| Id Trinity | FTRINITY_DN58261_c0_g3_i1 |
|---|---|
| Name Transcript | Ll_transcript_118222 |
| Sequence | TTTGGTTCAAAGTTTGCATCCAACAGAATGTTGTTGGACTTGACATTTCTATGAAGCAAGTGTGGGACATAATCCCTGTGTAGATAAGCTAGTCCTTGAG CAACTCCAATAGCAATCTTCAATATAACTCCCCATGGCAATGGAAAACTCTGTCTTGAAATCAAATCCCCTAAGCTTCCTTCATTCAAGTACTCATAGAT GAGAAAAACTGACTCATCAGAATGACAGAACCCCAGAATTTTAACAACATTTTTATGCCTAATCCTTGCCAAAGTTTTTACCTCAGCTTTCAAACTCTTC GAAGACTGGTTTCCGAAATTAACTAGCTTCTTTACTGCTACTAATTCACCACTAGGCAAACTCACAACATAAGCTTTACCAAAAATTCCTCCTTTCCCTA ATGAGCTTTTCTCATTCATCCCGATAAGTAATTCATTCTCAGTAATTCTAAGAGGATAGAAGAACACCGAGCGCCAAACACCTACTTCATTATCGTTCCC CTTGCAAGATCTTCTATACAAAACAAATCCACCAACAACAAAGCCAGTTCCAACAACAAAGGCTAAAGAGATCAATGTACATGTTAAGATTGTAAGACCA CTATTATGATGCCTTGGCATATCATCATCAGAACATGAGTTTGGTAATCCAGGTCCACAAAGATCAGGGTTACCCTCCAAAAATGAGGCAGGTAGACCTG AAATTAAGGAGTATGGTACTTTACCAGAAAGTTGATTGAAGGAAACATTGAAAAGTGCAAGTTTCAAGTTTTGAAGCCCTTGTGGTATTGAACCAGTAAG ATTGTTATCTGAAAGGTCAAGATAAGTCAACACTGGTAACTCAGAAAGTGAAGTTGGTATTTCTCCAGTTACATGATTATCAGCCAAAGACAATGACACA AGTTTCCTGCATTTTTTCAGCTGAGGGATTTGACCAGAAAGTGAATTGTGGGAGAGGTTTACTATGCTCATAACTGGTGAGTCACAAAAATTTGGAGGAA GTTCACCATATAAATGATTTAAAGAAGCTGAGAATCTGTATAAGCTCTTCACAAAGCCAAGTCCATGAGGGATTTTACCAGAAAAGCTGTTATTGTCAAA CTGAACTTGCTCCAAAAAAACAGCTTTTGAAATTGACTCAGGTATTTGACCAGAGAATCTATTGTTTTCAGCTCTAATGAGCTTGATTTTAGGTAATGAA AAAATCTCAATAGGGAAATCTCCAGAGAAACCATTGTTCTGAACTTGGAATCTCTCAAGACTCTCACATTCACTAATAGAACTGTTTGATATTGAACCTG TGAAGGTATTTGTGTGGAGGCTGAGATTTATAACAAGGCCTTTACAAATACCATTTGGAAAGGGCCCTGAAAGCTTGTTCTGTGAAACATCAAAGGAAAC CAGATTCTTCAAAGAAGCTAGAGACTTTGGAACCAAACCTGTTAGATTATTCTCAGATAGATCCAAATGTGTCAAACTATGAAGGCCAACCAAAGAACCT GGAATCTCACCTTGAAAAGAAGAACTTTGAAGCAAAAGTTGCTTTAAACTTCCAAGTTCACCAATATCCTCAGGTATCTCACTCACCAAGTATTGATTTT GAGAAAAATCAAGCACTTCAAGCTTAGTTAAGTTTCCAAAAATAGCAGGCACATTACCTGAAAGCAAGTTACTTCCAATTTTAAGTACTTGAAGATTCTT CAATGAACCCAAGCTTTCAGGGATATTTCCTTCTATATGATTTCTACTCAAGTCAAGTACTTTCAGTGAACCAAACTGAGAAATCTGAGATGGGATAGTA CCCCATATAAGATTGCTACTTAGATTCAAAGTTTCCAAGAAAGTACACTGTGAAAGGTGAAGTGGAATAGGCTGGTTGAATATATTATCAGCAAGGTTGA GATAAGAGAGTTTTGGTAAGTCACATATAGAAGAAGATATATCACCAGAAAGATTTAAGCTTTGAAGGTTAATAGAAGTTACTGAGAATGGTGTTGTAGT TGAGCATGAGATTCCAGTCCAGTTACAAAAGTGGTTTGATGAAGTATTGGACCATGTTCTGCGAATTGATAGAATATTCAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_75562; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_118222
| Blastp | Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 from Arabidopsis with 65.6% of identity |
|---|---|
| Blastx | Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 from Arabidopsis with 64.87% of identity |
| Eggnog | leucine Rich Repeat(COG4886) |
| Kegg | Link to kegg annotations (AT5G06940) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426200.1) |
| Pfam | Leucine rich repeat N-terminal domain (PF08263.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |