| Id Trinity | FTRINITY_DN58213_c3_g1_i33 |
|---|---|
| Name Transcript | Ll_transcript_118304 |
| Sequence | GTACGCTATCCTTCCCCTAATAATAATATTCTCCTGTTTGGTTACTCATAAATTCTCATACAAAATTTTCCATCTCTTTCTCGATCTCCGCTTAATCCGT TAAATTCACCTCGATTTTCTCTCCCATTATAATTTGAGGACAACGACTTTCAAATCTCGCAGTTTAATTAACCGTTGAATCTTTACGCCTTTATATGATA GCAATTTTTAGATATTGGGTTGTTGAATATCTCTGCATTTGTCATCGGATTCAAACTGTTAGGGTTTGTTAGGGTTTTTTAGGGTTTTCAATCTAATTCG AGGGTCTCATGTTTGATATTTTGTTTCTTTGTTAATGGAAGCGGTGTGTTGTTGATTTTGATAGCTTTATTGAATAATTGTGTTCATTGAATTAATTAGG TATTTGTTAGGTGATTTTTGATCTTTTCAAACTAGGGTTGATGGCTGATCGGACTTTAGCCGTTGTAAAACCGATTTGGATGAAGCAAGCCGAGGAGGCC AAGATCAAGAGTGAGGCTGAGAAGGATGCGGCAGCAAAAGCTGCTTTTGAGGCTACATTCAAAGGTTTGGAGAAGAATTGTGAAAGGGGAACTGTTTTAT CAGACAGTGAATCTGAAGAGTATGAGGATTTGGTGAAGAAGCCGATTGGGCCGGTTGATCCTGCAAAGTGTACTGCTGCGGGTACTGGGATAGCGGGTGG AGCAGCTGGTGCCCCGTCATCATTTACAGTTGTGACCAAGGATGCTGATGAGAGAAAAGTTTCGACTGGGGGTGCGCTGATTAAGGTGAAGGTGGTGCCA GGATTGGGTGTCGGAGGGGCGGAGCATGAAGGTGTTGTGAAGGATATGGGTGATGGGACTTACACTATTACTTATGTGGTGCCCAAGAGAGGGAATTATA TGGTCAATGTTGAGTGTAATGGCAAGCCAATTATGGGTAGCCCATTCCCTGTGTTTTTCAGTGCAGGTAGTAGCAGTGGTGGGCTGCTTGGTTTAACTCC TGCATCTACATTTCCAAATTTGGTTAATCAAAACCAAACGACTATGCCCAACATGCCGAATTATTCTGGGTCTGTTTCAGGGGCATTTCCAGGATTATTG GGGATGATTCCAGGGATTCTTGCCGGACCTTCTGGGGGTGCTACTTTGCCTGGATTTGGGGCCTCACTAGGGGAGATTTGTCGCGACTACCTTAATGGGC ACTGTGCAAAAGCTGATTGTAAGTTGAATCACCCACAACATAATTTGTTAATGGCTGCCTTAGCTGCAACAACCTCAATGGGAACACTTAGCCAAGCTCC TATGGCGCCTTCTGCTGCTGCAATGGCTGCTGCTCAGGCAATAGTTGCTGCCCAAGCCCTTCAAGCACATGCAGCTCAGTCAGCAAAAGATTCAACTGCT TCACCCGATAAAGCTAGTAAGGATGACACATTGAAGAAAACTCTTCAAAATACTCAAAACCTGAAGAGGCAACTGCCGCTCTGGCATTAAATAACATAGA TGTTCGGGGGCGCCCTTTGAATGTTGAAATGGCGAAATCACTCCCGCAGAAACCATCTCATGTAAATTCTTCACTGGCTTCATCCTCGATTCCTTTGATG ATGCAGCAAGCTGTTGCAATGCAACAAATGCAATTCCAGCAAGCACTTCTTATGCAACAAACTATGAATGCACAGCAAGCTGCTAACAAAGCTGCAACTA TGAAATCTGCCACAGATTTAGCAGCAGCCCGGGCGGCAGAAATAAGTAAGAAATTGAAAGCTGATGGAGTTGGAATTGAAGAGAAAGAGACAAAAGAGAA ATCCAGACATAGTAGAGTTATGTGTATGGAAGCTAAAAGAGGGCAGCAAGAATAATTAAGATCACCTTCTCCCCCTCGTGGCAGATCTTCACCAAAGTCT AGATCTCCTGTCAGTTACAAGAGAAACCGGAGGTCTCGTTCCTACTCACCTCCTCGCTTCGCTAAGGATCATCGGTCCAGATCACCATTGAGGTTCCATC ATCATTCTGACTATGAAAGGGAACGGCGGTCCTATAGAGACATCAGGGAACATAATGATAGAACTAGAAGACATGATTCGTACAGATCACGTGATCATCA TTCATTTTCTTATAGAAGAAACAGGAGTAGGAGTGTGAGCCCACATGCAAGGAAATCCTATCGTACCGAGTCTGTTTCTCCAAAACGTCGCACAGAAAGT TCACCTCGTAGAGGAAGGAAACCATCACACGCCGATTCTGGCTCTCCAGGTCATCGGAGAGGAAGTAGGTCATCTCCAAAGATTGATGAAAGCAAACTAA GAAACAGTAGGCGTTCAAGGTCTATATCATCATATGATAAGCTTCATTCTTTAGGCAAAAATGAAGAAATCTTGCATGGAAGGTCTAAACATAGAGAAAG AAGGGGGTCGAGGTCAGTATCTGTGGATGAGAAGCGTCACCGGAAGAGCCGATCCTCCCCAAGAAGAGTCGATGAAAGTAGATCCAGGCCCAAGAAGCGA TCCAGGTCAAAATCTGTGGATGGTAAGCACCATTTTCCTGAGAAATTGGATGAAAATAGAAACAGAAGACACAGTGATAAAAGGCGCTCCAGGTCAAGAT CTACAGAAGATAGGGATCAAACTGATGAAAGAGAGGATAAAATAAAAAGTGACAAGGCAAAGCGATATGATACTAAAAGGACCAAATCACAATCTTTTGA AGAGAAGCATCATTCTAAAGATAAATCGGGCGAAAATAAAGAAAAGAAATCAAGGCCCCGGAGGCGTTCGAGGTCAATATCCGTTGAAGAAAGGCATGAC AAAGGAGGCTCTTCATCCAATAGAAATTTGGCTGAGAGCAATTCTGAACAGAGACCATTCAGGTCAAAGTCCCCTGAGGGCAAACACTCCAGTGATAAGT ATGAAAGTAAAGATGAAAGATCAGGGCATAGAGAGAAAGTCCCATCTAAGTCAAAAGTAAAAAATCATAAACAATGTGTTGGGAGTGGGATCTCCCCAAG AAATTTCAAGGAGTATGAATCACAAGGAATTACACAATCTTGTTCTGGATCTGCAAAAGGTAAGCATCATTTGAATGATGGAGAAAATGCTAATTGTGAA GAACATTCAGAACTCCATGAAGATGCCATGCAGGAACCAATTATAAACGTGAGGAGTTCAACCAACCTGAATGGTAATAGGATTTTGATTTCAATGAATG ACAAGCGCAACTTAGAAGGATCAACCAAAAATGAAGGAGCTGATGATAGCGCAGAGTGGAGGTCCATCGAAGAAGTGGAAACTGGAAAATATTAAGCCTA CTATGCTTGAAGTGGTGATTTAAATGGTTCTAAAGATTCAACTGGCTTTTGACAATGCTAACAACATAGCTGAGTATAGATTCCTGTTATTTCTTCTTGA ATCGGAATAAGCACTGGCAAGATGAGGATAAACAAAGTTACCGTACTCATAAATGCTGATCAGTGAAAGATTTCATCCAAGGCTGATATGATTTCCTGAA CAAGTTCTTTTTAGGGAATAGACTGTTTCTTTTTAGGAGAAGCAGAATTCTCAGGAGGCTTCCACTATTTGGTTTGACCCCCAGAACTTCTCTGTTGGCT TATGAACATCTTCGATTTTTTATTTCAGTTTGCAGGTGGTTTATAACCAAGATGGGACATAGAATCTCTGGGGCTGTTGATGTAGCTCAAGGTTTCAAGA ATTGTCCTGCTTTTATCATGACCAACATGCAGTGCTTATATCATGACAAACCATGCGGTGCTTATATAATGGTTCTTTTACTGCTTGATTGATGTATGTT GGAATGTTATCTTAAGTATACTATTCTTCTTTTTTTATTAACATAGTTGTGTTTTGCAATGTTTGGGTCTTGATATCTATATTGATGGAATCTGAATGTT TTTGGTTTCTAGTCCTCCAGAAGTTATGATAGTGAGTTTTATCCACCGTCCTGATTATATATGCATCTAAAACTTTTTGGATCAAGGTTGCAATATTGTT GTGTTAAACTGAACTTTCTACAATGATATTTTAGTTCATCCTCCCTCTTGTCTGTGTTATATATAGATTCTATATACAACTTACAAGCATCATACCTTGA TGTGGTCAACCATTGACTCCCTTTTATTTTCTCATATTTAATCGTACGGTGGGGCTTGTTATACCCAAAACAAATGCAGGTATTCACATTGAAATCATTT GGAGCTTTGAGATACAGTTTCGCAAGGTTGAATTTCTCATGTTAATGAAGGTATGCAGTCAGATTCTGATGCTCTGTGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_75122; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_118304
| Blastp | E3 ubiquitin-protein ligase TRIM71 from Danio with 38.6% of identity |
|---|---|
| Blastx | - |
| Eggnog | nhl repeat containing protein(ENOG410XSQC) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463292.1) |
| Pfam | Filamin/ABP280 repeat (PF00630.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |