Ll_transcript_78925

• Id Trinity: FTRINITY_DN58182_c1_g2_i5
• Name Transcript: Ll_transcript_78925
• Sequence: AGAAAACCATACCCATAACAACCACATACAAAACAAATCACACGCTTCCACGTCTTCAAAAACCTCACGTCCATATGCGTCACCAACACCATCACCTTTC GTAATATAAATCTTCCAACGAGGGCAAACTCGTAAACCTCTATACCCTTTCTTCATTCTCCGTACACCTTTCTCTCTAACCTTCATTCCCCAACTCGGTC CCTGAACTCGCGCTGAGTCACCACCGGTCCCAGGCCGGTTCGATTCGGTTCAGTTTCATGGAGATCACTCACGATCACGAGCCACCACCATCGCCTTCCT TCGACGGAACCTCAATCGCCGCTGAAACTCTCGCAAACTCTTCGTCGTCGTCTTCCTCTTGCTCCTCCCCTTCCTCTTCATCTTCGTCGAAGGGAAAGGA GATTGAGGCGAGCGCGTCATCAACGGCGCCGCCACACGCTGCCGCGAAATATGACGACGATGACGAAGAGGAAGAGGACGTGTGCCGGATATGCCGGAAC CCTGGCGAAGCAGATAATCCTCTCCGGTACCCTTGCGCGTGCAGTGGTAGCATCAAGTTTGTGCATCAAGATTGTCTCCTTCAGTGGCTTAATCATAGCA ATGCTCGCCAATGCGAGGTTTTGCTGTGCTGCCACGCCAAATATGTCAAATAATTCCCTTTGAAATAAATGTTGTGTCCTTGATGTCTTGCTTCAACATG GTGCAGGTCTGCAAGCACCCATTCTCCTTCTCTCCCGTTTATGCAGACAATGCTCCAGCTAGGCTGCCTTTCCAAGAGTTTGTGGTTGGAATGGCAATGA AGGCTTGTCATGTTCTGCAATTCTTTTTGCGCCTGAGTTTTGTGCTATCTGTGTGGCTCCTCATTATACCTTTCATAACATTCTGGATATGGCGGTTAGC TTTTGTGAGGAGTTTTGGTGAAGCCCAGAGGTTATTCCTAAGTCATTTATCAACAGCCGTTATTCTGACAGATTGCCTCCATGGTTTCTTACTTTCTGCA AGCATTGTCTTCATTTTTCTTGGGGCCACTTCTTTGAGAGACTACTTTAGGCATTTGAGAGAAATTGGGGGGCAGGATGCTGATAGAGAAGATGAGGTGG ACAGAAATGGTGCTCGAATGGCTAGAAGGCCTCCTGTACAAGCTAATCGTAATATTGCTGGTGATGGGAATGGTGAAGATGCTGCTGGGGCACAAGGAAT TGCAGGAGCAGGTCAAGTAATTAGACGTAATGCGGAAAATGTTGCTGCACGGTGGGAGATGCAAGCAGCACGCCTTGAGGCTCATGTTGAGCAGATGTTT GATGGTCTGGATGATGCTGATGGAGCAGAGGACGTGCCCTTTGATGAACTTGTTGGCATGCAGGGTCCAGTTTTTCATTTGGTTGAAAATGCATTTACTG AGAACTTAATACCAAGCTTTACAGTCTCTACTCGAATAAGTATAGTTATGTGGTGCATTGAAACATGGCCTTAGTCTGCTTCTTTGGAGTAATGGATGAC ATGGTTTATTTATTGATGAACTTCCATCATTTCATGTGGATGGAGAGACTGAATATGAGTGCTTGCAGTTGCATGAACCTCAATGCCTTGTTGTCCTAAA ATTTGTTTTGGGTTGGTTTTTCATCACTTAGTTATTTACAACATGAACTGATGAACCGAAGCTTGACTATTTCACTTCTATGATTATTTTCCTATGGGTT TTGTCATTCTATTGATATAGCTGTTCATTTTTTATTGTAAGTTGCACCATCAATTCTTAAAGTTTAAGTATTTATCTCTGATAATTTTCCTGTGTGTTAG TCATTCCATTGATGCAACAGCTGTTTATGTTTTGTACATTGCATCTTGTTGTTTTAAGAAATTAGTTATTTTTCATCAGTTCATCAGTTCTTGTTGTAAA TAACTAAGTGATGAACCAAATTTCTATCTGATCAACCAAATTTCTTATCTACAACGTGAACTTAGTTATTTTTCATCCCTTTTAATTCCATGAAACAAAT TTGTTGTTTACCACATTTCTTATTTATAAATCAAATGCTCTGTTCTCTATGCAGGTGTTGGCAAGCAACATGATTTTCCTTGGCGTTGTAATCTTTGTTC CCTTCTCATT
• Tissue: flowers
• Gene name: LI_gene_74866;
• Additional information: details;

Expression of Ll_transcript_78925

FPKM

• FPAB: 0.5
• FPNAB: 0
• LF1: 0.3
• LF2: 0.1
• LF3: 0.1
• LF4: 0
• UF1: 0.1
• UF2: 0.1
• UF3: 0
• UF4: 0

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_78925

• Blastp: Probable E3 ubiquitin ligase SUD1 from Arabidopsis with 86.64% of identity
• Blastx: Probable E3 ubiquitin ligase SUD1 from Arabidopsis with 82.76% of identity
• Eggnog: (Membrane-Associated Ring finger (C3HC4))(COG5183)
• Kegg: Link to kegg annotations (AT4G34100)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423520.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;