Id Trinity | FTRINITY_DN58254_c1_g1_i3 |
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Name Transcript | Ll_transcript_119599 |
Sequence | CTTGTCTCTTTCTCTCTGTGAAGTGTGAACCTTGTTTTCTTCAAATTTCAAAACCCAGAATTCACTTTCTACAATTCCATTATACGTCGTCGTTTTTGCC TTCACCCTTAGAATCTAGGGTTTCATCGAAGAAGAAGAAAATGACTACTATGGAGAGTTTGATTGGTTTGGTGAATCGAATTCAGAGAGCTTGTACTGTG CTTGGTGATTATGGAGGTGCTGATAACAACACTTTCTCTTCTCTTTGGGAAGCTCTTCCTTCTGTTGCTGTTGTTGGTGGACAGAGTTCGGGAAAGTCTT CAGTTTTGGAGAGCATTGTTGGTCGTGATTTTCTGCCTAGAGGATCAGGAATTGTTACAAGGCGTCCATTGGTGTTGCAGCTTCATAAGATTGAAAGTGG AGCAGAAGAGTATGCCGAGTTTCTTCACCTGCCAAGAAGAAAGTTCACTGATTTTTCTTTGGTCCGTGCAGAAATTCAAGATGAGACTGATAGAATAACG GGGAAGACAAAACAAATATCTCCTATTCCAATTCATCTTAGCATCTATTCTCCAAATGTTGTCAACCTAACCTTGATTGATTTGCCGGGTTTGACCAAAG TTGCTGTAGAGGGACAGCCTGAGAATATTGTTGAAGAAATTGAAACGATGGTTCGATCTTTTGTTGAGAAGCCTAATTGCATCATACTAGCAATATCTCC AGCCAATCAAGACATAGCAACTTCTGATGCTATTAAAATTTCCAGGGAAGTGGATCCCGAAGGTGAAAGGACATTTGGGGTGTTGACAAAGCTGGATTTG ATGGACAAAGGAACTAATGCATTGGAGGTCCTTGAAGGAAGATCTTATCGTCTGCAACATCCTTGGGTTGGTATAGTAAATCGTTCTCAAGCAGATATCA ATAAAAATGTTGATATGATTGTGGCTAGACACAAGGAGCGCGAGTACTTTGCAAGCAGTCCTGATTATGGGCACTTGGCTCATAAAATGGGTTCAGAATA CCTTGCAAAACTTCTCTCACAGCACTTGGAGTCAGTAATTCGGGCACGTATACCTAGCATTACATCTTTAATAAACAAAAGCGTTGAGGAACTTGAATCG GAGATGGAGCATCTCGGGAGACCTATTGCCCTTGATGCTGGGGCTCAACTCTATACCATCCTAGAACTTTGTCGAGCATTTGAGCGGATATTCAAGGAGC ATTTAGATGGAGGGCGGCCAGGGGGAGATAGGATATATAATGTTTTTGACAATCAGCTTCCTGCTGCTTTACGAAAGCTTCCATTTGAACGTCATCTTTC TCTCCAGAATGTAAAGAAAGTGGTGTCAGAGGCTGATGGTTATCAGCCTCACTTAATTGCCCCTGAGCAAGGTTACCGGCGCCTGATTGAGGGGTCTCTC AATTACTTTAGAGGCCCAGCTGAAGCTTCAGTAGATGCTGTTCACTTTGTATTGAAAGAACTTGTGAGGAAATCTATCGCTGAAACTCAGGAACTGAAGC GATTCCCAACTTTTCAAGCGTTACTAGCCACAGCTTCAAATGAGGCTTTGGAAAGGTTTCGTGAAGAGGGTAAGACGACAACTCTGCGGCTTGTAGATAT GGAATCTTCTTATCTCACTGTGGATTTCTTCCGGAGACTTCCTCAAGAAGTGGAGAAAACTGCAAATCCTGCTCCCTCGAATGTTGATCGATATGCAGAG GGTCATTTCAGGAGAATTGGATCAAATGTATTGTCCTATGTAGGGTTGGTGTCGGACACTCTTCGAAACACCATTCCAAAGGCTGTGGTTTATTGTCAGG TCAGACAAGCAAAACAATATTTGCTAAGCCATTTCTACACAGAAATAGGGAAGAAAGAGGTATACACCATATACTCTCTCTTACGTTTATAAAAAAAACT CTTTTGTTCCTTCGATCTCTGTCTATCTATTTTCTGAGAAAATGTATTATTCAAGAATTGGTAACAAACCTAACCTCACAAGCAAAACAGTCTTTGCTAA TTTCTACACACAAATAATGAAGGAAAGGATGCATACTGTCCCACTCAGTTTATTTTCAAAAGAAAAAGAAGCTCTTGCAGGATTGGTAATTTATTGACTC GGTTTTGTTGGACTTTGGGTATCATTTTGAAGGAGAAACTAATGAAGATGATATTTCTTATATAATGGTAGTACAACATAATATTTCTCTTCTAGGATTG TGTTCACAAGGGTCCTTTCTATTTAACCTTTTTTGGTTATGGCATTAATGAGCAGTAACATAAGCCCATGCTTATTATGAAATATGGAAGTTTGCCCAAG GGGTTACTTTTTTTGTTTTGGTACCAAAAATGGAAGAGGAGGGTTACTTTGCTTATGTAATCATTTGATGTGGATCCTAACAATATATATAACCAATAGC TTTGTTTACCTAATTGCATAATCACAAATATGTTGGATCATCTGCAAAATGCTAAGTTGTGTATCTGTATGCCATGATAAACTGATTCTCCTGCAGTTTC AATATATCATTGTTGATAAGGTTTAATCTTCTGTTATTTGCTCGTATAGGGTAAGCAGTTATTGCAAATGTTAGACGAAGACCCTGCGTTGATGGAGAGG AGACAACAGTGTGCGAAAAGGCTTGAACTATATAAAGCAGCAAGGGATGAAATTGATTCTGTTTCTTGGGTCCGATAATGCGCTTCGCTTCGTTGCTATC TGAATCTCTTCCTCGGACTTGTTCTTCACTGTAACCGGTAATAACTATTCGATTATGGGTTGGCTGCACCCAGATGTAATTTACATAGTTATGGTTGCAT TTGTTGAGGCATTCTATACCTTTCTTGATTGTAGATGTGATGTACATACATGATACATGCAGAGTATGATATTAGCTATGATATGTAAAATTAACTTGTA GTGTTGGTTCTGTATTCTCTTATTTTTGGGTGTTATATTTTTAATGCATCTATTTTGTGTTCCATTATTTTGATCCGAAATTATGAATTATACCATATTA GAAGACTGGTCTTAGAAAAGTGCTAAGGTTGAAGACTTCTTTAC BLAST |
Tissue | flowers |
Gene name | LI_gene_75501; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_119599
Blastp | Dynamin-related protein 1E from Arabidopsis with 80.17% of identity |
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Blastx | Dynamin-related protein 1E from Arabidopsis with 80.03% of identity |
Eggnog | Dynamin family(COG0699) |
Kegg | Link to kegg annotations (AT3G60190) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019450038.1) |
Pfam | Dynamin family (PF00350.22) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |