Id Trinity | FTRINITY_DN58210_c1_g2_i1 |
---|---|
Name Transcript | Ll_transcript_118449 |
Sequence | CGAGTGGTAAGTTTTTCGACATGCGTGTTTCTCTCTCTCTCTGTGTTCCTTCACTTTATTCCCACTCTCTCACTTTCAGATCACTCCTTCTGCTCTCTCT TTCCCTTCATTTCTATTCAAAGTTTGAAACTTTGATATATATATGAATGAATACATTACTATACTATTAGGGTTATTCACTCTCTCTTCTAAGAAAGAAA CTACATCACTTTTCCCAAACTACCCTCTATTCCTTCCTTCTTTCTCAAGCTCCTCCTCCTCCTTCTCCCTTTAGAATCAAAACTTCTAACTTTTATCCTT TCACAATCACAATGAGCTTTTACCCAAACAAGTTTTAAATGAAACCCCGTGAATTATGGCATAGAAGTTAGAACTTTGAACAACACAACAAAGTGGTGGG GGTTTCTGTTTCATACACAGACAAAACTTTTGATTTCTGTGTGAACTCAAAAGCTGTTGTTTTTTCACGCAGGTTGTTTTGCTCTTGTAGTTTAAAGCTG TACACTTTTTTGGGTTCTAAGAAACGCATATTTTCTCTTTAATTTTGGAACTACTCGCTTTCAAATGCAGTTTCACTTCTTAGCTGGTTGCAGAAAAATA CAATATTTTCTGTCTTTATATACATACCCTTTTGCTTTATAAGCATTCCTTACCAAGCTCAAAGAGTTACAATTACAAGAACCTTTTTTAGCGTTGTTGG TGAAGTGCGTGATTGTGACTTTTATTTGAAGAAAATGGCAATGGCTATGACTCAACACAGAGAGAGTAACAGCAGTGGTGGGAGCAGCATTGATAAACAC CTTGATTCTAGTAAATACGTGCGCTACACGGCTGAGCAAGTTGAAGCTCTTGAAAGGGTTTACACAAAGTGCCCCAAACCCAGTTCCATGAGAAGACAGC AGTTAATCAGAGAGTGTCCAATTCTCTCCAACATTGAACCTAAGCAAATCAAAGTTTGGTTCCAGAATCGTAGGTGTAGGGAGAAGCAGAGAAAAGAGGC TTCACAGCTTCAGACCGTGAATCAGAAACTGACAGCAATGAACAAGTTGTTGATGGAGGAAAATGATCGGTTGCAGAAACAGGTGTCACAGTTAGTATGC GAGAATGGCTATATGCGGCAGCAATTGCATACTCCATCAGCACGAGCTACTGATGGAAGTTGTGATTCGGCGGTTACTACTCCTCAGCATTCTACGAGAG ATGCTAATAATCCTGCTGGATTCCTATCAATTGCAGAGGAGACTTTGGCAGAGTTCCTTTCAAAGGCTACAGGAACTGCTGTCGACTGGGTCCAGATGCC CGGAATGAAGCCTGGTCCAGAGTCGGTTGGGATCTTTGCCATTTCACAAAGTTGCACAGGAGTGGCAGCTCGTGCCTGTGGTCTTGTTAGTTTAGAGCCT ACAAAGGTTGCGGATATCCTAAAAGATCGTCCATCTTGGTTTCGAGAGTGTCGGAGTCTAGAGGTTTTCACAACGGTCCCTGCTGGAAATGGAGGGACAA TTGAACTTGTTTACACACAGACATATGCTCCAACCACACTGGCTCCTGCCCGGGATTTCTGGACTCTGAGATACACTACAGCTTTAGGCAATGGCAGTGT TGTGGTTTGTGAGAGGTCACTGTCCGGCTCTGGTGCTGGGCCTAATGCAGCAGCTGCATCGCAGTTTGTCAGGGCTGAAGTGCTGTCTAGTGGTTACTTG ATTCGACCATGTGAAGGTGGAGGATCAATCATCCACATTGTAGACCACCTAAATCTTCAGGCATGGAGTGTACCAGACGTGTTGCGACCACTTTATGAAT CAGCAAAAATGGTAGCTCAGAAAATGACAATTGCGGCACTTCGCTATATCAGGCAAATAGCCCAGGAAACTAGTGGTGAAGTGGTATATGGCTTGGGTAG GCAACCAGCTGTTCTGAGAACTTTCAGCCAAAGGTTGAGTAGAGGCTTCAACAATGCTGTCAATGGATTCAATGACGATGGCTGGTCTGTATTGAACTGT GGTGCTGTAGAGGATGTAATCATTACAGTCAATTCCACCAAGAATTCGATTGACACTTCTAATCCAGCTAGTTCCCTTACTTTCTTTGGAGGAATTCTGT GTGCAAAGGCTTCTATGTTACTCCAAAACGTCCCTCCATCAGTTTTGATCCGCTTTCTGAGGGAGCATCGCTCGGAGTGGGCTGATTTTAATGTCGATGC ATATTCTGCTGCTTCACTTAAAGCTGGCTCATATGCCTCTCCTGAAATGAGGCCTATAAAGTTCACTGGCAATCAAATAATCATGCCACTTGGTCATACA ATTGAACACGAAGAGATGCTAGAAGTTATCCGGCTTGAAGGTCACTCTCTTGCTCAGGAGGATGCTTTTGCTTCTAGGGACATTCATCTCTTACAGATAT GTAGTGGAGTTGATGAAAATTCAGCAGGGCTTTGTTCTGAGCTCATATTTGCTCCAATCAATGAAATGTTCCCAGATGATGCTCCATTGGTGCCTTCCGG TTTCCGCATTATCCCACTGGATTCAAAACCAGGTGGTAAAAATGATGTGACAACTGCAAACGAAACCTTGGATTTGACATCTGGTCTTGAAGTTAGCCCA TCAACAAACAACGCTGATGGAGATGCATC BLAST |
Tissue | flowers |
Gene name | LI_gene_75102; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_118449
Blastp | Homeobox-leucine zipper protein REVOLUTA from Arabidopsis with 81.72% of identity |
---|---|
Blastx | Homeobox-leucine zipper protein REVOLUTA from Arabidopsis with 81.72% of identity |
Eggnog | Homeobox-leucine zipper protein(ENOG410ZJBV) |
Kegg | Link to kegg annotations (AT5G60690) |
CantataDB | - |
Mirbase | cln-MIR166 (MI0022568) |
Ncbi protein | Link to NCBI protein (XP_019458095.1) |
Pfam | Homeobox domain (PF00046.28) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |