Id Trinity | FTRINITY_DN58220_c1_g2_i11 |
---|---|
Name Transcript | Ll_transcript_120415 |
Sequence | TATTCATTAATAATTGACATAGAAGTGAAAAAAAAGCTTTGAAAGTGTAATAAGAGAGTAGTAGCAGTATGAGTAGTAAGAGAGAGAGAGAAAACTTATT GATCACTCTGCTTCTCATCGGAATCTCTCATTCTGCGTTTGCCTTTTTTAGATTCTACTTTTCCGTTTTGGTCCGTACAATGGAACGGTACGGACGCTCC AGCGAAGGGTCACACTCTGATCCCTCTCCAGAATGGGGATACCAAGAGTCATCATGGCAAGGTAGTGGATTGTACCCTCAGCGACCCGGTGCGGCTGATT GTATCTACTTTCTCAAGAACGGATTTTGTGGCTATGCTTCTCGATGCCGCTTTAATCATCCTCGTGACCGCGCTCCAGTAGTTACTGGAGCTGCAAGGTC TGGATTCGGGGAGCATCCGGAACGAGTTGGTCAGCATGTGTGCCAGTATTATATGAGGACGGGATCATGCAAATTTGGTTCTTCCTGCAAGTACCACCAT CCCAGGCAGGGAGCAGGCATAGATGCCCCTGTGCCACTAAATTATTATGGATATCCGCTGCGTATGGTTTGTACCACTACATTTATTGCATAAATTCTTG CATGCTTTGTGAATGTCGGGATCACATTTTGTAGTCGTAACAAAAGCTTGCTCTGAACTTGGTTTA BLAST |
Tissue | flowers |
Gene name | LI_gene_75193; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_120415
Blastp | Zinc finger CCCH domain-containing protein 58 from Arabidopsis with 56.16% of identity |
---|---|
Blastx | Zinc finger CCCH domain-containing protein 58 from Arabidopsis with 56.16% of identity |
Eggnog | zinc finger(COG5063) |
Kegg | Link to kegg annotations (AT5G18550) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019437732.1) |
Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) (PF00642.23) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |