| Id Trinity | FTRINITY_DN58249_c2_g4_i2 |
|---|---|
| Name Transcript | Ll_transcript_118855 |
| Sequence | AAATAAAAAGAAAAATTAAGAAACTAGATATTACTATCCGCAGTTTGGTACATCTTAGAAGAATAAAAGGCAGAATTTGCATTGCGTTGGAATTCTGCGA CAAAGCTAACAGCGAAACTTCGATTCAACTCAAATCTCATGTACGAAACCCTAGAATTTCTCCATTTCTTTCATTCTTCGATTTTCTGAAAAAGCCTTTG CTTATTCTCGTTCTTTCTGTTTAGACGCAGATTAATCATGGCCACGACGGAGCTGATTTTAAAACCGTCGTGCGGTGGTTGTGGTTCAACGGCCGATCTC TACGGAAGTAACTGCAAGCACATGACTCTGTGTTTAACATGCGGCAAAACCATGGCGGAAAACCGCGCCAAATGCGTTGTTTGTGACGCTACTATCACTC GCTTGATTCGAGAATATAATGTTCGTGCAAGTACTAGCAATGACAAGAACTATTTTATTGGAAGGTTCATCAGTGGCTTACCTGATTTTTCAAAGAAGAA GAGTGCTGAAAACAAGTGGTCTCTGCAGAAGGATGGACTGCATGGGCGACAAATTACCGAGTCTTTGCGGGAGAAGTACAAGAATAAGCCTTGGCTCTTG GAGGATGAAACAGGTCAATCCCAGTACCAGGGTCATCTAGAAGGTTCACAATCAGCTACATATTACCTTCTAATGATGGAAAAAAAGGAGTTTTTTGCCA TTCCTGCTGGTTCTTGGTATAATTTCAACAAGGTTGCACAATATAAGCAATTGACTCTGGAAGAAGCAGAGGAGAAGATGAAGAACAGAAAGAAAACTGC AGATGGATATCAAAGATGGATGATGAAAGCAGCAAATAACGGGCCTGCTGCTTTCGGCGAACATGTGAGGTTGGAGGACAAGGAAACCAACACTGGTGGA GGCAGAAGCCGTAAAAAAACCGGTGAGGATGATGAAGGCCATGTCTCTGATAAAGGGGAGGAGGATGAAGACGAGGAAGCAGGAAGGAAGAATAGGCTTG GACTTAATAAAAGAGATGGTGATGATGATGAAGAAGGTCTAAGGGGAGGCGACCTTGATCTAGATGATGATGATATTGAGAAGGGCGATGACTGGGAGCA TGAAGAGATTTTCACTGATGATGATGAAGCTGTTGGAAATGATCCTGAGGAAAGGGAAGATTTGGCTCCTGAAATTCCTGCTCCTCCTGAAATCAAACAG GATGAGGAGGAGGAGGATGAAAACAATGAAGAGGGGGGAGGTCTGAGTAAATCTGGGAAAGAGCTGAAGAAACTTCTTGGGCGATCTGGTGGTCTAAATG AATCTGATGCAGAGGATGATGAAGATGATGGCGATGATGGCGATGACGATGATGTATGGGTTATGTTCCTTCTATATTTTCACTCATCCTTTAATTTTTT TATAGAAGTGCTATAAATGTTTGCTGTTCATTGCACTCCATAAAAAGATGAAAGATAAGCACAGCTTAGTGCAAACTGCAACCCCTTTGTGGTGAGGAAC TGATAGCTTTTGCATTTTCTGATTTATGAGGAATGGCTGATTGGTTTAATTTCATAGATACTATGAAACCTTGCACATCGTTGAACTTAGAGTTCAGCAT TCTTCATCCATTAGTGCTGGTTGATCATTTATTCTTTTTGTCCAGGTGGACGATGAGGTTGGTGTTCTTCCTGTGATTGCTACAAAAAATAAGAAGGAGC CTAAGGAAGAACCTGTTGACAACAACCCTTCAAAACCCCCAGCAACAGGTCCTTCTCGCGGAACACCTAATTCAAAGTCTTCAAAGGGGAAGAGAAAATT GAACGAGGAAGCAAAACCATCTAATAGTGCTCTACCGAAGAAGGTGAAGACAGAAAATGAATCAAAAGCATCTGTCAAAGATGTAAATGGGTCTGCATCT AAAAGTAATGCACCTCCAAAAGGCACACCTTCAGCACCTCCACCATCAAAAGCTGGTTCTTCCACCACAGCTTCTGGGCCTGTGAGCGAGGAAGAAATTA GGGCTGTTTTAAGGCAAAAGACTCCAGTGACCACACAGGATCTTGTAGCTAAATTTAAGGCTAGACTCAGATCTTCAGAGGATAAGAAAGCGTTTGCAGA GATACTGAAGAGAATCTCTAAGATACAGAAAACTACTAATGGATCCGGTTATGTCATCCTGAGAGATAGTAGGTGAGAATGTATTATTTCAGTGTGCGAC TCCTGTTTTTTAAACTCCTTCAAAAACTTGACTTCATACTTCACAAATGGTTTACAACTTCCAAATGGGAGTGAAGATGGAGATTATATGTTCCAGCTTT TACAAGTTCAAATGTGTAATAATAGTACTTATACATACTATCATTACAGATGTTTTTCCTCTCATTACTTGTTACCTTATTACAAATTATTATAGATGAC ACTCATAGATCTTATTATAATTTATCTGCATTTCAAAATGCTTTGTGACTCGTTTGAGATAACTTATGAGCTTCAGAAAAACTGTTTAAACAATGTACTT CATTGATAGGGGGAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_75469; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_118855
| Blastp | Transcription initiation factor IIF subunit alpha from Arabidopsis with 73.37% of identity |
|---|---|
| Blastx | Transcription initiation factor IIF subunit alpha from Arabidopsis with 73.21% of identity |
| Eggnog | General transcription factor IIF, polypeptide 1(ENOG410XSRW) |
| Kegg | Link to kegg annotations (AT4G12610) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425985.1) |
| Pfam | Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) (PF05793.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |