| Id Trinity | FTRINITY_DN58270_c1_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_119333 |
| Sequence | TCTCATTGTTTCTTCGTTCAGTTTCTAGCTGAATTGAGCTTGATCCTCTGCGCTTATAAAGTGTCGTTTTTGAATTTTAGGTATCGTCTTGTTGTGTGTG TTCCTTGTTTTTGTCCTTTTGTTTTGGGCGCTGCTATTTTCATTTTATTTTTTGTGTGGAAAAGTTAGATCTATTGAGATAGGGGTGCCTATTTTTTTAT TTAATTTTATATTTATTTTTTTCAAATCTTGAGCACTGCAATATGGCTCATTGCTCAGCTTATCAAATACTGCAATAAATGTGTTCTGTAGTGTAGTGAC AGGATTTGGAGTTTTGGTTGGTAGGAAAATGAATTCAATGCTATATGGGTATAATAACCTTGTGGTAACTCTTTCCCTATATATTTGATTCAGGTTTAGG CAGGCATAATTAATTTGATACTATGATTAAATATTATGCTTTGTTTCTTTTTTGGGTGTGCAAAATCCATGCTTTCCTGGTTCAGAGGAGAGAGCATCAT TAATTACTCAGAGTCAGTGATTTTGCTGAAGTAGAAAAGTTTGCTATTTTCATTTAATATCACTCTGCTTGCAAAAGAAATACAGAAAATAAAATGAAAT TTAGTGGCTTGGTATAGCAAATTTAGGACCGTTTTCTTGGTTTTATCCTAACTTTCTTTTGTATATTTTAAGGCTTTCCTTTGTGGTCATGAAATATTTG ACAGAAACTGTATAATAAAAGATGAGACGAGTGAAGAATAATGAGATTGAAGATGATATGCTCCCCAATGATCTGACAGAGTCACAGTTGAATGATGAGG GTGATGGAGGAAGTGCCAGTGGAGTTATTCTGAAGAAAGGTCCATGGACATCTACTGAAGATGCGATTTTGGTTGACTATGTGAAGAAGCACGGGGAGGG GAACTGGAATGCTGTTCAGAAGCATTCGGGCCTGTCACGTTGTGGGAAAAGTTGCCGATTGCGATGGGCCAATCACCTAAGGCCAAATTTAAAGAAAGGG GCATTTACTGCACAAGAGGAGCGGTTGATTACTGAACTTCACGCAAAAATGGGAAACAAGTGGGCACGCATGGCAGCGCACTTGCCTGGTCGCACTGACA ATGAGATAAAGAACTACTGGAACACCCGATCCAAGAGGCGTCAACGGGCTGGCTTGCCACTTTATCCTCTTGAAGCGTGTTCTCAAGCATTCCCAGAGAG TCAACAAAGGCAAAGCACTCGTGGAGGAGTTAATGCTGGCAATAAAGTGCATCATGATTTCTTGCACAAAAACAGTTATGAGATACATGATGCAATATTT GACAGTTTGAAGGATAACCAGGGAATCTCACCTTATGTGCCTGAGCTTCCTGATATTTCTGATCATAGCAATATGCTAAAAGATCTTGATTCTTCTCAGT ACTTTAATTTTGTGCCGTCAACATCACCTAACCATAAGCGTCTTCGAGAGTCAACAATGCCATTTCTTGGTTCTAGTGATTGTGATATGCACAGAAATGT GTTTTATCCATTTGATCATATTCAGGATAATGCCTCGTTTGGAATGCAATCACCCCTTGATTATGGTCCCTCCTCACACAGCTCAATGTGTTACAGCCAT TCACTTTCAAATGGCAATTCCTCTACTTCAAAGCCTACTTATGAGGCTGTGAAGCTGGAGCTCCCTTCACTCCAATATCCGGAAATTGATTTAGGTAGCT GGGGTACATCTCCCCCACCTCCTTTGCTTGATTCGGTTGATGATTTCATTCAGTCTCCTGCACCAATTAGTGCAATGGAGTCAGATAGTTCTTCCCCACA TAATAGTGGCCTTCTGGATGCTTTAGTTTATCAGGCAAAGACTATGAGCAGCTCCAAGAACTATTATTCTAACAAGAGTTCAAACTCATCTACTGCAACT CCTGGCCACAGAGCAGACAGCTCTATGTTGAACATGTGCGAGACGGAATGGGAAGACAATACTGACCCTGTGTCTCCATTTGGTGCAACTTCTATATTGA ATGAATGTCCTGCTGTTGCCAATGCAAATTCATTGGATGAAACTCCACTCGATCAGACCTTCAATGGTTAGTGCCTTTCAGTGTGCCTGTGTGGCATGAA TGATGGTCATTGAAAACACTTCCAAACATTTATACTCATGTTCAGATGCATCTTAAGTACAAACTGAAACTTGCTAATTACTTTGGAAATTTCCCGTTCT ATTATTTTGGTCATTGTTTTATATGGTGCCAAATATATTCCTAAAATCTGTTAAAAAATAATTGATGATCTTTTTTTATCAAATTAGACTTCATGAAACT CTATTTTACTCCAGAAAGCATACAAAGTCTTCATGCACATATAGTTTTTATTTTCTGCGATAGTTGAGGCAGCCCAATGAACAAGGTTCTCATCTAGTGG GGTCTGTGGATGGTAGATATGTGCAGCCTTATCACCACAAGCGAAGAGACTCTTTCTAATATTTGAACATATGACCTTCAGGTCACAAGGCAAATAATCT TTTTGTTGTACTGAGGTCACCCTCTTTATTTTCTGTGATAGTTAGCATCATAAAAAAATTCATCTATCATTTTTTATGAAAATGCATGTATTAGGTTTTC TCGTTAATTCCTATATTTTATCAATCACCCAGATTCTCAAGATCTATAGATATTCTATTAAAAGTTGAGGGTTTATTTGGATTTCATGCAGGGAATATTG TGAAATTAGAGTCTGCTGACCAGGTTTGGACCCCAAGCAGTGGAAATCAAACCATGTCTATGTTAAATTTTACTCGGCCAGACTTGTTGCTTGATGCAGA TTGGACAGGATTCTGGGCATGTCAAGAACCAAACAATCACAACTGATGCTATATCAACCCTTTTAGGAGATGATTTAGCCACCCACTACAAGCATATGAG TGCTGGAATTTCTAAGTCATGTCAGGTATGGGGCTTTGGTTTTTCTGCACAGAACAGTGCTCTTCCTGTCTGGCCGATGTCTGATCTAGGTCAAGAAAAA TGCTATGACATTTTTGTTTGAAACTTATTCATAATTGTAATAATGTTGATTTTTTAATATGGTAGCCAGGGGGTAATATCTCCTATACTGAGATTTTATA TTGGGTGATTTATAGTTTGAAATAATTGGTCTGAGACAGGTGTTTTCTTGTAGCTTTATCAATTGTTTTCTTCTGGTGTTGCATGTGTTGTATACCACCA TGAATCTTGTTCTACACTGATGCTTTTGCAGGCTTTTTATTAATATGTAGAATAAGTGAACATTACCTTTCTAATTGGATTGGAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_75621; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_119333
| Blastp | Transcription factor GAMYB from Oryza sativa with 45% of identity |
|---|---|
| Blastx | Transcription factor GAMYB from Oryza sativa with 44.09% of identity |
| Eggnog | Myblike DNAbinding domain containing protein(COG5147) |
| Kegg | Link to kegg annotations (4327362) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449331.1) |
| Pfam | Myb-like DNA-binding domain (PF00249.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |