| Id Trinity | FTRINITY_DN58234_c3_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_119253 |
| Sequence | CTCAAGATCAGTGAGTTCCAATAGGAATCCTGGGTTTAGTAAGTCAGTGACGGTGGAATCCAAACCATGGGAAGAGAAAAGAACTGCCCAGGTTGTCGTA GGCAGTGGAACAAGTAGTGTGGGCAGTGTGCAGACTTCTGACACCAATAAATCCTGAGGAGGGAGATTTAAGCATCTAAGTGCAGCGAAAATGAGAGAGA AAAGGGAGAAAGGGGTTTGTTTTAGATGTGATGAGCCCTATAGTCGTGAGCACCGATGTAAGAATGGTCAATTCAGAATGATAGTGATGGAGGAAGAAGA TACAAGAGAAGGGTTGAATGAAGATGAATTGGAAGAATTAAATTTGAATTCTCTCCAATTATCTTTGTGTACTATGGCTGGATTCACAACAAAAAAATCA TGGAAAGTAGCAGAAGAAATGGAAGGCAAGGATGTGGTAATCTTGATAGATTGTGGGGCTTCCCACAATTTTATTTCTTCTGAACTAGTGGGAAGATGGC AGCTTAAAGTACAAGATACTTCTGCCTATACGGTGGAGGTTGGAGATGGGCATAAAATTCAATGTAAAGGGAAATGTGCTGAAATGAAGGTGTTGATGCA AGGGCTCGAAATAGTTCAAATTTTTTACTTATTTGGGCTCAAGGGTGTAGACCTGGTTTTAGGGCTGGAATGGTTAGCAAAATTGGGGGAGGTTAAGGCT GACTTTGGTAAGTTGGAATTAACCGTGAAGAAGGGAAATATGGTGCATAAGATCAAGGGATATCCTTCTCTCCATAGAACACAATTATCATTGAAGGCAT TTATGCAAGTATTAAAGGAAGAAGGGGAAGGATTTATGTTGCAGGGTGTGGAAGGTACAGAATTGGAGAAGATAGTAGAGATTCCCAAGGCTATTTCAGA AGTGATGAATCAGTTTGCAGAAGTTTTTGAGAGTATTCAAGGTCTTCCACCTCAAAGAACTCATGATCATGCAATCCATCTCAAGGAAGGGGCTGAAATT CCCAACATAAGGCCTTACAAATATCCTCACTATCAAAAGAATGAGATTGAAAAGTTAGTGCTGGAAATGTTGCAAGGAGGGGTCATTCGGCCTAGTGTAA GTCCTTACTCTAGTCCTGTAATTTTGGTTAAGAAGAAAGATGGTGGGTGGAAATTTTGTGTTGATTATAGGGCCCTCAACAAGATCACTATTCCTAATAA ATTTCCAATCCCTATTATAGAAGAGTTATTGGATGAATTGGGAGGGGCCAAAATCTTTTCCAAGTTAGATCTTAAATCTGGTTATCATCAAATAAGGATG AAAGAGCAAGACATTGAGAAAACTGCTTTTAGGACACACGAAGGGCATTATGAATTTGTGGTGATGCCCTTTGGATTGACAAATGCACTCTCTACTTTTC AAGCTTTGATGAATGAGGTCTTAAGCCTTTCTTGAGGAAATTTGCATTAGTGTTTTTTGACGATATATTGGTATTTAGCCCTACTTTGGAGGATCATTGT GAACACCTCAAGCAAGTTTTACAGGTGCTGCAATTGAATGCTCTTAAGGCTAATCCGAAGAAGTGCACTTTCGGTCAAAACATATTGGAGCACTTGGGAC ATATTGTGTCATCAGATGGAGTTGAAGCTGATCCGGCAAAGGTTGCAGCCATGTGTTCTTGGTCTGTTCCCAAGGATATCAGAGGGTTGAAAGGCTTTCT AGGCCTCACGGGTTATTATCGGAAGTTTGTGAGGGATTATGGGAAGAAGGTAAAACCCCTCACGTATTTATTGAGGAAGGAATGGTTCAAATGGACAGAT CAAGCTACTCAATCATTTGAGATTCTCAAGGCTGCTATGATTGATCTTCCTAAACTGGCTGTACCAGATTTCTCCAAAGTCTTTGTCATTGAGACGGATG CCTCTAGTAAAGGATTAGGAGCTGTTCTTATGCAAGAAGGAAAGCCCCTAGCGTATTGGAGTCAAGGATTATCTATGAAAGCGCAACAAAAATCAGTCTA CGAGAGGGAATTGATGGCTTTAATACAAGCGGTGCAGCGATGGAAACACTATTTATTGGGAAGGCATTTCATAGTCAAAATTGATCAAAGAAGTCTTAAG TTTCTAAATGATCAGAGGCTATTTTCAGAGGAACAATTTAAGTGGGCCGTGAAGCTCATTGGGATGGATTTTGAAGTACAGTTCAAACCAGGAAAGCTAA ATTGTGTGGCAGATGCTTTGTCCAGAAAATGGATGTATGCTATATCTTTGATAGACAAGGCTGATATAGAAGGATGGACACAAGAAGTGAAGCAAGATCT GCAGTGGCAGAAAATGATACAAGACCTCATCATTAAACCTGATTCACATTCCGAGTTTGCTTATAAGAATGGGATATTGTTGCATGAAGGTCGATTGGTT TTAGCAAGGGATTGTAACCGAATTCCTCTCATCTTGAGAGAATGTCATGAGTCTCCTATTGGAGGACATTCAGGGTATTTCAGAACCTACAAAATAGTGG CAAGTTGTGTCTATTGGATTGGGATGAAGGGTGACATTAAACGGTTTGTGGAGGAATGTGAGGTATGTCAAAGGTACAAGCATTCTACTCTCACACCAGG GGGACTATTGCAACCACTACCTATACTTACTCAAGTTTGGATGGAAATCTCTATGGATTTTATTGGTGGACTACCAAAGAGTAGAGGTAAGGACAATATA TTAGTGGTAGTGGACAGATTGTCCAAATATGCCCACTTTTATGCACTCCGCCATCCCTTCTCTGCCAAAGATGTGGCTCAATTGTTTGTCAATGAGGTAG TGAAATTGCATGGGTTCCCGACAGCTATTGTTTCCGACCGAGATCCCATTTTCCTAAGTAATTTTTGGAAAGAATTATTTAGAGTGGCAGGAACACAATT GAAATTAAGTACTTCCTACCACCCTCAAACGGATGGGTAGACGGAAGTAATGAATAGGTGTCTTGAGGGTTATTTAAGGTGTTTTGTAGGGCCCAAACCG AAACAGTGGGGACAATGGTTAGCTTGGGCATAGTTCTAGTATAACACTAACTTCCATAGTGCTATTGGAATGACTCCTTTCAAAGCGTTGTATGGTCGGG ATCCCCCTCTACTTTTGAAAGCAACCGAATTTCCTTCTAAGGTGGATGAGGTCAATAAGTTGTTGCAAAACAGAGATACTGTTTTGGAAGAACTTAAACA GAACTTAACTAAGGCTCAAGAACAAATGAAGAGACAAGCAGATAAAAATCGGAGACATGTGGAATTCCAATTAGGGGATTGGGTGTTCTTGAAGATTCAA CCATACAAACTAAGATCTTTGGCTTCTAGACCTTGTGCTAAATTGGCAGCAAGGTACTATGGACCGTATAAGATCATCAGCAAGGTAGGACCAGTAGCAT ACAAGCTTAAATTGTCGGAACATGCTAAGATCCACCCTGTTTTTCATGTCTCTCTATTAAAGAAGGCCATTAAACCGAGTCAGCAACCTCAACCTCTTCC AGCATTGTTGAATGAAGAGTATGAGTTACAAGTGGCGCCAGAAGATGTTCTGGAGACTAGGGAGAATCAACAAGGAGTAGTGGAGGTGTTGGTGAAATGG GCTCAATTACCGGAAGCGGATAATACTTGGGAGACGGCATCCAGCATACAAGACAAATTTC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_75324; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_119253
| Blastp | Transposon Ty3-I Gag-Pol polyprotein from Saccharomyces with 51.97% of identity |
|---|---|
| Blastx | Transposon Ty3-I Gag-Pol polyprotein from Saccharomyces with 29.8% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (YIL082W-A) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_015964281.2) |
| Pfam | gag-polyprotein putative aspartyl protease (PF13975.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |