| Id Trinity | FTRINITY_DN58181_c3_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_78776 |
| Sequence | AGAAAGTATTACAAATTATGGTAAGGAAAATGTGGCTTTAACCCACTCCTTCTTCCCAAAGCCTCATCATTTCATTTCCCTATCACATTCTCCATTTTCA CCACAAAGCTCAAAATTCCCCTTTCTATATAACAAAAACAATTAAACAACAACACTGTTTTCTGCTTCTTCTTCTTCTGATCCGCGTGTACTCGCTTAAC GTTGATTCAATGGTTCCTCCTCCTACTACCTCGTTCTCGCGAGTGGAGCTAGCTAAATCGTGTGTCACTAAGGATTGGTCCAAAGCTATTCGAATTCTCG ATTCCTTTATTTCTCAATCTCCTTCAGTTCAAGACATTTGCAATCGAGCTTTTTGTTACAGTAAATTAGAGCTTAATAAGCACGTGATAAAGGATTGTGA TAGAGCGCTTCAGCTTGATCCTACCGTTGTTCAACCTTATATTCTCAAAGGTCATGCACTTTCTGAGTTGGGAAAGAAAGCAGATGCTCTATTGGTATGG GAGCAAGGCTATCAACATGCTCAGTATCACTATGCAGATTTGAAGCAACTGCTAGAACTTGAAGAGCTTTTGGCAGCAGCAAAACAACACAATGATGCAT TGTGTGATACGCATGGGCCGTCCATGCCACAATCTGAATCAAAGTCTCCAAGTGACGGGAACTCGAGTGGAACTTATAAGAATCAAGATGGCTTGAGTGC TCATGCTGAATGCGTCAATGGCAGTAATAAATCTGTGGTGTGCTTGAAGTCTACTGATAACTCTGACTCGAAAAGTGAATTGCATGATGAAGATAGAGGG TCTAATAAGTTCGGCGGCCAAGTGAATGGAAGCCCTGATGTCATTGATACGTCGAGTTACAATTCTGAATCATGCAATGACTCAAGTGATGCTTCTGATT CATGCGAAAAAGCATCTATCCATATTAGTCACTCAATTAGTGCCACTGAAATTCTTAGAAACCCAATTAGTAAGTTAATTTTTCCTCGTGAAAGAAAAGA TGAAGCAAGGAAAAATAAGAAGTTCTGTCTTGCTCGAATATCAAGCAAAAAATCTATAAGTGTAGATTTTCGACTTGCGAGGGGTATAGCAGAGGTTAAT GAAGGAAAATATTATGATGCCATATCCATTTTTGACAAGATACTGAAGGATGGCCCTGCATATCCTGAGGCACTAATTGGAAGAGGGACGGCATATGCAT TCCTGAGAGAACTTGATGCTGCTATAGCTGATTTTACAAAGGCTATACAATTTAATCCTATGGCTGGTGAGGCATGGAAAAGGAGAGGTCAGGCCCGGGC AGCTCTGGGAAAGTTTGTTGAGGCTATTGAAGACTTGACCAAGGCATTGGAGTTTGAACCCAACACCGAAGATATTTTACATGAGAGAGGAATTGTCAGC TTCAAATTTAAAAAGTTTGATGCTGCTGTTGAAGACCTTTCAGCTTGTGTGAAGCTAGATAAGGATAATAAGTCTGCCTACACATATTTGGGTTTAGCAT TTTCTTCAATTGGGGAATATAAAAAATCTGAGGAAGCACATAAGAAATCACTTCAACTTGACAGAAATTTCCTTGAAGCATGGGCACATCTGAGTCAGTT GTATCATGATTTAGCAAAGCCAGCAAAAGCTCAGCATTGTCTAAATGAGGCTCTGCAAATTGATGGGAGGTATGCAAGAGCTTATTATTTGCGTGGCCTC TTGTTCCATGCGATGGGTGAGCACAGGAAGGCTATAAAAGATTTGACAATGGGATTGAGCATTGACAGCTGCAACGTGGAGTGTCTTTATTTACGAGCTT CTTGTTACCATGCTGTTGGACACTACAAAGAGGCGGTTAAAGATTATGATGCTGCATTGGATTTGGAATTGGACTCAGTGGACAAGTTTGTACTCCAATG CCTTGCCTTTTATCAGAAAGAGATTGCTCTATACACAGCCTCAAAGAATAACAGTGATTTTTGCTGGTTTGATATTGATGGGGATATTAATGCACTTTTT AAGGAGTACTGGTGCAAGAAATTGCATCCAAAGAAAGTATGTGAAAAGGTTTTCAGGCAACCTCCTTTGCGTGAATCGTCAAGAAGGGGAAAGTTTAGAA AGCTGGAGTTTATTATTACAAAGCAGAAAGCTGCTCTTTTACAGGCTGCAGACTCCATTGGCAAGAAAATCCAGTATGATTGTCCTGGTTTCCTACCTAA CAGGCGCCAGCATCGCATGGCAGGACTTGCTGCTATTGAAATTGCACAAAAGGTCTCAAAGGCCTGGCGCTCCGAATGGAAACATTCTAATAAAAGCAAC TCAAAAAATGGAAAAAGGACCAGGAGAAGGGAAAGAATTAAAATGCCCAGTCAAAACAGGGGAGGTGCTGGTTGTAGTACAAGCAGTGCCTTCGAAACAT GTTCACGTGGCACTTTAGATGATAGACCATCTGGCCGTACCATGTCTTGGAAAGATGTTTACTCATCAGCTGTTAGATGGAGACAGATTGCTGAGCCTTG TGATCCTGTTGTGTGGGTTAACAAGCTAAGTGAAGACTTCAATTCTGGATTCGGCTCTCATACATCTATGATTCTTGGCCAAGCTAAGGTTGTCCGTTAC TTTCCTAATTACAAAAGGACATTGGATATTGCAAAAACTGTCATGAAAGAGAGGTCATATGTACACAGCAGAACAGATGAGATCATTAATCTTTCCAAAG ATGGGAAATTAGAAGAGATTATGCATGCAAAATCATGCTCTGATCTTTATAAAGTTGTTGGTGAGGACTTCTGGTTAACTACTTGGTGCAACAGTACTGC ATTTGAAGGGAAGCAGCTTGAAGGGACAAGGATAACACTTGTAAAAATGGGGGAACATGGTTTTGACTTTGCAATTAGAACACCGTGTAAACCTGCTAGA TGGGAAGATTTTGATGCAGAAATGACAATGGCATGGGAAGCTATTTGCGATGCTTACTGTGGTAAAAACTATGGATCTACTGATTTCAACAAACTTGAAA TCGTGAGAGATGCCATTTTAAGGATGACATATTACTGGTATAACTTTATGCCATTGTCTAGAGGATCTGCTGTGGTTGGATTTGTGGTTATGCTGAGTTT GTTACTTGCTGCCAATATGGAATTCACAGGAAGCATCCCACAGGGTTTACAAGTTGATTGGGAAGCCATTTTAAGCTTAGATCCAAACTCCTTTGTGGAT TCAGTTAAAACGTGGCTATACCCAACTCTGAAGGTGACAGCCTCGTTGAAAGACTACCCTGATATTGCATCAACTTTTGAAACAACAGGGTCAGTTATTG CTGCTCTCAGTTGTTTTGATGATTGAATGAATTCCTTTATAAATGGCAACCTCATATTTAGTCTAATTTTAAAAGGGCATGTTACATTGTAACATTTATG GATCATACAATAATGTAACTTATGTTTGTTATTCGTGTCTGTTAAGATCAAAGTTATGTGCAACAGTCATTTCCCAAATTTTCAAATCACTTTACATGCA GTTCTTTTTTTGGTACTACCAATGGTAACCTTTCACCCTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_74863; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_78776
| Blastp | Suppressor of RPS4-RLD 1 from Arabidopsis with 61.6% of identity |
|---|---|
| Blastx | Suppressor of RPS4-RLD 1 from Arabidopsis with 61.16% of identity |
| Eggnog | repeat-containing protein(COG0457) |
| Kegg | Link to kegg annotations (AT4G37460) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446848.1) |
| Pfam | Tetratricopeptide repeat (PF13432.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |