Id Trinity | FTRINITY_DN58360_c3_g1_i7 |
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Name Transcript | Ll_transcript_210715 |
Sequence | TTCAAACGTGCCACTTGAACCATAACTAGTCAGAATTAAAGAAAAACATTTTTTTATTAAAAACAAAAAGGCAACAAAATATGGCACCTCACAAAATAAA ATAAAATCATAAAATTTTCAATATTTGAAGAACCCTAAACCAGAAAAACATGTTTTAAACTTTAGTATATATGAACCTAGTGATGTTTACATGCATCTTC TTGCATAGTTTGTGGTTCTTGACCACACAAATATAAAGTAGACATTGCTTTTCTTGTCTCTCCTATTTGTTCTTATCTATCTTCCAACAGACACAAACAC AAAACATATGACACATCCCATATTCACTAATAATAGCTTTTACCACCTTAGTTAAACACTGCCAAATACATAGAAACCTCAAATTTGACAAAAAAATAGT GCTACAACTCTCTCTCTCTCTCTCTCTCTGTAATCTTATCTTCTTTTAGTTTTCAGCTCAAAACCCTTTATAGTGGTGAATGCTGAAAACAGCATACTGC ACTATATTGTTTTTGCTGATACACTTTCAGAGTCATAAGTACTTTGCATATTTCACTGAAGCCAACAATATTGTACCACTATGTAATGTTATTGAAGTGA GGAACTTGCTCCATCCATTTACCTCTTAGGAATATAGTCATACAAAGAAACATGATGACTCCAAACTTGAACTTGGAACCTGAAAACAATTCAGAAGAAT GCAGCCAAGAAGCTTCTAATATATCATTGCAAGAAACACCCTATGATCTTAATCATACAAAGGAAAGTACAACAAGTTCTTCATGTCTTACAAATCTCAC CAATGCAGCTTCTATGACCCTTGACTTAACACTAAATTTCAACTCAAATGATGCTAAGTTCAAAGGTACAAGTGACACTAGCACCAATATAGGAGCTGAA GCATTAGCACCAGCAACAGAAACTCCAAGAGTTTTCTCTTGCAACTACTGCAGGAGGAAATTCTTTAGCTCACAGGCATTAGGGGGTCATCAGAATGCAC ACAAAAGAGAACGGACGATGGCGAAGCGCGCGATGCGGATGGGAATGTTCAATGAGAGGTATACAAACTTGGCATCTTTACCTCTTAAAGGTTCACCTTT TAGGTCTCTTGGTATTGAAGCTCATGCTGCAATGCACCAAAGATATATGCAAATGCCATCAGCACTAGTAAGGGTACCTGATATGAAAGGTGGTGCCAAG TTTGAGAGAAACCATTTTGGAGCACCAATTTTCATGGCTGATGATGATGTTAGTCTATTTTGGCCTGGTAGTTTCAGAAGAGTGGAACATGGAAGTTGTG TTAATCTTGGACATGCTCAAACTTCAAATACCAGTTTTGTTCCAATGCCACTTCCTCCGCCACAAACTTCTTCATCGCCGGATCTTACTCTGAAGCTTTA GGGCCCGTCTGCGAGTTTGGTTTTGGAGAATAATGAATAAGTCATCTCACAAGTGTATTTCATGACTCTCAAGTATCTCATTTCTCTCTATTCTCCTTTA AAACTCAATTCGCAAATGAGCCTTAAGATTTAAGAAATGATACATACACAGACAAAATCGTCACGAACCCCTCGTAAAACAATAAGGTAGCGTTTTGGCG AGTGATCAAAACATGTATTGCTCTCCTTGGTTCCACTTTTTAGTGCAACCAAAGTACCTCTTCACCGTGTCTTATGTTTTGTTCTATTTATCGAACACAT TAAACATAGAATAAAATATGTATGTTCTATTCAGACATGTTTATCAAACGTTGCCTTAACGAGTGATCGGGAAGCGAGTCATACATCACTTTTTTCTCAT CTCTCGGAATCAAACTTGTTTTGCTAGGGGTTTATGGAGGCTTTGCGTTGTGTATGTATTATTTCTATAAAGATTAAAGATTTTTCACCAATGATTTAAT CATCTTCACATGTGAAATTATTATTAGTGCTTGTGTTGTAAAATGGACAAATTAGCTTATTTCAATTTCCTATAACTAATTGCTTTCCTCTAATTTGTAT TTCACTTCAATCATTTATGTTGTAAGTATACCATGTAAGCTTAGGAATTCAGACTAAATTAATATTCTATGTCTAAAATGAGTG BLAST |
Tissue | flowers |
Gene name | LI_gene_76410; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_210715
Blastp | Zinc finger protein 4 from Arabidopsis with 44.32% of identity |
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Blastx | Zinc finger protein 4 from Arabidopsis with 44.32% of identity |
Eggnog | Zinc finger protein(ENOG410ZCT7) |
Kegg | Link to kegg annotations (AT1G66140) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019448359.1) |
Pfam | C2H2-type zinc finger (PF13912.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |