Ll_transcript_120910

• Id Trinity: FTRINITY_DN58207_c1_g1_i12
• Name Transcript: Ll_transcript_120910
• Sequence: ATTTTATCTATAAATAAATAGTAGTTTAAATGTAAAAAGCGTAGAAATGAGGAAGTCTTATTTAAAAATAACCTAAATTGATGTGCACAGTTATTTTGTA CTTTGGGATTGTGAAGACATGAATGTTTGAAGTTTGAAGTGATTCATTGATAAAGTGCACGTTAACGGTTGTTTAAAATTCCTGAATTGACCTTTCCAAT TTCCCATAACTCAAATCAAAACAAAACCAAACCCTCTTTTTCTCACTTCCCTAATTCATCTTCTTCCAATGGAAGACGACGACGACGAGTTCGGAGATTT ATACTCCGACGTCCTTCCATCGTTCCCTTCTTCCTCTCCGCCTCCGATCTCCACCGCCGTCGAAGTCCCCGAATCAGCTCCACAACAACATACGCAATTA ACACATGTGGATTTGAACCCTACTAAGGAAAAGGAAACCCACGCTGATTTCATCGATAATGATGTCAAATTTGATATCGAGGAAGACGATGAAAACATTG GAATTCCCTCTCTATTTACCGATGCTGCTGGTGGTGGTGGTGGTGGTGGCCATGGCGATGGTGTTGAAGCTTCTATAAGAATGGACGATAGAGGCGAGGG TGATGATGATTGGGACAGTGACAGCGAGGATGATTTGCAGATAGTGTTGAATGACAACAATAACCTTATGGCCATGGTTGATGATGGCGGCGGAGGCGAA GATGGTGGGTTGAATATTATGGCCGGTGGTGACGCTAATCAGGATGCGGCAGCCGAGGAGAAAGAATGGGGGGAGAATACAACACAACTGGTGGATGGTG AAAGAAAGGATCTTATAGGAGAATCATCTAAAGCCAATGGAGTGCCGCTAAAAATTGGGTTCAGTCATCAAGGTTATCACCCATTTAAGTATGTCCGGCC CGGTGCAACACCAATGCCTGGAGCAACTATTTCTACTCCTGGAGGACCTCCTGGCCAGATTCGTCCACTTGCTAACATGAATCCCATGGCTGGTCGTGGC AGAGGGGAATGGAGACCAACTGGAATAAAAGGTGCCACTGCCATGCAAACAAGTTTTCATGCAGGGCGGGGTTTTGGTGGTGGATTAGAATTCACACTTC CTTCCCACAAGACTATATTCGAGGTTGACATTGATAGTTTTGAGGATAAACCATGGAAATACCCTGGTGTTGATGTATCAGTTTTTTTCAACTTTGATTT GAATGAGGACAGCTGGAAAGATTATTGCAAACAGCTGGAGCAATTACGCCTGGAGTCTACAATGCAGAGCAAGATCCGAGTTTATGAGAGTGGTCGCAGA GAGCAGGACTATGATCCAGATTTGCCACCTGAGTTGGCTGCAGCCACTGGTACACATGATGATCCTGTTGCAAATGCAAATTCTGTAAGGTCAGATGTTG GACAAAGTGATCTCATTAAATGTTCTGCACGCGTACGACCACCAACAATTCCAACTGGAAGAGCAATACAGGTGGAAAGTGGTCATGGTGACCGTCTTCC TTCTATTGATACCCGGCCTCCTCGAAATCGTGATTCAGATGCAATAATTGAGATTGTGTTACAGGATACACCAGATGATGATTCCTCTGCAGAAATTGAT GTCCAAGACCAACCAGAGGATGGAGAACCACAAAAAGAGGATTCTACAGATGATGACCTTGTAGTTGGAGAGGAAACTCCAAGGTTGGAACCTGAGTATT TTGATGGTTTTCCACCAGATTATAAAGGTCAAAAGGGAGAACTGGCAGAAAGAAGGATGCCATTGCTGAATTCCAGTCCTGCTCACATGCCTGATGAAGA TGAAAATTTGCCTTTCCCTCAAGAAGAGACAATTGATTCTAGGTGCCGAACTGCCAGGCAGACTGAAGGAAGAGTACATGGTCAATCTCCTAATATTACT CCTAGTCAAGGAATGGCTATTGTTGATAATAAAAAAGAGTCAGTTGATAGAACGGAAGGTAGACACAATTCACTTTTGTCATCTCCTGTCATTAAGGATG CATGTGAATCTAGTGTGGAGAACAAAGATGTGGAGCTTAAGGAGACTGAGACAGCTGATGGAAGTTCCATATTGGAAAAGGAGGACATTGATTTAAATAC AGTAGGCAAAAGAGATACCCTTAAGGATGAGGTAGAAAAAAGAGAGAAATTGACATCTCAGGTTGAGCATCCTTTGCTTGATGAAGTTAATGATTGGGAG GATTCAAAAGCTGCATGTAGTGGTAACAGCGAAGCAAGATCGGCAAGTAGCCAGGACAATCAGAAGCAGCTAGAGGGTATTGAAGTAGTTCAGGATCCAA GGTCAGTGCATTTAATTAGCATTAGAAAGCAACACAATGAAAATGGGCAGGTATTCCATAGAAGAGATCATGATAGTAGGCAAGAACCTGAAAGAAATCA TATGGTAAGAAAAAGTAGAGAGGAATCATACCCTTACAAAGACTGGCATCCTAGCTCAGCTCATCAATTGCACACCAAGATTGATGGATTTGATAGGAAC AGAGATAGGAACAGTTTTAACATGGATTGGGCACGAAGAGAAGATGATCTTATTAGCAAAAGGGTTAGAAATGATGATCCTAGAAAGAGGGATAGGGGTA AGGTCAGAGGAAATGAGAGAATTGACAAAGATGATGACCTCCATTCAAGAAAAGAGTTGGATAATGGTAGCTACAGGGTTCCCTATGATATGGAACCAGG AGTCTTAAGAAATAGGGAAAAAGGTGATGGCTTGAAGAGAAAGCATGAAGCTGTGGAGGATTTCCATAGCAAGAGGAGGAAGGACGATGGATATATTAGG CAGGAGCATATAGACAAAGAAAAAATTCTGCATGGTTACAGACAAAATGCCAATCGGCACAGGCGAGGAGATAGAAATGAAGTGGATCTACATGACCATC AAAGAAGTAGAGAAAATGTTGATGATCAATATGCTGTTAAGCAGAAAGATGAGGCCTGGCTACTGAGGGAGAGGAGTAGCAGACAGAGAGATAGAGAGCA GTGGCATCGGGGGAAGCAGTCCCATGAAGAACAACCATCCAAGCGTGAAACAGAAGGCTGGATTTCAGTTAGAAGTGGACAAGGAGCTGAAGAAAAAACA TGGGTTGGGCATGTTAGGGCCAAAGATGAACGAAAAGTTTCTGGGAGAGATTGCCAATCTAGAGAAGCAATGCAACACAGTGACCAATTGAAAAGAAGGG ATCGGATTCAGGGTGAAAGTTCACATCATAACGGGAGTGATGAGGTTAATGTCCATGGAAATCATTATAATAGCGAGGAAAGAATTTCACATCATAAGGG GCGTTATGATGCTTATGCCCACGGAAATCAGTATATTAGTGAGGAAAGGCGATCTAGGCAGGAAAGGTCAAGTAGTCATAGTGGTCGTGTTGCTAATGCT TCAGATAACCAAATAGTTAACGAGAGAAAGCGTAAAGAGGGTTCAAGGAAAAGCAAAGAGCATGTTGGTAGTTCTCTAAGTAGTATACGCATGTCCAAGA GAAGTCAAGAAAATCGAAGTGGTGGTCAGATCAATGAGAAGGGCCTGAAAAGCGCTGGTGATGAAAAACATGTCGAGGATGAAATTCAAGGGAATCATCT TTCCAGAAAACATCGCAAAGACATTTCCACTGATGATGAACAGCAAGATTTTCAAGGAGGACACTCTAAATTGGAACGATGGACAAGTCACAGGGAAAGG GATTTCAGTATTGGTAACAGGTCATCATCTTCCTTGAAGATCAAGGGCATTGATAAGGATAATAAAGATGGGTCTTTTGAAGATGGGAAACCTGCAGATG AATATGCTAATATATTTGATGCCGATAACCAACAGCTCTCGTCTGTTGAAGGGAAGGACTTTGCAGATATGGAGAGTAAGAATGACGATACCAAAGGATT TGGGGATCAGCACCTTGACACAGTTGAGAAGTTGAAGAAGCGTAGTGAGCGGTTCAAGCTTCCAATGCCAAGTGAGAAGGAGGTCCTAGTTGTAAAAAAG TTAGAGAGTGAACCACTGCCTTCTGCTGCCAAAAGTGAAAATCAAGCAGATTCAGAGGTCAAACAGGAGCGGCCACCCCGAAAAAGGAGGTGGATAACTA ACTAAATGAGAAATCTGGGGCTAACAGTATTTGTCTGGAAGTCTAGTCTAGTTTGGCCCCAAGGAGAACTTCTGCTTCGATTGATTTTCTTAAATCTAGA GCCCTCCTCGTGCAGCCTTTAGTGTTTATTGATGGAAATGGCATCCATAGGGTATATGACGATGTGTACTTCTTCAGTAGTTATGTCAATTGTAACCATG CTACAAATACATTTATTATAAACTATGTCTACAGGAAAAGTGTAAAACTTGAACTGATCACTACAGGTAGCACACTTTTTGGGCGTCCAAATGTGGCTCT TAACTTGGATTTGGTATGGGCTAGAGAGATTATGTGATACTTGGCTAAGGGTGGATGTAATATGACTCTTTCAGAAGCTGTTGCATGGCTGGTGTGGCAT GAGCCTGAAACTTGCACTTTCTCCTGTGGCCGAGGAAGTCTGAACGTTAGAGCAACAAGATATACCTCCTGGCTCCTGTAAAAAAATGTTTTCCACTCAT GTTTTCTGTTGGATTATAGATGTCTGGGATATATTCTTTGTTGTAGACTGTAAGCAAGTATTTATTACTCTTTTTGCAGACATTTTTCTTATCATTCTTA CACGGGAATCACAAAACTTTAGCGCAGTGTTTACAATATCTATAGACCATATGAGCTGTAGGAATTTCAAAAGCAATGAAAGAGGTTATTAGTAAAATTA TTGCCCTTTCC
• Tissue: flowers
• Gene name: LI_gene_75080;
• Additional information: details;

Expression of Ll_transcript_120910

FPKM

• FPAB: 6.2
• FPNAB: 4.5
• LF1: 4.2
• LF2: 4.9
• LF3: 5.5
• LF4: 3.6
• UF1: 3.7
• UF2: 5
• UF3: 4.4
• UF4: 3.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_120910

• Blastp: FIP1[V]-like protein from Arabidopsis with 44.44% of identity
• Blastx: FIP1[V]-like protein from Arabidopsis with 46.49% of identity
• Eggnog: mRNA processing(COG5213)
• Kegg: Link to kegg annotations (AT5G58040)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441257.1)
• Pfam: Fip1 motif (PF05182.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;