| Id Trinity | FTRINITY_DN58385_c1_g4_i4 |
|---|---|
| Name Transcript | Ll_transcript_210439 |
| Sequence | GAAAACAGAGTCAGCAGTCGCAATTCCAAGATCCACAGCATCCCGATTTCCGCTTTCTCTCTCCCAGATGGAGAAAGGCGAGAACTCTTCCACCACCGAA CAAGACTCCTCCGACAACCACAAGCACCCAACGCGCCACCACCTAACTCTCCCTTCCGGCCTCACGCCTGACGAGTTCGAAACCCTCAAACCCGCCATCA CAGAGCACCACACCTACCTCTCTGGCCCCGGCCAATGCTCCACACTCCTCGCCCAGCGCATCCACGCGCCACCACAAACCGTCTGGTCCGCCGTCCGCCG CTTCGACAAGCCCCACCTTTACAAACACTTTATCAAATCCTGTTCCGTTAAAGAACCCTTTAACATGAGCGTGGGGTGCACCAGGGAAGTTAACGTGATC TCAGGGTTACCGGCTGCTACAAGTACCGAACGCCTCGATATACTAGACGATGACCGACACGTCACGGGTTTCAGCATCATTGGAGGCGAACACCGACTCA GGAATTACCGTTCCGTCACGTCGGTTCACGGGTTCGACCGTGATGGTGAGATCTGGACCGTTGTTCTCGAATCTTATATGGTGGACGTGCCTGAGGGTAA TACTGAAGAAGACACGCGTCTCTTTGCTGATACAGTTGTCAAGCTCAATCTCCAGAAGCTAGCTTCTTTAACCGAAGGAATGAACCGCCACGGTAAGTAA GTCATATTTAACCTGAACCGGTAACCTAAACCGCTAAACCCGGTTCAGACCCAAATTTACCAAAAAATGTATTGGAATTTGAAAGAAAGTTTCCCACGAA CTCCGGAGAAAAACGAAATCCGGAGTTTTTTCTCTTCGTTCTCTTGGTTTTGGTGAGATTGTTATTTTTATTTTTTTTATAATTTTATTTCCTGTTTTGT TCATCCTCTTCCACGTTTTCGCAAACTTCCTCTGTTTTCGTTGTTACAAAAAACGTTAATACAATGACAGAGGGCATTTTGGTGAATGCAGCTTTTGTAC AGAACATGTTGACTTGTGGATGTTGATGGTTGTGTGGATATGCCATTTGCTTCTTATTTTATTCCTCTCCGTTTATATATTTGTGTTTGAGTAGTGCTAT ATTTTCCTATTAATCATTCTACTCAGACAAAAGTTGACATATGTCACTTATAATATGACACATGTCATCTTCTTGTGGATAGAAAGATGAATAGGAGAAT ATATCATTTTCATTTGTATTTTGCTGCGCAATACTAATGTAGGAAGATGCTTCATTTTCTCGTTTGGTACTATTTTATCATAGTTGAAATTTCTATTTAA TGTTATGCAGATTAATAGATACTCGTTACTTTTGAATGGTTTACATATATGAACATTAGAGAGAGAGAGAGAACAATTAATGGTAGGAACGGGCAGTCCC TTTTGGTGTGACAAAGTAAGTGAGATGCGTGATAGAATAAATTCTTTTTTGTCTTTTCCATTGAATTTGGACATCTTCCTCTTATCTCCTGACGCAACAC TCAGACCTACGTTGGATAATGGATATTTACTGAATTGTACTTAGATAAGGTAATTAGTTTTGTTGTTTATTTAGATACAAATCAACACTTTGTTTACTGA ATTGTACTTATTATGCTAAAGAATGTTGAAAATCTACGTTTGATTGTTAATAATTTAAGTTAAAAATGACAAAATTTTAATTGAATATTGTAATAATTAA TGGCATAAAATGATAAAAATTATAAGACTATAGAAAGTAGTTCTCTAATAAAATGGAGAGCTATATGACCACGCTATGAAAATCCAAGAAGGGTGGTTAA AATTATGAAAGCAAATACACATGTCAGTAATTACCAAACCTCTAGTTAGTGAAAAACAAAGAATTAACTAACTATACAAAGGTCAAAGATATGGAATAAT AGACATCATCCGTCTTCAAGATGAAGCCATGGCAAATAATACAATACTGTCAAGTAGAAATTATAGCTTTATCGATTACAAATCAGCATTCATAAATGTA ATTGCTATATCCAATGTCTAAACCAAATCAGCATTCGTTCTTATTTTAAGATTGTGAAGCACAGTTGATCGTTCTTATTTTGGTTTCTGTTGCATGCTTA AATTATGACAATGGTCAACAAAAGGAGCGTGATTTTTCAGTGGGACACCATGAGATACAAAAATGTCGGACAATGGATCCCCGTTCTTACTCTTATGCCT TGGTGCTACTTTCAAGTTTTAAATTCTTTCCACATTTCCCTTCTCCAGGCGAGTATTATTGGAATTCTTATATTATCATGTAATTGCTATATCCAATGTC TTCAATGCCTACATCTCCAATTTTTCACATTATTTTCACACTCCATCACAAGCATGATATGCCACATCTAAAGCCCTGATTCTTTCAATGAAAGTATATA CGGTTCTCATCTACTTTTATAATGATGCGGCAATATCGAAGGAAGTAACCACTTCTTCAAAAAGCAAGTCATGGTTATGTTCTGCAACAAACACATTCCT CATGAAATACTTCAATAGATCTTTTTAGTTTAATACGCATGAGAGCTTTGCACTCACATCTTGTTGATGACAATTTTTGGTGTCTGCTTTCATGCTAGAT GACAAAAGTCACGTCTTTTAATTTCTCTTCTTTTAACACTTAGCTTTTTGTGAAATATGCACCTTCATCATGAGGACAAATTAGCTTTGATGGCAAACAA GAACAAAGAAGAATAAAGAAGAAGAGAACAAGAAGGAAACTTGAAAATGAATAAGAAACTTGTATATAGGAGAAGAGATGAAGAATTGAGTTAATTTTAC AAGACTAAGCAACAAATGCTTATATACAAAGAAGAAGAAAAAGAACTTAGAAGCTAAAAACAGCAAAACAGAAAAATTGCCAAAAATGGAAACTGGACCT AAAACTAACTTAAGAGATTTTCAAAAAATTACTATAAAAGGAAATAAATGAAAAACAATTAGAATGGTCTTGGGCTGGTAAGAGGATGAAGATGGGCTTG ATGAGCTTCAGAATTATGCAAGCTTAACATCCCCCCACAAGCTGGCAAGAAGATGTTGATGATGCCAAGCTTGGAGATGAATTTTCGAAAAAGAGAAGGA CCAAGAGATTTGGTGAAGATGTCAGCCACTTGCAGAGTAGTAGAGATGGGAAGGAGATGGATGATATTGTTTTGCAATCTTTCACGAACAATGTGGCAAT CAATCTCAATATGCTTGGTTCTCTCATGAAAAACAGGATTGGAAGCAATGTGGAGAGTAGATTGATTGTCACAGAAAATTGTAACAGGTTGTGAGTGAGA AATGCAGAGATCCATGAGCAGAGAGAGGAGCCACTGAGCTTCACAAGAGGCCATGGCCAAAGCTCTATACTCAGCCTCTGAGGAAGACTTGGAAACAATT TTCTGTTTCTTACTCTTCCAAGAGATGAGAGCCTCACCAAGAAAGAAACACCATCCTGAAACAGACCTTCTAGTGTCCAAGCATGCTGCCCAATCTGAGT CTGAGTATCCTTTAAGAATGGTTGAATTGTGAGCAGGGAAGAATACACCTTGACCAGGTGAGTTCTTCAAGTATTTTAGAATCCTTGTGGCAGCTTGGAA ATGACCAGTTGTAGGAGATGAAAGAAATTGGCTCAAACAACCTACAGCAAAACAAATGTCAGGTCTTGTGTGAGTGAGATATAATAGCTTACCTATGAGT CTTCTATAGCTGGTTGGATCACTAAGAGGAGTGCCTGAAGTGGAGTGAATTTTGGAGTTATAATCCATTGGAGTATATGCAGGTTTGGAACCAAGAAGCC CTGATTCTTCCAAAAGATCAAGGGTATACTTTCTTTGATAAAGAGAGATCCCTTGCTTGGATCTAGCTACTTCCATGCCTAAGAAATACTTGAGTTTTCC CAGATCCTTAATGCTGAAGTTGGTATGCAGAATATGCTTGATGTGGTCAATTTCATGTTGATCATCACCTGCCAAGATTAAGTCATCCACATACACTAAA ATGGCAGTGAAACTGCAGTTAGTTTTCTTGACAAACAGAGAATAATCAGATAAACATTTAACATAACCTGCTTTGACCAAAGTGTGGGAGAGTTTGTCAT GCCATTGCCTACTTGCCTGCTTCAAGCCATAGATGGACTTTTCTAGTTTGCAGACAAGGCTAGAATCAGAGGGATGAAGCCCTGGTGGCACTTTCATATA GACTTGTTGATGAGAACCTCTTCAGGAGATCCTTTTTCATACAATAATCTATCTTGTTTGGTGTAAACATAAGAGAAAACCCACGGTTTTGTTGGGTAAA TTTTGAAGACAAAACTGGACAGAATTGAAAATACTAGGGATAAAAGAAGATGGATAAGAATGAAGGGTGAAGGCGCCACAACAATGGTGTTGATAAGCCA GGTGCTATTCGCCACAAGAACTTGGTTCTTGATAAGAATTTGTAATCTTGGTTCAGCCAAGAAGTTAGGAGAAAACTCTCACAAAAAGATAACAAGAAAC CTTGTATTTTTACTCTCAATCAAAAACTGAGTTTATTGAACAATGAGGTTACAACTTATAGGGGAGGCCACGGTTTGGGTCCATCCCCTACTCATTCATA TGGCTCATACAACAAAGGAAAGGAAAACAACTACCAAAATGCTATAACGGCTAGAAGTAAATGAAAATACAAACAACCAGAAACAATTCAAATTTTGAAT GCAATTAAGCCTTGGAAATTTGGTGCATTTAAGGTGATTCCTTGAGAATTCGGTGCTGGCTTGAAGGCTTGCACGAAATACACTCCCCTTCTTTAATAAC TGTTTGAAAATTGGCACAAAAGTATGAGGCAATTTGAATTTGCACAAAGTTTATTCCTCCTTATTTGAATAGGGACTTGAATTCGGCACAAATGAAATGG AATGAATTAATTCTGGTTCAAATGTTTAGAGATGGTGAATTCATGTATTTGACCCATCATTAAAGGCATGGCTCAAAGAATTGTGTTGAATTTGGCAGGT TCATGTATTCTCCATTGATGGCACGGCTCAAATTCATGTGCTGGACCAGGGAATTAAAGCTTGCACAAGTCTCTTGCCTATGAGTTAATATTTGCACGAA TTGCATCACATATTCATTGCCTCTTGACTTGATTATTCCAACTCCTATGCATCATTAATACTCTGGGTTGCATTCAATGCTCCTATTTATTTTGAAACAA AACACATTAAAACAAACATTAAAGGTTTTTAGGACACATTTAATGTGTCCTTAGCCATGAGCTAGCATGACCGTGCCCAAGCTAAGGGGGATGGAACATT TTGGTTCCCTCTTGGCCAACATGAGAAATAATTTAATGAAAAAGATGACTCCCTTGTTTTGAGCTGAGGGAAGTCCCCTTGATATCTTGAATGAGTAGGC TAAGTGCATTGTCCATTTGTTTGGCCCTTGCCCTTGTCATGGGCCCACCAATATTCCTCAATTCATCATTGGTTTGATTCGGGTCATCCTTAGGTTCATT TGGGTTCACATCACTTGTTCAGTTAAATCACCATGTAGGAATGCAGTGTTTATATCAAGTTGTTGTAGGAACCAATTATTGATGGCAGCAAGAGATAAGA GCACTCTAATAGTTGTCATTTTCACTACAGGACTAAAGGTTTCTAAGTAATCTAGCCCTTCAGTTTGGTTGTAGCCTTTGGCCACTAATCTTGCCGTATA TCTCTCAATTGTACCATCAGGGTTATGTTTAATTTTAAACACCCATTTGCAGCCTATGGCCTTCTTGTCCAATGGCAGTTTGGTTAGAGTCCATGTGTTG TTCTTGATGAGAGCAGACAACTCTGTTGCAATTGCATCTTTCCAATGAGTCAATTTGATGGCTTCTGTGTAACTAGATGGTGTGTTATAGGTAGAGATAT TGGAAGAGAAGTGCTTGAATTCAGGGGACAAATTATCATAGGACAGTGTATTACTGATGGGATGTTTGGCTCTAGTTGGAGAACAGGTTGTGTCTGAGAC AAGGCTGCAATGATAATCATTTAACTATGAAGGAGGTCTTTTGGTTCTTTGAGATTATCTCAAAGGTATTGCATTAGTATGCTCATCACTTGCAGGCTGC TCAGGACTTAGGGCAGGTGCTTGAAAGGAGCAAGGTGTAGGCACATCATAAGAAAAAACATCAAACTGAGTAACATGCATAATAGGAGCTTCATTGTTCT CATGACCTGCATTGTCAATGTTAGTATGTTGAAAAGGAAATATGTGTTCAAAGAATCTCACATTCCTTGAGAGAAAGATTTCATTGGTGCTAAAATCAAG AAGGACATAGCCTTTTGTGCCTTGTTTGAATCCCAAGAAAACACATTTTCTGGATCTTGGATCCAATTTGGTTCTATGAGAAACCAAAGTTGAAGCAAAG CACAAGCTACCAAACACCCTTAAAGAGCTTATATCAGGCAAGTTATTAAACACTAACTCATAGGGTGATTTATTTTGAAGAAAAGAACTAGGTTGCCTAT TGATTAAGTGTATGGCATGAGAAACAACATAGTTCCAAAAACATTTAGGAATGCTGGATTCAAAAATCAAGGCCCTAGCTATAGCAAGAATGTGTTGATG TTTTCTTTCCACAACACCATTTTGTTGTGGAGTTTCAACACAAGATCTTTGATGATTAATGCCCTTAGAAGCATAGTAATCTGGAATGATAAACTCCTTT CCATTATCACTTCTAATAGTCTTAATTGTGTGCTGATGTTGTGTTTCAATGTAGGTAACAAAATGCTTAATGAGTTGACTAGTTTCAGATTTATGTTTCA TAAAGAAAACCCATGTGAATCTACTCATGTCATCAACAACAGTAAGAAAAAATTTGTGACCAAAAGTAGATGGTGTGGAAATAGGTCCCCAAATGTCCAT GTGCAGCATGTCAAAGATGTGCAAGGCAGTGGAGTTGCTAAGAGGATAAGGCAATCTCTTCTGCTTGGCAAGTTGACATGCCTCACAAGGGTTAATATCT TTCTTGTATTTCATAAAGGGAAATTTATGTTGCATAGCCATCATTTTCTTATGAGACATGTGTCCTAGCCTAGAATGCCAAAAATTACAATTTCAAAGAT TGTTACAATTGTTAACAGCATATGGTCTAGAGTAATTAATTTCAGAATCCTTCAAGATATACAATCCTTTTCTGTGTTCAGCTGCACCAATCATCCTCAA GGAGAGTGAATCCTGAATTTGACAATGGTTGGTAACAAATGTCAGGGTGCAGCCTAAGGAGTTGGTGAGTCTTGAAATGGATATGAGGTTAAAATTAAAC ATAGGTACAAAAAGAACATTGTCAAGATAGAGGGAATCAGAAAATACAACTGTCCCTGCATAATTGGTGATGACTTTGCTTCCATCAGGCAGAGAGATGG ATAAAGGTTTGATCCTTTTGTAGTTTTGATAAGAAGATAGGGAATTGCAGACATGGTCTGTTGCTCCACTATCAAGTATCCACCAAGTGGAATTGCCTTG TTTTGGTAGAAAACCAGTAAAATTACCTGATTGGTTTTGTTCATGAGCTACATGCACAGAGTTGAGGCTGGATGAAGTTTGAGCAGAGCTGCTATTCTGA CTTATAGATTGCTGAATGAGGGACTTCAGGGCTTGCTGTTGTGCATCTGTGAAGGGAAGTTCAATTCCTTGCTTGACCTCATCAGGTGCAGAACCAAGCA ATCCAGATTCATCATGACCCTGATCCATATCTTCCTCTGCAATATAGTTGTTGACAGTTCTAGCATTCCCTTGGTAACCTGGTGGAAAACCACGCTTCTT GTAGCATGTGTCAATTGTGTGTCCAACTCTGTGACAAAAGGTGCAGATCTTTTGGTTTCTACCTTTTCCCTGAAAGATGGTCTTTGTTGGTGGAGCATAC TTGCTGCTACTGGAATTTTTTAGGATGATATTTCTTGCCTTCTGTCTTGGTTCATTGGCATTGCTTGAAACATGATAAAATTAGAAGATCGTAAAATGTA TAAATTGATAGTGTAAAGATTTATAAACACGCACTTTATCATTCACCATACAATGGATTACCTTTTCTAAAAGGTCAATAATAATAAAATCAATGATGAT AATGCAATGACAGTGTATAAAACTCATACATTGTCGGTGCATACATCTTTATCTCAAATTAGAAATGCTTAACAAATAGTTAGATCATAACATAATGTTA TTAAAACCGTATCGATTATCAAACCGGTCAGAGTACTGGTATAGTGGTTACTGGTTCAACCAGTGATACAATAATTAAACCGTATGCCGATTAAACTGGA TATATTTGCTTATATTTTTATATATATGTAAACCTATAACAAAATTTTTCAAATAGATAGATATTCAACTTTATAATTC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_76626; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_210439
| Blastp | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 35.77% of identity |
|---|---|
| Blastx | Abscisic acid receptor PYR1 from Arabidopsis with 71.82% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019434370.1) |
| Pfam | Reverse transcriptase (RNA-dependent DNA polymerase) (PF07727.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |