| Id Trinity | FTRINITY_DN58327_c1_g2_i18 |
|---|---|
| Name Transcript | Ll_transcript_211994 |
| Sequence | GAGGATCACTTGTCCCAAAGTATATCCCAACGAAAATATGAATCTTTAATAATTTTTTTGACTGATGTGGGATGTTGGTGTGAGACAGCAGATCCTGGTC CATCCCGAGAATGAAGAATAAGAAGAAGAGTGAAACGTACGTAACTGCATTTTCTTAGATCTGAACATCGCAATGGAGAAATCAAGCGCATTGGAATATA TCAATCAAATGTTCCCCAATGGTATTACATTACTACTACTACTTCTTCTCTTTTCTATTCAATCTCAATAATATTCATATCCTCATTGTTTACTATGCAA AACCATAGAGCCATCTTTATCCGGCGTTGAACCACTCATGCAAAAAATTCAGAACGAAATTCGCACCGTTGATGCTGGTATTCTAACCGCTGTTCGTCAA CAGAGTAATTCAGGGACTAAGGCGAAACAAGATCTTGCTGCTGCTACATGTGCTGTTGAGGAACTCATGTATAAGATCAGAGAAATTAAAACTAAAGCTG TTCAGAGTGAGACAATGGTTCAAGAAATTTGCAGAGATATTAAGAAATTGGACTTTGCTAAGAAGCATGTCACTACAACTATCACTGCACTTCATAGGCT TACTATGCTTGTCTCTGCTGTTGAACAGCTTCAGGTCATGGCTTCTAAACGTCAATATAAAGAGGCAGCTGCTCAGCTGGAGGCAGTGAACCAGCTATGT AGTCACTTTGAGGCCTATAGGGATATTCCAAAGATCATAGAATTGAGGGAGAAGTTTAAGAATATCAAGCAAATACTAAAGTCACATGTGTATTCTGATT TTTCCAGCTTAGGTACCGGAAAGGAGACAGAAGAAACGAATTTGCTCCAGCAGTTGTCTGATGCCTGCTTGGTTGTTGATGCATTAGAACCTTCTGTAAA GGAAGAGTTGGTAAATAATTTCTGTAATAGGGAGCTTACTTCGTATGAGCAAATTTTTGAAGGAGCTGAACTAGCAAAGCTGGATAAGACTGAACGAAGA TATGCTTGGATTAAGCGCCGAATGCGATCGAATGAAGAAATTTGGAAAATCTTTCCATCTTCATGGCATGTTTCTTATCGGCTTTGTATCCTATTTTGTA AGAAGACAAGGAAACAACTTGAGGAGATTCTTTCTAATCTAAAGGAAAAACCAGATGTTGGGACCTTGTTGCTGGCTTTACAGCGAACTTTAGAGTTTGA GGATGAATTAGCTGAAAAATTTGGGGGAGGCACACAAAACAGGGAGATTGGGAATGAAATTGAAGAAATAGGTAGAGGGATTAACTCTAGCACTAATGCT TCAGATATCCGGAAGAAGTATGAAAAAAGACTTGCTGCACATCAAGGAACTGACAGTGAAGAAAAAGATGGAAGTAAAGATTTGGCAGTGCCTGGAGCTG GGTTCAACTTTTGTGGGATCATTTCATCTTGCTTTGAACCTCACTTAACAGTATATGTAGAATTGGAAGAGAAAACACTAATGGAAAGTTTGGAGAAACT TGTTCAGGAGGAGACATGGGATATTGAGGAGGGAAGTCAGAATAGTATTTTATCCAGTAGCATGCAGCTGTTTCTTATAATCAAGAGGAGCTTGAAGAGA TGCAGCGCTTTAACAAAGAGCCAGACACTATATAACTTGTTCAAGGTTTTCCAAAGAATTCTTAAAGCATATGCTACAAAGCTATTTGCAAGAATTCCAA AGGGGGGCACAGGCATTGTTGCTGCAGCTACAGGCATGGATGGGCAGATAAAGACATCTGATAGGGATGAAAGGGTGATTTGTTACATTGTCAATTCAGC TGAATATTGCCACAAAACGGCTGGTGAACTATCTGAAAGCGTTTCTAAAATTATTGATCCTCAATTTGCAGATGGGGTGGATATGTCAGAAGTGCAAGAT GAATTTTCAGCTGTTATAACAAAATCATTGGTGACTTTGGTGCAAGGCCTGGAAACCAAATTTGACAATGAAATGGCAGCAATGTCACGCGTTCCATGGG CTACTCTTGAAAGTGTTGGTGATCAATCAGAGTATGTAAATGCCATAAATTTGATCCTCACCACTAGCATTCCTGCACTCGGGAGTCTACTTTCACCTGT GTACTTTCAATTCTTTCTGGACAAGTTGGCATCATCTCTTGGTCCGCGGTTTTATTCTAACATTTTCAAATGCAAGCAAATATCAGAAACTGGAGCTCAA CAGGATATTTTTTTATGGAAAAGGAAATATTATTAGATGAGAAAAGAAGGGTACAGGAAGATAAAACATCCTCATAAGCGAGCAAAGAAGATATAGCTAG AACCTACCAGATTGTGTCATGCAACAAAGCATGCCAATCTCTTTGCATGTCTAACAGAGAAAATCAATAGAGAGATTATGATTACATTTTGCCAACAATA AACCACATAACAGCAAATGTAGAGCACTGCCATAGGATCTTTGCTTCTTTAAGAGTGCCAAATCCCCTTAACTTTGTAAGGAGCAAATGGTTCAAATCCA TTGTGTAGAAGACCCAGGTTTCTCCAAAAACTAAGCAGCTGCTTCCAAAGATTACCTTCCAAAGACAATTTTATGCTGAACAATGAAGTGGTGGACCCTA TTCTGTGGCAAAGCGGCACATTATAAGCATATTAGGAGATACAGTAGTGATAGATCTGCACTTTTCGAGCATGTTGTAGGTGTTATTCCTATCAAGAATA GCAGTTCATGCGGACACTGACTTCCAAGGGAGCTTTGGGCTTCCTAATGGGCTTTTCAAAATAACTTTGTCTCTATTAGGAGCAAGTCACAAGCTGAAAA GTAATATTTACATGAGTGAGATCCCAAAGATTCAAGAGTTCAAGGTCATGTATCAGGATTGGAAAAGGATGGTTAGGTTCAAGCAAAATAAAAATGACTA ACCTCTCTATCAAGTAAGTTTTTGATAGACACTAACCAACTGTCAACCCCTTAACCAACCCAAGACACTAAACAACTAAGCACATCAACCACCATAGTAA AGAGGAATGGGGAATCGGATATAGAGGACTCCCTTGCCTCAACCTCTCTGAGCCATAAACAATGATTTTGTTTCAGCATTGAGACTATAACAGCAAAAGT GGGAATACCTTGTTTCTGATAGATACAAAATTTTTTATTAGGGGAGGCTTAATATATTCTCCCAGAACACAAAAGTCAGGATGCAAAAAGGAGCTTGAAG AAAATAGAAAAACGAATGCAGCAACATTGACCATTGTTTTTAATATTCTAATGAGATCCCTATCAAGAGCCTTTGAAAATAGTTCAATAAATAAAGACAT ACTCTCCTACCAATGAATTTTGGGTTTAGAACCCATAATATTCCATGCTTATGTTTTAGGGAAGAAAGGATGCTACTGGAACAAAATATTTGACAAACAC ATAAAAAAGGGTGTCAGACTGTCACTTGCACAAGACTTTCACCCAATGGGGTATGGGGAGAGTAGACGTACATAGCCTTACTGTCGCAAGCGAAGAGTCT ATTTCCAAGATTTGAACCCATGATCCCGTCACAAGACAAAAAGCCTTACTGTTGATAAACACATACTGACAAAATTGTTATTGAAGATATTTGGAAACAT ATGCAACATTATTTAGCATGTATTTCATTTTATTATTTTGTACTTTCCCTTCTTTTCGGTTTTGATACTGACTTGCTCTGTCTTTTCGTTAAACTGGTAT TGATGTATCAATGAAACTTATATTACACTATTCTGTTTTATGAGAAACTCTTGAAAACCCACTCTTGATGTTTTAATACGCTAATTATGTGTTGATTTTG CAGATGCTATTGGATACCCAAGCTATGAAGACAATCCTTCTTGAAATTCCTTCCCTTGGTAGACAGACATCAGGTGCTGCTAGTTATTCCAAGTTTGTAA GCCGTGAGATGAGCAAAGCTGAGGCCCTCTTGAAGGTTATACTTTCCCCAGTTGATTCTGTAGCTGACACTTACGGTGCATTGCTACCTGAGGGTACACC CATGGAATTTCAGCGAATATTGGAGCTTAAGGGTCTTAAAAAAGCTGATCAACAAAGCATACTAGATGACTTCAACAAACATGGACCTGGAATTAAACAA ACTCAGATTACACCTTCAGTTGCCCCAGCTCCACCAGTAGCTCCTGTGGTACCCAGCCCCAATGTTGCTGGACTCATAGCTTCGCGCGAGGATGTGCTAA CCAGGGCTGCTGCACTCGGACGAGGAGCTGCCACAACCGGGTTCAAGCGGTTCCTAGCTCTAACTGAAGCTGCCAAAGACAGGAAGGATGGGCCTTTCCG GAAGCTCTTCAATCCGTAATGAACATAGTGATATATTACCCAATTTTTTTGGCTAAAAGCTTTTGTTTTTTCTTTTCATTTTAGTTGTCTCCTTTTGTTG TAGGTCTACTATCTGATTCTGTCTGTAATATTATTATCATGTTTGTCTGTATTTCATCAATCCACTAGAAGTTGTTTTGCAAACAAAAAGATCTAAAAAC TTGCATCATTATTTTAATGACTCATCTTTATTGAATAAATGTGGAGAAGTACCATAAATAGATTTTCTATGAATTTTCTAAACATTAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_76112; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_211994
| Blastp | Vacuolar protein sorting-associated protein 53 A from Arabidopsis with 80.03% of identity |
|---|---|
| Blastx | Vacuolar protein sorting-associated protein 53 A from Arabidopsis with 76.8% of identity |
| Eggnog | Vacuolar Protein(ENOG410XNMT) |
| Kegg | Link to kegg annotations (AT1G50500) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419582.1) |
| Pfam | Vps53-like, N-terminal (PF04100.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |