Id Trinity | FTRINITY_DN58331_c0_g1_i1 |
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Name Transcript | Ll_transcript_211154 |
Sequence | CTCATAGCTACACACTACAAGCTCATAGTTACAACCTCGTAGCTATAAGCTATTTTCAAAACAATGTGATAGAATATATCAGAAAAATAATTTTAAAAAA TACTAAAAATAACTAACGTAACTTTTATTTAATATATTTTAGTCTCATTTTGAATAAATGAATTTGATGCAAATATTTTGAGTGGCACAAAATGAATTTT GACTCAAAATGAATATGTAATATTGTAATTTTCTCTTTTGTAGAATTAGGGTTTGTCACTCTTTACCCTTGCCTTAGCCTCACGCAGTCTACGGCTCTCA CACTCACACTTCCCTCTCACACACTTCATCTGCACCGTCCCTCTTCCTCCCCGCCGTTGATTCTCGCTCCGGCCACCTTAATCCGCCGTAGCTGCCACCC CTCCACCTTCTTTCAGATAGTTTAGCATCAAATATTTGTAAAGTCATAAAACACTTGCAAAATGGCACGGAAGGGTTTGATGGAACAAGACCTGAAAAAA TTGGATGTCACAAAATTGCATCCACTTTCTCCTGAAGTCATATCTCGGCAAGCTACCATTAATATTGGCACCATAGGTCATGTGGCACATGGTAAGTCAA CAGTTGTGAAAGCAATATCAGGCGTTCAGACTGTACGTTTTAAAAATGAGTTGGAGAGGAATATTACAATCAAGCTTGGCTATGCAAATGCAAAGATATA TAAGTGTGAAGATGAACGGTGTCCAAGGCCTCTGTCCTATAAGGCTTATGGGAGTGGAAAGGAAGATACTCCTATGTGTGATGTGCCAGGGTTTGAAAAC AGCAAAATGAAATTGCTGAGACATGTTTCTTTTGTGGATTGCCCAGGACATGATATTCTCATGGCTACAATGCTTAACGGAGCAGCTATCATGGATGGAG CTTTGCTACTCATTGCTGCTAATGAGAGCTGCCCACAACCACAAACCTCTGAGCATTTAGCTGCTGTTGAAATTATGCGTCTACAGCACATTATAATCCT TCAGAATAAGGTAGACCTGATTCAAGAAAATGTCGCAATCAATCAGCATGAAGCAATTCAGAAGTTCATACAAGGAACTGTTGCTGATGGTGCACCAGTG GTACCTATTTCAGCACAATTGAAGTATAATATTGATGTTGTGTGTGAGTATATTGTGAAAAGGATACCAATTCCTGAAAGGAACTTCATCTCTCCCCCTA ATATGATTGTTATTCGGTCATTTGATGTCAATAAACCTGGGTTTGAGGTTGATGATATTAAAGGAGGTGTAGCTGGTGGAAGCATTCTAAGGGGTGTTTT GAAGGTCAATCAATTCATTGAAGTTCGACCTGGTATAGTTGTTAAAGACGAGGTTGGAAATATCAAATGCACACCCATATACTCTAGAATAGTTTCACTG TTTGCTGAACAAAATGAGCTTCAGTTTGCTGTGCCTGGAGGGTTAATTGGTGTTGGGACAACGATGGATCCCACTTTGACACGGGCTGATAGGTTAGTTG GGCAAGTTCTTGGAGCGGTTGGATCATTGCCTGAGGTTTTTGTTGAGCTTGAGGTAGGTGGCCATGTCTAACTGTTTATTAATTTATGTGCATCTACCAT AAAATTTGGGTTGTCAATCACCTTGCTATGTTTTGGAGTTCATAAGTGTGGATAAAGAGCTTACTTTTCATGATATCTATATCCACCACTTTTCACAATA TGGTCTTGCAGGTAAACTTTTTCTTGCTTCGGCGGCTTCTAGGTGTCCGGACAAAAGGCACCGAGAGACAGGGAAAGGTATCTAAACTGGCTAAAGGAGA GATGCTAATGTTGAACATTGGATCAATGTCAACTGGGGCCAGAGTTGTTGCTGTGAAGAATGATTTGGCCAAGTTGCAACTTACTTCCCCTGTATGCACT AGCAAGGGCGAGAAGATCGCGCTTAGTCGACGTGTTGAGAAGCACTGGCGTCTTATTGGGTGGGGTCAAATCCAAGCAGGAATCACTCTAGATGTTCCTA GTGCCCCCTTTTCAGTTGCAGACATAGTAGAATAGACAAAGAAGAAACCCTTGTTACAAAATTGAGAGAGGAATTTAGAGATGTGGGAAGGGAGACAATT GTTGGGAACCATTTTTTTGAGGTGGAGAAGAAAACGTTTGGTTTGTCCAATTTTTGTTCTACATTATTTGGTTTTTATCCCTGTCTACTTACTATATAAG TTTTATCTTAATGTCGATTGAGTTTAGGTTGGGGTGAGCATATCAACGAGTACGTGTTGATTTCAATGGTTACACAGTAAGCGTTACTGTTCAGGCATAT ATGATGCATTCCTTACTCCTTTTTGAACAGTGCTTGAAGCTCTTCTTGTGATGAATGTGTTGTGACTGTTCTAGTATAGGTAAAGATGAGATTACAGAAA GGTTTATGCAATGTTAAGTAATGGGATGCAGACATTAAATTGAAAGAGTATGATTGCATATAATATATGAAAATAAAGAATCTCAGATAATTA BLAST |
Tissue | flowers |
Gene name | LI_gene_76130; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_211154
Blastp | Eukaryotic translation initiation factor 2 subunit 3 from Sophophora with 74.59% of identity |
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Blastx | Eukaryotic translation initiation factor 2 subunit 3 from Sophophora with 74.59% of identity |
Eggnog | translation initiation factor(COG5257) |
Kegg | Link to kegg annotations (Dmel_CG43665) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019461644.1) |
Pfam | Elongation factor Tu GTP binding domain (PF00009.26) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |