| Id Trinity | FTRINITY_DN58240_c0_g2_i6 |
|---|---|
| Name Transcript | Ll_transcript_119767 |
| Sequence | CTGAACCTGATCTATTTCTGCATTGCTTTGCTGTACTGTGTTGTGTTGCACTGTAGTGTTGGGTTAGCCACAGAAATGGGTAATGGCAGTGATGGCACTG ACGTGAGTAGCTGCAAATGCCAGCTGGATACACCTTTAAACGTGTCCCCCTTCCCAACACTTACACCTGTCCCCTCTTCCTTTGCCCTTTTTGCATTTAT TTACTCTCTCTTCACATTCTCTTCTGCAATATTTTTCTAGAAACTTTTCCTCTATTTTCTTAAATTATATCCACATACCCCTATCTCTTAAGGACTAAAA TATATAATTTTTATGTTCTCCATCTATACTTACTTCCACCCCATCCCATCTCAGATCCAAAACCCAATTTCCCATGTATGTAAATTCCTTTCTTTGGTAC TATTTTGTTTTAAAATTCACAAATAGAAAGCAAAGAAGCCCTTGATTTCATGAAGTGGGTGTTATATATATGAGTCTGCACTTAAAATAGTTAATAGTAT AGTAATACACAATGATGTAAAAATTTATATGCTATAAGTATAAATGATACATTATGCAATAACAATGTACAAAAACAAAAGAACATGGGGTGTCCTTGCT CGTTATTAAGGAATAGGACAAGGGTATATTGGGCAACGGGAAAAGCAGTGAATAAAGACAAAACAGGACAACATTAACAACAACTATACATCATGAAAAA AGAGGGAAGAAAGAAGAAACGAGGAAACAGTGGTAGCAAATGATGATGTTGATGATGCAGATCTTGTTCTAACTCTCAACTCCTTTCTCAAAATCTAATT AACTCCTTTCATATCTTCATCTCATTCAACACTTCCAACTCTGAAAAAAGATTACACTTTTCTTCTCCATTGCTCAGTTTAAAGTGTAAACTGCAACAAA GAAACTTAGATTAGAAGAAACCAATTTAGTTCTTATTTGGGGTGTTTCCATTTTCAAAAGGGTCTTCGCAATTTTGTTCAAGTTGTAAAATTTAGCTCAA AAAATAGAGGCTGAAATTCGAAGGAAATATGGAGACTTGGTTATCGGTGGATGCAGTGGTAGAAGAGATAATGAGGATTCATAAATCATTACCTGCTAGA CCAGGGATTGATGAAGTTGAAGCTGCAAAAGCTTTGATAATCAATGTTGAGAGAGAAGACCAAGTGAGATTTGAATTCATAGCCAAACAAAATAAGGGTG TTGAAGTGCCAGAAGAGTTGTTCATGCTGCTGCAAGAGATGCAGAAGAATCTGGTTTATTTTCAGAGCAATGAGCAAAAGAGGGAGGCTGTGAAACTTCT TGATCTTGAAAATGTTCACTCACTATTTGATGAATTGATTCAGAGAGCTTCCAACTGTGTTTCTTCATCTCCCTCCATTTCCAATTTGAATTCCAGAAAA ACCAGTTATCCTGATGGTTCCACTTCAACTGTTTCTACGAGTTTGTCGAAGAATTCTGTTCCTGCTTCAGCTTCTCGAGGTGGTTTTGATAAGCTTCCAC CTCCTGCTACTGCTGCTTCTTCCAGTTTGTTCAATGCAGAGAAAGAACCTGTGAAAAGTTTAGATTTGTTCACAAGAGATGACAGTTATGTTAAGACCAA GTCCACATTCTACTCCAACAGTTATGGAATTCAACCCAATATCCCATCAAAACCACAGATATTGGATTCATCACTAAAATCCACAACTACTGCAGGTCAA GTTGGTGATAAACTGAGTTTGATAAAACTTGCTAGCTTAATTGAAGTTTCTGCAAAGAAAGGGACTCGGGATCTCAAACTCCAGAACAAGTTGATGGACC AAGTTGATTGGTTGCCTGATTCGATAGGAAAGTTATCAAGTTTGGTTACCCTTGATTTATCCGAGAATCGGATTATGGCCCTACCTTCCACAATCGGAGG CCTTTCATCCTTGACCAGATTGGATTTGCATTCCAATAGGATCACAGAGCTCCCTGATTCTATTGGAAATCTGCTAAGTGTAGTCTATGTAGATCTGCGG GGAAACCAGTTATCATCTCTGCCTGCTTCTTTTGGCAAATTAGTACGTCTTGAAGAGCTTGATTTGAGTTCGAATCAGCTTTCAGTACTTCCTGACACTA TAGGATCACTTGTTAGCCTAAAAATATTGAATGTGGAGACAAATGATATTGAAGAGATTCCACATTCTATTGGTAATTGTTCTTCCCTTAGAGAGCTTCG TGCTGACTATAATCGGCTTAAGGCCCTACCAGAAGGTGTTGGTAAGATTCATAGCCTAGAGATTTTGTCCACGCGATACAATAACATTAAACAACTGCCG ACGACAATGTCATCTCTAATAAACCTGAAGGAACTTGATGTGAGTTTCAATGAGCTTGAATCAGTGCCCGAGAGCTTATGTTTTGTTACATCTCTTGTCA AGTTGGTCATAGGAAACAATTTCGCTGACATGCGATCATTACCAAGATCCATTGGGAACCTCGAAATGCTCGAGGAATTGGACATCAGCAATAATCAGAT ACATGTTCTTCCTGACTCATTTGGGATGCTGACTCGACTACGTGTCCTACGAGTTCAAGAGAATCCTCTTGAAGTTCCACCAAGACATATAGCTGAAAAG GGAGCACAGGCTGTTGTCCAATACATGGCTGAACTGGTAAAGGAGGAGAAGAAGGATGTTAAACATCGGCCACTAAAGAAGAAGAAGAGTTGGGCTCGGT TCTGCTTCTTTTCAAAACTCTATCAAAAGAAAGGGTGTTGGAGTTGTTGATCATGTCAAAACCTGATTTCAATTAGTTAAGCCATGTTGGCAAGCACTAG ATTCCACAAGTAAGTTGAGTTCTTTTCAGGTCAATATCTAAACTATAAAATTGGAGTTGAGCATTAATTATGAATAGTAGGCTTAATCATTGCTCAAATG TTAGTGTGTCACTCTAATGGAGAAAATCACAAGCAGGCACGGTATAGTAGTATACTACACTATCTCTTAGGCACTCAAATCATTATTTGATAAAGATAAA ATTATTTTCAAAGATTATTGCATTCTTATCATGGAGTATACAACCTGATATATGTGAAATAATGAATTAAATGTTTGTGATAGACTTCTCTAACTTAAAT TTAATCTTCTAATTGGCATAAGCTCACTACTTTGATATGTCTGTATTTTTTCAGAGGGATATATCAATTAGCAAAGAGCCAAAAGTGAAGGAATGTCTGT ATTTGATGGCTGTTAGAATTTGCTTTGACTTGGCTGCACAAATTGTAGATTTCTTGTTATATTATTTTTCTGATATCTTTCTTTTGTTTCTATACAATTT TGTTTTTCAATTTTAATTCATTTGTAGTTATGTTGTAAAGTAGAAAGAAGTGTACCGGATATGATTATGTACCCTGTGCCTGTATTTATGTTCAATTGTT CACCTTCATTCTATTGTTAATCAAATTACAGTGTTACCCTTTGT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_75390; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_119767
| Blastp | Plant intracellular Ras-group-related LRR protein 4 from Arabidopsis with 65.49% of identity |
|---|---|
| Blastx | Plant intracellular Ras-group-related LRR protein 4 from Arabidopsis with 65.49% of identity |
| Eggnog | leucine Rich Repeat(COG4886) |
| Kegg | Link to kegg annotations (AT4G35470) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421957.1) |
| Pfam | Leucine rich repeat (PF13855.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |