Ll_transcript_120417

• Id Trinity: FTRINITY_DN58220_c1_g2_i12
• Name Transcript: Ll_transcript_120417
• Sequence: TGAGAAGCAAACAATGTGAGAGACCAATAGAGAAGCACCTTTTTGTGAAGAGTAAAGGTGAAAGACAAAAAATGAATGAAACTAGAGAGAGAAAGAAAAA GACCCACCAAGCTTAGTAGTACAAGAAAAAAAAGTAGTAGCAACAGTTTTTGTGTTTGTGTGAGAAAACAAGAGAAGAAAAAACATCATTTTATCTCTCT ACTTTCTCTCTCTAAAATCTCCATTTGATCGAACCTTCTCATTGTTTCACCGCTTCAATGGAGAGCTTTGCGAGGTCCACTGAAGGCTCTCGCTCCGATC CGTCGCTGGAATGGACCGGACACGGTGGCGAAACCGGTTTACAAGGGTCTATGTGGCAATTGGGGTTAGGTGGTGGTGGCGGTGGCGAGGAATCGTATCC GCTACGCCCCGGTGAGGCTGATTGTATGTACTATTTGAGGACTGGTGTCTGTGGCTATGGTTTGCATTGTCGATTCAACCATCCTCCTGATCGTGGCGCG GTAAATTCATGTTTAGATTTTGCCATTGAAGAGGTTTTGTGATCATGTTGGTTCGATCTTGGTTATGTAGAGTGGATAATCAGTGTTGAGCTTGATCATT CAGAAGGATTTTCATTATTGGGTTGTATTGATTCAAGTCATTGATTGAATTGAACTTTATTTAATTAACTGAAATTATGATGATCGCATTTAACACTCCA ATTTAATGTTTTTCCTAATTTGAAGATATCTGTGTATACTGTATAGGTTATTGGAGCTGCAAAGACCGGGGAGTTTCCGGAACGAGTAGGCCAGCCTGTG TGCCAGTATTATATGAGGACAGGATCATGCAAATTTGGTCCATCCTGCAAGTATCACCATCCTAAGGAGGGAGGAGGCACTGCTAACCCTGTCTCGCTAA ATTATTATGGTTATCCATTGCGACCGGGTGAGAAAGAGTGCTCCTACTATGTGAAAACGGGACAATGCAAGTTTGGTTCAACTTGCAAATTCCATCATCC ACAGCCTGCTGGTGTCCAAATTGCACCACCACCACGGCCAGTTCCCCAAGTTTCACATTTATCTGTGCCCGTGCCTTCACCATTATATCAAACTGTACAG CCTCCATCTGATCCTTTATCACAACAGCTTAGTGTACTGGTTGCAAGGCCACCTCTGCTACCTGGATCATATGTCCAGAGCCCCTATGGCCCTGTGGTAC TGTCCCCTGCTATGGTCCCTTATTCAGGCTGGGCTCCTTATCAGGCTACTGCAACAAGCACCGTACTTCCTTCAAGTACTCCATCTAATGTTGGTTCAGC ACAGCTCTATGGGATAACCCAGCTACCTTCATTAGCAGGTGCTTATACTGGACCTTATCAACCTTCCGGTTCCGTAATTGGTCCTTCAAGCAGTAGTCAG AAGGAGCACTCACTTCCAGAAAGACCTGATCAACCAGAATGCCAGTATTACATGAGAACAGGGGAGTGCAAATTTGGTCCATCTTGCAGGTACAACCATC CACCAGACATGAGTGCACCAAAAGCTACTGTGACCCTTAGTCCTGCGGGTCTACCTTTGCGCCCGGGGGCACCACCTTGCACACATTATGCGCAACGTGG AGTATGTAAATTTGGACCTGCATGCAGATTTGATCATCCTGTAGCACCACTGAGTTATAGTCCATCTGCTTCCTCCCTGGCTGACATGCCGGTTGCTCCC TATCCCGTGGGTTCATCAATTGGTACACTTGCTCCATCATCTTCATCATCGGAGTTGCAGCCTGACCTTACCCCAGGATCCAACAAGGAGGCTATTTCAT CCAGGTTGTCTTTGCCAATGAGCACAACGACTGGGTCAGTCGGCTTGACTTTGTCAACCGGTGGATCTGTCTCTCAATCTAGCAGTCAACCATCTTCTTA GATTTCCAATCCTTTAGCTGCTCCCAGTACTACTACAAGTGGCAATGCCTTTCACATCTCAAGCTAAGCGATGTGAACGCAAACCACATCATTGCTCCTT TTTATCTCAATTCTTCAACCGGACATCATTATTCAAGGAGGTCCTCAAATAGGTTTTATTTTTCAATTATCCATGTTCCATATTCAGGTGTAGTACACGT CCCACGAATTATCCGTGTCCATAGAATCCTTTCTTGGCCATCCCTTTGATCTTGAATAAACCATGGCCAACCCATACAGCTACCTCGCTTTTGAATAACT CCAAAGGAATCTGCAACTCCATTATGCACATTCCATCCACTCTCCATTTTTTGGTGTTTGTTGTGCTTTATTTATGTTTCAATATTTTCTTATATTAGAA AATTCAGCCCAGATTTTCATTGACCTTACATATATGTTTCCTCAGCTGAACCTTTTTGAACCAGGAGACTGTCAATCTGTAATGAGGTTTCACATTGCTA TCTTATATGGTTTTGGATACAGTGATGTTGTGACAATGAAAAGCTTGACTTGGTACTTCAATTTATTACAGAATATGTATATGAAGAAACACATTTAAAT TAACACAAATGATGTGTAATAACCCCTTTTTTCCTTCTCCATTTATATCTGTTTATTTGATCTGTTTTGATGTGAGATCAGGTAATTTTCTGGAGGGAAT TTTTTATCTGTTTAACACTCCC
• Tissue: flowers
• Gene name: LI_gene_75193;
• Additional information: details;

Expression of Ll_transcript_120417

FPKM

• FPAB: 0.6
• FPNAB: 0.1
• LF1: 0.5
• LF2: 0.2
• LF3: 0
• LF4: 0.2
• UF1: 0
• UF2: 0
• UF3: 0.4
• UF4: 0.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_120417

• Blastp: Zinc finger CCCH domain-containing protein 58 from Arabidopsis with 58.45% of identity
• Blastx: Zinc finger CCCH domain-containing protein 58 from Arabidopsis with 58.73% of identity
• Eggnog: zinc finger(COG5063)
• Kegg: Link to kegg annotations (AT5G18550)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419041.1)
• Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) (PF00642.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;