| Id Trinity | FTRINITY_DN58280_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_120005 |
| Sequence | AATTATTATAAAGATTTATTAACCATTTAAGGAAGAATATAAATATATGATATAGTTTGTGTTCCTAAATTCTGACACGAAAGGTTATTGCAGAAACCAA ATCCTTGCTCTCACCTTCTCCTCCTAGATCGATTCAGGGTATTGTATTTTCATCTGGAGACCGGTGTTGGTGAATCGCGAGAAATTGACGATGTTGGCAT TTTAAGCTGATTTATAAACTTTGCCCTCTTGTTCCATTGGATTTTGAACCATGTTTAAGATGGGCAAAGGGCTGCAATAATTAAAGTCAGATGAGAATCC AGGTGACTGGTGTTTGCAGAGAGGCTGAAGTTATCAATCATGGCTTTGAGATTTATAGCGATTTCGGCAATTTCTACGGTGCTAAGCTTTGTGGGTCTGC AGTTTTGCACAGACTTCTCATTATATACAGTTAAATCAGATGGAGTTATTGGCTGGAATTTAGTGCACTCGGACAATGCCAACCAATACACCGTCACCGA GTTACCTTTGGGTTTGTACACTACCATAGGGCTACTGGCAAATTGCACAACCAATGTATTTATCTTTCTCAATCTTTGTCTTACGGCTATGTTCTTCACT GAGTTGTATTCTTCTGAGACACGTAAAATGATTGAGCGTCTCATTTATTATGTCGTTTACAAGGGAACATTCCTACCACTGATTGTGCCACCAACTATAT ATCATGCTGGTCTTTGGTCAACTTGGTTGGCCGTACTTTGTTCTTTAAAGATGTTTCAAGCTTTAGCCAGAGATCGTTTAGAGCGGCTGAATGCATCTCC ATCTGCCACTCCCTGGACATATTTCCGCGTATATTCAGCATTGATATTCGTTTTATTGGTTGATGTTCTCTGGATAAGGCTATGTCTGGCGATATATAGA ACGCATGGGTCCTCTTTGTTTCTGTTACTATTCTTTGAGCCTTTCAGTATTGCTTTTGAAACCCTACAGGCCATTTTGGTGCATGGGTTTCAGTTATTTG ATATATGGTGCAACAGCAATGATTGTGGAAGGTCTAAACTGTTTGACTCATTAACAGCAGGTTCACTATTGGAATGGAAGGGTCTTCTAATTCGGAACTT CGGATTTTTCCTAGACATGGCGACATTTTTTATGGCACTAGGCCATTACCTGTATATATGGCGGCTTCATGGCATGACATTCCATCTTGTAGATGCAGTT CTATTTCTAAACATACGTGCATTACTTGGTGCAATTGTAAATCGCATAAAAGGCTTTATTAGGCTACGGATAGCTCTAGGAGCTCTTCATGCAGCTCTTA CTGATGCAACGACTGAGGAGCTAAGAGCATATGATGATGAATGTGCTATTTGTAGGGAACCCATGGCTAAGGCTAAAAGGCTAAACTGTAATCACCTCTT CCATCTTGGATGTTTGAGATCTTGGTTGGATCAGGGCCTTACAGAGATGTATACTTGTCCTACATGCCGGAAGCCTCTTTTTGTAGGCCAGCCTGAAAAT GAAGCAAACTCTACCACAGAGGAGATATCTAGCGATGAGCAACTTGCACGCCAAATGAGTGCAGGACTTGATCGGGCAAACTCTGCTAGACATACCAGTC CTGCAGAATTGTATCCCGATCAGACACAAAATATTGTGGAAGGTGTTCCTTGGAGGACTGGATGCAGGTTGGTTGCATTCATGGCCAAATGAAGGCATTG ATGGAGCTGGCCCATCTACTGCAATCAGAACAGTTGGAATCGGAAGAGTTCAAACGATGATGAGGCATCTTGCATCGGTTGGAGAAACCTATGCTCAGAC TGCCTTTGAAGAACCTGCTTGGAGCCTTTGGCCTATTAATCCCTCTCAGGCTTCTGCAAGTGGTTCAACCATCCCTTCCCCTGGTGGACGATTGCCAGGA GGAAATGGCAGTTTACACATAAGGACTGCTTCACAATCTGCAAATGATGATTTGACGAATATACTTACTATGGCTGAGACTGTTCGGGAGGTTCTACCTC ATATTCCAGACGACTTAATATTCCAGGACTTGCAGAGGACATTTTCTGTGTCAGTTACTGTGAATAATCTTCTCCAAATGTGATGTATTATGAGGAATCA AGGTGGTGGAGTTACAACTATCCTGGGAAAGTCATAGGCTTCATTTTATGTATATAGAGTTATCACATTTAATTTGTTGTAATCCAGAAATATAGCAGAA ATATAGGTTTTTTCCTTCTCTTATTCTTTCCCTTGGATTTGTTGTATAATAAATATGGTGTATGTTGCCAAGTTGTTAAGTTTCCATCTATGCTGCAACT TTCTTTCCTTTCTTCCCTTTTGTAGAGGCTGCCCTTTCCATCCATTAAAAAAATTATAAATAAATGGTTTTTCTGAAATGGGTTGGATTAGTGTAGTGAT TTGTTTCACTATTCATTATGTTCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_75704; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_120005
| Blastp | E3 ubiquitin protein ligase RIN2 from Arabidopsis with 65.45% of identity |
|---|---|
| Blastx | E3 ubiquitin protein ligase RIN2 from Arabidopsis with 65.6% of identity |
| Eggnog | zinc ion binding(COG5243) |
| Kegg | Link to kegg annotations (AT4G25230) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427192.1) |
| Pfam | Anaphase-promoting complex subunit 11 RING-H2 finger (PF12861.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |