| Id Trinity | FTRINITY_DN58220_c1_g2_i10 |
|---|---|
| Name Transcript | Ll_transcript_120414 |
| Sequence | TTTTAATTGAGTACACTTCTATAAATAAATTTAATTAAGTACATGGATTAGATGAGGGTAAGCTTAGGCGCAACGGTAAGGTTGCTTGCCTCGTGGCCTT GAGCTCATAGGTTCAAATCCTGGAAACAACCTATTCGTTTGAGGGTAAGGTTGCACAAATCTACTTTCTCCAAACCCTACTAGATGGGAGTCTCCTGTAT TGGGCTACCTTTTTTACATGGATCGGATATTGTTGGGTACACCTAGGTTCAGATTGTTCCAAAACTACGTCATTTTTGGCTAGGTACTTGTGACTTTTTC CTTGTTTTCTTCCCAACCTAACAATGATGTTGAATTTGAGCCATTTAATTAGTCTCTCACCCATAAATCTCACAGCTGATTTTGGGCATCAACCTCTCAT CTTGTGACACTTGCATTCCTTGTCGGCATCTTAGCAATATTTCTTCATTCAAGAAGTTGATCCTTACCTTTTGGATTAGAATACGTTGAATGGTGAGGAT TTGGAGCAACTCTTTTAAACTCATTCTCGGTGTGCAGTTTTTGCTATTATTTGGTGTATAAGGTTATAAAGGATTCATATTTTTTTAGAGATTCTTTCTC CACTTTAGATTTTTTTGGCATCCCTTTGGTTCTCTGCCCATGGACTTTTTTGTTGGTTTCTATTGTAGACTTGCAAAGGGATTGGAATGCTTTGATGCAG AACTCTATCTCCTAGCATAGTGGTTCCCTTTGTTTTTGTTTTTTTTTTGCAAGGATTTCTTATCACCTTCCTTTGTCACTATTCTCTTCTAATGAAATTT CCTTATATCTAAAAAAACAAATAATTGGTTTCTTGTTTGTGCATTTGGTTTGTCATGACAAGGAAATGCCTGAATGTCTGCTATTTTTTCTATGAATGTC ACAGTTTTTTCTTCTATGTTTCAGTAATGCATAAATGTAAAAATCTATATGGTTTTAGATTATATCTTTACTTTTAAACTATTATCATATTTGTATTTTA AAATAAAATACAGCTTTATTGATTTACTTAATCTGGTTCCTTCATTCTTATCCTTAACATTTCTTGAATTTATTGCTGGTGCCTGGTATTATTGACATAG ATTTTGTCACAAGAAAAGTAAGTTTTGGTAAACTAAGGGAATTACAATGATTAGAGTTTTCTCCTCCTCTTAAAAAAAGAACTGTTTTATTAGACTGGAG GGAATCTGTTTTCATTTCACTTGCTTTTTGATGTATGTAGTGGCTAACTTTAGTATGAGCTATCTCATTATCGTCCTCAAATTGGATATAAATTAAAGGA TATTTCGGTATGAATAGATTAGGCTGAGTTACACAACCAAAATCCCTAAGATATTATATGCTATTGATCATATTGGTCAGAATGACGAGAAGATGAAACG AATGGTTGCAGTGCTGATTTGGTTTGTAACTATTCGTGTTTAGATTTTCTTAAATACAAATGTCAGTATGCTGCATACTGAAATTTGCTTATTCGAGTTG ATTTTCACCAACTTATAGTGTTGATATTTGATAAAGAGCATCTATTGAGCTGAGTAGATTTAATACTTATGTTGCCAATTATGTTTCTTCGAATTAGATA ATTAGATTGGTTGGACATGCCATTTATTTTGGGAACTGAGAAGTAAGATAACCCATTAGTATGGAATTGCGGTAATAGTAGACGTACTATTATAATTTGT TATAGATCAAATGAAAAGTTTCACTTTCGATTTGTACCATTTACGAACTTTAAACTGTAAAGTTGTTCAGAAAATTGAAGTTGTCAGTTTAAAATATCAA CAAAGGTATATGTTCTACGGTGGGAGGCTAGGATGGAGGAGTTCTGAATATCATTATCCTTCAATATGATTTGGATTTTGGAAAGGGCAGGGCCTCACAT TTCCAATGGACTAGGACTCCTTTGAAGCCACATGTGTTCCCTGAAATTTTGATCAGATCTGGAATGGGTGTCGGTGGTCTGTGCTTAAGTAAGGGAAGGA TATCTTGGAGATGAGGCTGTGGTGGGGTGGGGAGCTTAAGGATGAGTTTTCACAAATTTGATGAAGGACAAGCGTCTTAGTATGTTTGGAGCATGGATCG TGGAGCTCTACAGCCTCCACCATGATTCTAGATTAGGAGTGCTTCTGGTTTTCTGTATTATAGATGGATTAGAAGTGCTTTCTCCTTTTCTCAAATGTGG CCATCTTCAAACATGATAAACTTACTAGTCTTTGTGATCCCTCGGACTTGTATTTCTGTCTCTCTTCATCCTGCTATAACATTTATTTTTGGACTACGGA AACTATCCTAATATATATAAATTTCTTTTATCATTTTAGGATTTTTGAGAAGTGGCACTTGACAGTGATTGGTTTGTCTGTCAAGTTGGAAATGTTTTTC AGAATTACCGCCTTACTAATTGTCAACCTTATAATGTTTGTGTTTGATATTCAGGGGGCACCACCTTGCACACATTATGCGCAACGTGGAGTATGTAAAT TTGGACCTGCATGCAGATTTGATCATCCTGTAGCACCACTGAGTTATAGTCCATCTGCTTCCTCCCTGGCTGACATGCCGGTTGCTCCCTATCCCGTGGG TTCATCAATTGGTACACTTGCTCCATCATCTTCATCATCGGAGTTGCAGCCTGACCTTACCCCAGGATCCAACAAGGAGGCTATTTCATCCAGGTTGTCT TTGCCAATGAGCACAACGACTGGGTCAGTCGGCTTGACTTTGTCAACCGGTGGATCTGTCTCTCAATCTAGCAGTCAACCATCTTCTTAGATTTCCAATC CTTTAGCTGCTCCCAGTACTACTACAAGTGGCAATGCCTTTCACATCTCAAGCTAAGCGATGTGAACGCAAACCACATCATTGCTCCTTTTTATCTCAAT TCTTCAACCGGACATCATTATTCAAGGAGGTCCTCAAATAGGTTTTATTTTTCAATTATCCATGTTCCATATTCAGGTGTAGTACACGTCCCACGAATTA TCCGTGTCCATAGAATCCTTTCTTGGCCATCCCTTTGATCTTGAATAAACCATGGCCAACCCATACAGCTACCTCGCTTTTGAATAACTCCAAAGGAATC TGCAACTCCATTATGCACATTCCATCCACTCTCCATTTTTTGGTGTTTGTTGTGCTTTATTTATGTTTCAATATTTTCTTATATTAGAAAATTCAGCCCA GATTTTCATTGACCTTACATATATGTTTCCTCAGCTGAACCTTTTTGAACCAGGAGACTGTCAATCTGTAATGAGGTTTCACATTGCTATCTTATATGGT TTTGGATACAGTGATGTTGTGACAATGAAAAGCTTGACTTGGTACTTCAATTTATTACAGAATATGTATATGAAGAAACACATTTAAATTAACACAAATG ATGTGTAATAACCCCTTTTTTCCTTCTCCATTTATATCTGTTTATTTGATCTGTTTTGATGTGAGATCAGGTAATTTTCTGGAGGGAATTTTTTATCTGT TTAACACTCCCâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_75193; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_120414
| Blastp | Zinc finger CCCH domain-containing protein 6 from Oryza sativa with 48.48% of identity |
|---|---|
| Blastx | Zinc finger CCCH domain-containing protein 6 from Oryza sativa with 51.76% of identity |
| Eggnog | zinc finger, CCCH(ENOG410Y25U) |
| Kegg | Link to kegg annotations (4326236) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019439709.1) |
| Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) (PF00642.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |