Id Trinity | FTRINITY_DN58197_c4_g1_i3 |
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Name Transcript | Ll_transcript_81089 |
Sequence | TGAAATCATGACATGTGTCTTGTTTTATCATTTTCTATAAAAATATTTCTAAAACTAAGCTAAACAGTATACGTGTCATACTTTTATTGGCCGGAAGAGA TAAGTTATCTCCTGGCATGAAAAGATACATTATCATCTTATTTAAATTAGGACAAAGAGATAAATAAACTGAAATAAGTGGTCTTCTTTTTTTTTTTTTT TTTTGGTAACTCTTCAATTCTTGTTTTCCACTCAATTATTATTGTTTGACTACTTGTTGAAGAAGGTGACTTTGATACAATTAAGGACATTTTACATGTT GATTTGGCAAGAAGTTGTAGATATATATTTCATGACAATACAATCACAAGAAAATAAGCATATACTCCCATATACTATTGTAAATATCTTTCAATTGATA GTTATTTTCCACAAATTGCCTGGGTTACATGATTAATAGTTATTGGTATGCAGATGTGTGCTCTTATATTTGTTGGAACAAATGGTGAAACTTACTTCAA CACAGTTTCTCTTGTGTCTTGTGTACAAAATTTTCCGAAAAGCCGGGGTCCTGTGGTTGGAATTCTAAAGGGATTTGCAGGGTTGAGTGGTGCAATCTTG ACACAAATATATGCCATTTTCCATTCCCCTGATCATGCATCATTGCTTTTTATGGTTGCTGTTGGTCCATCATTGGTAGGAATAGGTCTAATGTTCTTTG TTAGACCGGTAGGAGGTCACAGACAAGTTCGGCCATCGGACGAAAAAAGCTTCACATTTGTCTATGGTGTTTGCCTTCTATTGGCTGCTTATTTGATGGG AGTTATGATTGTCCAAGATCTAGTTCCTCTGAATGAAATAGTTATCACAATGTTCACAGCTATTCTGTTTATGATCCTACTTATTCCTATTGTAATTCCT ATCTCATTGGTTTCTAGTCCAGATCAAAGACCTATAGAGGAAGAGACGCTTCTTCCGGAACAACAAAATAGTGAGCCAGGACAATCTCAGCAGTATTCTG ATGAAGTAATATTAAGTGAGCTTGAAGAAGAAAAGCCTAAGGAAGTGGACTTGCTTCCGGCTTTAGAAAGGCGAAAACGTATCGCGCAATTACAATCGAA GCTACTCCAAGCAGCTGCAAAAGGAGCAGTGAGGGTAAAGAGAAGGAAAGGACCACATAGAGGGGAGGATTTTACCTTGACACAAGCATTGATCAAAGCA GATTTTTGGCTTATTTTCATTTCCATGGTCTTGGGTTCTGGATCCGGGTTAACTGTTATCGACAATGTTGGTCAGATTAGCCAGTCTCTAGGATATCACA ATATGCATATATTCGTCTCTATGATCAGTATTTGGAACTTTCTCGGACGAGTCGGAGGTGGTTACATATCTGAGATTGTTGTGAGGGATCATGTATATCC AAGACCTATTGCACTAGCTGTATTTCAACTTATTATGACTATTGGGCATGTTTTCATTGCTATGGGATGGCCAGGAGCAATGTATGTTGGAACTTTACTA GTTGGACTTGGTTATGGTGCTCATTGGGCCATTGTTCCAGCAACAGCTTCTGAGTTATTTGGTTTGAGAAACTTTGGTGCATTGTACAATTTCATTACTC TAGCAAACCCTGTAGGAACTCTTGTCTTTTCTAGTCTCATTGCAAGCAGAATCTATGACTCAGAGGCCGAAAAACAAGCTCGTGATGGCCATCGCGACAA TCGGGGTATAGGATCATTTATGTTCGGTTCGATTAATGCTGGTCAGCCACTAAAGTGTGAAGGTTCTATATGTTTTTTCCTGACTTCAATTATCATGGCA GGATTATGCATTGTTGCATCAGGTTTATGCATTATTCTAGTATTTAGGACTAAGATTGTTTATGCCAACCTATATGGAAAATCTTCTAGTAGTAGGCTTA GATAATAAGAGTTTGGACTAAGTATTTTGCTGCTATAACATTGTTGTGTATATTTTTCCAAACATTTATGTGTTGTATTCTTTCCTTTTGTGAGATAATT TTTCATTGGTATAAGAAAAATCATTATTGCTTTTATCAGTAGTGGTGCTAAGATTATGCACTGTATCTAATAAGTTATATCATAGTTGCAAAATGCCTTG TACTTGGACTTAAAAGGTTGTGATTGATGATTTACTAGATATTGGTGTTCAATTTATTGTGTATAAGACTATACGAGGAGATGAGGATCACATGTC BLAST |
Tissue | flowers |
Gene name | LI_gene_75009; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_81089
Blastp | Protein NUCLEAR FUSION DEFECTIVE 4 from Arabidopsis with 22.08% of identity |
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Blastx | Protein NUCLEAR FUSION DEFECTIVE 4 from Arabidopsis with 26.36% of identity |
Eggnog | Nodulin-like(ENOG41105RT) |
Kegg | Link to kegg annotations (AT1G31470) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019438652.1) |
Pfam | Nodulin-like (PF06813.12) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |