Ll_transcript_120020

• Id Trinity: FTRINITY_DN58280_c0_g1_i16
• Name Transcript: Ll_transcript_120020
• Sequence: CCAGTCTTTTCCTGATTCTGATGCGGAAGGTTATTGCAGAAGCCCCAACCCTTTCTCCCACCTCCTCCTAAATCGAACCAGGATATCCTATTTTCATCCG AGACCGGTGATGATAAATTGGTGACAAAATGATGTTGGCGTTTTAAGCTGATTATTAAACTTTGCCCTCTTAGTTCCATTGGATTTTGAACCATATTTAA GATGGGCAAAGGGCTGCTGCAATAATTAAAGTCAGATGAAAATCCAAGAGACCGGTGTTGGCAGAGAGGCTGAAGTTATTAGTAATGGCTTTGAGGTTTA TAACGATTTCGGCAATTTCAACGGTGCTAAGTTTTGTGGGTCTGCAGTTTTGCGCAAACTTCTCTTTAGATACACTTAAATCAGATGGTCTACTTGGCTG GGATGTAATGCAATTGGACAATGCCAACCATGACACAAACTTACCTTTGGGTTTGTTTACTACTGTAGGGCTACTTGCGAATTGCACGATCAATCTATTT ATCCTTCTTAATCTTTGTCTGAAGGCTATGTTCTTCACAGAGTTGTATTCTTCTGAAACTCGTAAATTAATTGAGCGTCTCATTAATTATGTTGTTTACA AGGGGATGTTCCTACCACTTATTGTGCCACCAACTATATATCAGGCTGGTCTTTGGTCAATTTGGTTGGCTGTGCTCTGTTCTTTAAAGATGTTTCAAGC TTTAGCCAGAGATCGTTTGGAACGGCTGAATGCATCTCCATCTGCTACACCCTGGACATATCTTCGTGTATATTCAGCGTTGTTATTTGTTTTCTTGGTT GATGTTCTCTGGATAAGGCTATGTCTAGCGATATATAGAACACATGGGTCCTCTTTGTTTCTGTTACTATTCTTTGAGCCTTTCTGTATTGCTTTTGAGA CCTTACAGGCCATTTTGGTACACGGATTTCAGTTAGTTGATATATGGTGCAACAGCAGTGATTACAGAAGGCCTAAACTGTTTGACTCAATAACAGCAGG TTCATTATTGGAATGTAAAGGAATTCTTATTCGGAACTTGGGATTTTTCCTAGACATGGCAACATTTTTTATGGCACTAGGCCATTACATGTATATATGG CGGCTTCATGGTGTGGCATTCCATCTTGTAGATGCAGTGCTATTTCTAAACACACGTGTAAATATTTGTGTAGATATTTCATTTTTAATTCTGGTTAAAT TTGACTACCAATAAAAATTTAACCAACATTTGCATATTATGCTACTTGTATTCATTGATGTTTTGAGCAGGCATTACTTAGTGCAATTGTAAATCGCATA AAAGGCTTTATTAGGCTAAGGATAGCTCTAGGTGCTCTTCATGCAGCTCTTCCTGATGCAACAACTGAGGAGCTAAGAGCATATGATGATGAATGTGCTA TTTGTAGAGAACCCATGGCTAAGGCTAAAAAACTAAACTGCAATCACCTCTTCCATCTTGCATGTTTGAGATCTTGGTTGGATCAAGGCTTGACTGAGAT GTATACTTGTCCTACATGCCGAAAGCCTCTTTTTGCAGGCCGACCTGAAAATGAAGCTAACGCCACTACGGAGGAGATATCTAGTGATGAGCAACTTGCG CGCCAAATAAGTGCAGGACTTGATCGGGCAAACTCTGCTAGACATACCATTCCTACAGGGTTGTATCCCAATCAGACACCTAATTCTATTGAAGGTGTTC CTTGGAGGGGTGCAGGACTGGATGCAGGTTGGTTGCATTCATGGCCAAATGAAGGCATTGATGGAGCTGGCCCATCTACTGCAATCAGAACAGTTGGAAT CGGAAGAGTTCAAACGATGATGAGGCATCTTGCATCGGTTGGAGAAACCTATGCTCAGACTGCCTTTGAAGAACCTGCTTGGAGCCTTTGGCCTATTAAT CCCTCTCAGGCTTCTGCAAGTGGTTCAACCATCCCTTCCCCTGGTGGACGATTGCCAGGAGGAAATGGCAGTTTACACATAAGGACTGCTTCACAATCTG CAAATGATGATTTGACGAATATACTTACTATGGCTGAGACTGTTCGGGAGGTTCTACCTCATATTCCAGACGACTTAATATTCCAGGACTTGCAGAGGAC ATTTTCTGTGTCAGTTACTGTGAATAATCTTCTCCAAATGTGATGTATTATGAGGAATCAAGGTGGTGGAGTTACAACTATCCTGGGAAAGTCATAGGCT TCATTTTATGTATATAGAGTTATCACATTTAATTTGTTGTAATCCAGAAATATAGCAGAAATATAGGTTTTTTCCTTCTCTTATTCTTTCCCTTGGATTT GTTGTATAATAAATATGGTGTATGTTGCCAAGTTGTTAAGTTTCCATCTATGCTGCAACTTTCTTTCCTTTCTTCCCTTTTGTAGAGGCTGCCCTTTCCA TCCATTAAAAAAATTATAAATAAATGGTTTTTCTGAAATGGGTTGGATTAGTGTAGTGATTTGTTTCACTATTCATTATGTTCC
• Tissue: flowers
• Gene name: LI_gene_75704;
• Additional information: details;

Expression of Ll_transcript_120020

FPKM

• FPAB: 1.1
• FPNAB: 0
• LF1: 0
• LF2: 1.1
• LF3: 1.4
• LF4: 0
• UF1: 0
• UF2: 1.3
• UF3: 0
• UF4: 1.8

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_120020

• Blastp: E3 ubiquitin protein ligase RIN2 from Arabidopsis with 65.7% of identity
• Blastx: E3 ubiquitin protein ligase RIN2 from Arabidopsis with 69.42% of identity
• Eggnog: zinc ion binding(COG5243)
• Kegg: Link to kegg annotations (AT4G25230)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427183.1)
• Pfam: Ring finger domain (PF13639.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;