACTCTCATTCGGCAATAAGTGCGAACAGTAGCTTGTGTGGGGAGGAGT TCATCAATTTTGAGGCTAATTCAGATGTCGGGAAACCATGTTCCATAGATATAGAGAAGAGCATATGTGGTGTCAATATTGTTGTCCGGCCTGCTGATTT GGGACCAAACGTCAAGACAGATATGATGAGTGAACCCCTTGCTGTTGCAGGTAGCCTTGAAGAAGAGACCGAAGTAGGATCTGTCTCTGAGCCTTCTGCA ACTGGTCTTAATCAGCAGGAAAAAGGAGGAAGTGGAACAGTTGGGCGGAGTGTTTTTGAATTGGATTATGCACCACTTTGGGGATTTATATCTCTGTGTG GAAGAAGACCAGAGATGGAAGATGCAGTTACAACTGTACCTCGATTTTTGGAAATTCCTATTCAAATGCTAATTGGTGATCGGGTACTTGATGGAATGAA CAAGTGTTTCAATCAACAGATGATTCATTTCTTTGGAGTTTATGATGGCCATGGTGGTTCTCAGGTGGCAGATTATTGTCGTGATCGTATCCATTTGGCC TTGGCTGAGGAAATAGAACTCGTCAAGGAAGGTCTAATTAGCGGAAGTATTATGGATGGTTGTCTAGATCAGTGGAAAAAAGCTTTTACGAATTGTTTCT TGAAGGTTGATGCTGAAGTTGGAGGAAAAGTTAATAATGAACCTGTTGCCCCAGATACTGTTGGTTCCACGGCTGTTGTTGCTATTATCTGTTCATCTCA TATCATAATCGCAAACTGTGGTGATTCAAGAGCGGTTCTTTGTCGTGGGAAAGAACCCATGGCGTTATCAGTAGATCATAAACCTAATCGAGATGACGAA TATGCAAGAATCGAGGCAGCTGGTGGAAAGGTGATACAGTGGAATGGGCATCGTGTATTTGGTGTTCTTGCGATGTCACGGTCTATTGGTTGTAAGCTGG TAGGAAATATGGCAATTTGATTTTTCTTATTTCTCGGGCCAAAGGCTGCTGGTAGAGGCAATTATTAAGTAGGACCCCGGTGCTTCCCTTCTTCACCTTT TTATGATGCCCCTTTTTGCATTAAACCAGATCTTAAGCAAAATTAAAATACTTCTTTTTTTCTTTCTAATTGAAAAAGATATGAATATCTGATTAACTAC AGTTCTGGCTTATTGTTCTTTGTAATGACTTTTACATAAGATAAGTTTGAGTAATTGTGATAGTGGAAACTGAATGATTTTTAGGGCCATATATAAAATC AAATTTCTTTCGGCCAGTGTAGTTTTCGCACCTATTACTTGTAATTCTAGGACAGTATCGAATTTTGCTAGTCTTTACTGGACCAAAGCCCTAAAGGAAA CCAAGTAGTGAAGTTTAATTCTGGGACTTCAATTGATAAAAGCAACAAAGCACACAGTTGTAATTTTCAGCTGAAACTATTTCTGCTTACCCTTTTATGT GACTTTCAGGTGATAGATATTTGAAGCCGTGGATTATTCCAGAACCAGAAGTTATGTTTCTTCCCCGTGCGAAGGATGATGAGTGTCTCATTCTGGCCAG TGATGGTCTGTGGGATGTCATGACGAATGAAGAGGTGTGTGACATAGCTCGGAGACGGTTACTTCTCTGGCACAAGAAAAATGGCTTGGAACTACCCTCA GAGAGGGGAGAGGGAATTGATCCCGCTGCACAAGCAGCAGCAGAGTACCTATCAAACCGTGCTCTTCAGAAAGGAAGCAAAGATAACATCACTGTCATTG TAGTGGATTTAAAAGCTCAGAGAAAATTTAAGACCAAGACATGATGATGATTTCTTCAACCGCTGCACTTTGGTTGTTTGAAGATGATTGTGAGATAGAA AGCTTCATATAATCCATTATAGTTTTGCCCATTGATTTTTCACAAGGGCATGCATCTCTTGGCTGAATGAGAATAGCACTATGTACTATAATACATTCAT ACACCTTCACTAGAACTCTACTGATTGAGTCTCCTTGTTCATTGTGTTACATTAGAGCTATGTAAATCTTAGCTAATTGTTGTAGGGATAGGAGATCAGT TCCATGCCTTTGAAATTTGTCAAAAATGTTGTATTCATTATTATGCCCCCGGGTACAAAGGCTCTGTGAGGTATTTACTGGATATTGTTTTAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_74848; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_78591
| Blastp | Probable protein phosphatase 2C 6 from Oryza sativa with 61.76% of identity |
|---|---|
| Blastx | Probable protein phosphatase 2C 6 from Oryza sativa with 61.76% of identity |
| Eggnog | Phosphatase(COG0631) |
| Kegg | Link to kegg annotations (4324201) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019457818.1) |
| Pfam | Protein phosphatase 2C (PF00481.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |