| Id Trinity | FTRINITY_DN58388_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_211551 |
| Sequence | GAAAAGACCACAAAATCAATCACTAATGAAATTAACAAGGTTTATATCCAATTAGTTTTGTTTTGAATATCACAGGGGCTTCAGATTTAGCTTCAATTGA CACATTCTATTTAACACCTTACCAAAAATCCCTGCATGAACACATTCCATTTCTGAAATGGTGATAGCGCACACGGTCTCTCATGATAATCTCACGGCTA TAAATTTGAGAAATGAGTTTGAAAGCAGAATGGCAATCCTCACACACCCTTAGATTCTTCACAATGTGCAGAGTTGTTCCTGCTTCTGTACGTATAAGTC CAAATGCAAGTGCAAGTTTTTCACTATGCTGCTTAAGTGCTGTTTCTTTTTCTTCCTCTTCAATATCAAATGATACAATTGATGTATTTGGTGAATACCC TTTAATCTGAAGCTTCTCCATAATGCTTTCTAACATCACATATATCGATTTCATTTCGGGATGTGAACCATCTCCCATTTTAAACTCATGAACTCTGCCA TCTAAATTCATCATACTACTTCCCGGAATAGTCTTGATTCCTCTGTCTTTCATCAACTTCCTAACTCTAGTAACATCATCCCATCTACCTGCTTTTGCAT AAATGTTCGATAGTAACGCGTAACGGCCGCTGTTTCGAGGCTCCATATCAAGCAAAATCCACCCTACCTTTTCTCCTACCTCAACATTTCCATGTACCCT GCATGCATTCAAAAGTGCTCCCCAAATAGCTGCATTAGGCTTTACTGTCATAGACTCTATAAACTTCTCTGCCTCTTTTATAAGCCCAGCTCTTCCAAGA AGGTCAACCACACATCCAAAATGCTCCATCTTAGGTTCAATGCCATAAACTCTATTCATTGAATTCAATAAAGCTACACCACTTTCAACCATGCCTGCAT GTGCACATGCATTTAGAACACTCACAAAGGTAACATCATTTGGCTTCAGCTTTTCCTCTTGCATCTTTTTTAATAGCTCAATTGCTTCTTCAGCTCTTCC ATGAATAGATAGACCTCCTATCATAGCATTCCAAGTGGAGACTTCTTTCACTCTCATCTTCTCGAAAACTTCCCACGACATGTCAAGACGCCCGCATTTA GCATACATATCTATCAAAGCAGTTCCTAACACTGCATTCACTTGAAAAGAATTCCTTTTCACATATGAATGAATCCATCTACCTTGATCTAATGCCCCTA AATTGGCACAAGCAGTTAGAACACTTGGTAATGAGTATGGTTTTGGCTTTACCTTTTCTCTTTGCATTTTATGAAAAACTTCCAAGGCCTCTTTGAAACA CCCTTGTTTGATATAAGCATCAATAATAGCACTCCATGATATTTCATCCCTCTCTTCCATATCATTGAACAAAGTCCTTGCACTCTCAATCATTCCACAC CTAGCCAAGCCACTTATCATTGTATTCCAAGAGCCAACATTCCTATAAGGCATACATCCAAACAAGTCCTTAGCTTCTTCCACCTCTCCACACTTCAAGT ATCCATCAATCATGGCATTCCAACAAACCACATCAGTTTCACCTCTCTCATCAAGCATTCTCCTTGCCTCTTTCACAAGTCCAAATGATGTATACATTTG AATACCAGCACTCTTAATGTGACCATCACTAAGCCCATGTTTCACTACATGGGAGTGAAACTGAATCCCTTCTTTAACAGAACCTGTGATAGCACAAGCC TTGAACAAAGTTGGGTAAGTGAACTTGTTAGGCTTAGAGTTCAAGAGCACCATCTTCTGGTAACATGATATAGCCTCATGTGGCTCTCCATTCTCTAAGC TCCCTTTCAAAACTATATTGCATACAAAAACATTAGGCCTTGGGATTTGATCAAATACTTTGATTGCCAAGGCAAAGTTGTTGAAATGAGGGTTAGCATA GCACTTCACTAAAGTACCAGATACATAATGGTCTTGGAAATGACCAGTTCTCAGTATTATAGAATGAACCTGCCTGAGATGTTGAAGAGAATTGAAGCAT TTCTTGTTAAGGATATCAAGGACTTTTTTCTGTGATAGTTTTGATGTACTCTCTGTTGAGAATTCCAGTGGTTTGAGGCCAGAAGGAAAATTTGTGGCTG TGGTGCTCATGTTTTCAATGTTATCCAGTTTCTTGCAAAAGGGTACGTGTGAAAATCAAGCAACAAGGTTTATAACGTTGAGTTCAGACTGTAGTAGCAT TAACTTTTGTCCATACTCTCCAGTCTCCACTTGCAAAACCAATCTAACAGTGAATTTTATACAACTGCAATGCTATTTTTAAGTGTGATGTTATGTCATC TTAATAATCGTGCTAAAATATTCTTAATCATAACAAAGTAATGTTAGTAATGTTAACCTCCCACTCACATTAAATAAACATATTTAATAATAAATATGTT TCAAATAAATACTTTATATTAATTCTAATAAACACATTCTCACTGAACAACCCATTTTTATGACTTTATCTAGAATAATTTTTTTCTTCTCTATTACTCT GGGTGAAAATTTAATTTTTTATTTACTTTCAATTTTGAGATATTGTAAATAAAGAAATAAATTGAGAAAGAATATTATGGGATGCCATTGTCTTACCATT GTGCATTTACTTGTAACAAATCCCCACTAGTGATATTTCGTCCCTAAATAGTTGTGTATTATGTCTTTAACAGATAAAAAAAATTCAATTAATATAAAAA AATTATTTTATATTTCTAATAAAATTAGACTGGAAATTGGTATGGAAGATCTCTCTCGTCTGAGTTAAGCATTGGACAGCACCAGTGCCACGTGGCTGAC CAAGATGACTAGGACTCTAATCCAACTCCTAAGGTTTGTTTCACCAAAGGAACACGAAAAAAATGGCCACACAAACAACACTAGTTGCACTTTCCGGCCG CATGCCAAACACCACAACCCAGGAGGCTAGAGATTAGAGTGCGGCGTCCACACCTCTTCCACCACCCCTAACAACATTAAAGATAACCTCTTTGCAAATA AATGCAAACACCCACTAACTCATTTTCTTCGATACTATAATCATACACAAAAGATTTCATATTTAGTTCAGTATATTGAAAAAAATAGTGTAACTGTGTT TTAAGGATGTAGTTAACCCCAAAAGGAAGGGCATTGAAAGAAGAGGGTAAGAGAGGAAGAAAAGAAAAAAGCGTTAGACTGCATGAGTTGGGAAAAACCT AGTTGGTTTTTCTTCAAGTTTATGAAGTTGAAGTTTTTTTAAGCAGCGTCAACTATGGCTATTACTGCTACGGACAACTTCTCTTTTATTCATTTTCGCC AATTTTCACAACCTTCATTATCATCATCCCCTTCTTATCGAATACGACACCGTTTCCCTTATAGCCGATTGTTGAACAAGCTTAATTACTCGTGTGCTTC TCACAGATTTTCCTGTCTTAGTTCTAGATGTTCAATAACAAATACTGATATACATCTGGATCATATCACAACGGATGACACTGAAGGAGCGTCTTCAGCT GTTGAACCTGAATGTCTGGTGCCAATAGTTAAACTCAATTCTGATATTCTCGAGACTGTATCTTCGAACGTACTTAATGAAGCCACATTTGTAGATACTC TCTTGACAGCATTACCTGTAGGTTATTTTCCTGCTTTAGGGCGTCAATAAGAATAACCTCACTATTTCTCATTTTTCATGGTGTGTTCCACAGATTTTGA CTGCTGAAGAGCAACATGCCCTAGCAGCTACACCAGCACACCCAGCTGGGTTACATGGTGGGATGATTCTCAGTCTTGCTAACTCCAACTATAACATGGT CGTTTATGAGAATGTTGTTATAGTTCCTGTTACTGAGATTTATGTAGGATTACTTTAACTGGAGTTTCCATTTGGGATAAATTGAACTGATAACAGATTA AATGCACTTCACTTTTATTTCGGCATCTTGATACTATGTAGGAAAATAGACTGAGATCTTCATGCTTTTTGGCAATTAGCTCTATTTACTTGCAGATTAA GAACTACCATAAATCAAAATCCCCAAATTTACTCCCTTGGATCTAAAAGCATTAAAGAGCCCGTCTATTGCACCAGATGAAATCAATTACTCTTGGCGTG GCCAGTCTTTTATTTCACACCTATGTTTATTCCTGCAAATTTATCTTAGGGTAGCTTGCCGAGACACTTTTCTTAAATCTCTAGAGAGATCCCATTAGCA TGATGTGCTATCTTCTTTAAGTTGTGTTGAATCTCGCATAGCAATCTTATTGTGTGTCATTTGTCTAAATAATTGTTTTTTATGGCAGTTGATTCTTGTC CAGTGAATCTATCTGATGATCTTGTTTTCTGTCTTTTGTTGTCTACATTAATCGATGACTGTGAAGTTGAATCATCTAAGCAGCTTTTAACTTGAAGGTT ATATGTTTTCAGCTTTCTATGCTAGTTGCATAGCTGCAAATATGGTGGAGCAGCTTTGGAATTTTGCTTGGCCTTCTGCCATTGCCTTGATTCATCCAAG TCTTTTGCCTGTTGCTGTGATAGGTTTCTTCACTAAAGTGGCTATAATTATTGGAGCTCCCTTGATTGGCAAAGTTATGGACCATGCTCCGAGACTGTAT GGATATAATTGTTTGACTATCATTCAGGCAAGCTATTTAATATAGCCAATATAAAGTCAAGCAGCATATATGTATATAACTCTTTTTCCTAAAAAGGAAT ACTCTAGCTATTTTCAGGCCACTTCCCAGTTGCTATCTGCTGCAATGATTATTCATGCCTATTCGGTGCCTCCTACTTCAGTTTCAACCCTGCTTCTACG TCCATGGTTTGCCATATTGGTTTCAGCTGGATCTGTTGAGAGGCTATGTGGTGTAGCTTTGGGGGTTGCAAATGAGCGTGACTGGGTTGTATTGCTAGCA GGAGTGAATAGGCCAGTTGCACTTGCACAGGCAAATGCTTTTCTTAACCGAATTGATCTCATGTCCGAGATAGTGGGGACATCGCTGTTTGGAGTTCTTC TCTCTAAATTCCATCCTGTAACCTGCTTGAGAGTTGCGGCCGGCTTAATATTGGGGTTACTGCCTGTTACAATTGTTTTCACATTGTTAGCAAATAAGCT TTCTACTGGTGTTCTTGACCGACATAAGCCTCCACAAACCTGTTGCACAACATTCAGTGAAGATTTTGCACCAGACACTGACAGTATAGTGGTTAAAGGT CTGGAAGCCATCAAGCATGGCTGGAAGGAGTATCTAGGCCAGCCTGTTCTCCCTGCTAGTCTTGCCTGTGTTCTCCTCTACTTCAATATTGTCCTTGCAC CTGGAAATTTGATGACAGCATTTTTAACACAGCGAGGCTTAAGTCCATCTATCGTTGGAGGGTTCAGCACAATGTGTGCTTTTATGGGTGTTGCAGCAAC ATTTGTGTCTTCAACTCTGGTCAAGCAATTTGGCATTTTAAAGGCCGGGGCTGTTGGCTTAGTTTTTCAAGCTTTACTTCTCAGCATGGCTGTTGCTGTA TATTGGTGTGGATCAATTTTTCATCAGAACCCACTTCTAGTTTTCTTGTCTTTGATTATTTTATCACGGTTAGGACACATGTCATACCATGTCGTAGGGG CACAGATTATCCAAACAGGAATACCATCATCGAAAGCAAATATCATCGGGACAACAGAGGTTGCTGTCGCTAGTTTCGCAGAGTGCATAATGCTGGGTGT TGCAATAATTGCAAATGATCCTTCTCATTTTGGAGTTCTGGCAATATTGTCTCTTCTATCAGTGGTTGGTGCAGCATGGATGTTCTGTAGATGGTTGTTG AATCCAACAGATGAACAAAAAGTCCTTTTTGCTTATGATCCTCAGTTTTAATTTTCATTTGTTCCATGTAGCTGCCTTTGTGCAAAGGCTTTTTGATGTG AACAAGAACCAAAAATACATTATACTATCAACATTGTGGATGATTATTCACTTAAATACAAGAGCCAGATGCTTTTTCTTCTCAACTACTCATCCTCATT GATACTCATTGTATGGACAAATAGATAGCTTTACTTGTAATTCTGTAAATGTTAATATTCCTTCATGTTTTGTCAGTGTACATGACAAAGTGTATTATTA GCTAATAGCTAGAGATGCCTAGGACCAATGAATACATATTTTATCAGTGATTACTATTCACTTTTTTAGTTTTTAGTTTTACTCTCTAGTAGAGGATATA AATTGTAATATTATGCTTTATCCACATTCTTAAGAATAATGATTGGCATATATACACGAATTTTTTTACAGAATAAAGCTTAAAATATCTATCTAAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_76643; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_211551
| Blastp | Pentatricopeptide repeat-containing protein At5g66520 from Arabidopsis with 41.73% of identity |
|---|---|
| Blastx | Solute carrier family 40 member 3, chloroplastic from Arabidopsis with 62.18% of identity |
| Eggnog | Pentatricopeptide repeat-containing protein(ENOG410Z7Z7) |
| Kegg | Link to kegg annotations (AT5G66520) |
| CantataDB | Link to cantataDB annotations (CNT0002180) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019429169.1) |
| Pfam | PPR repeat family (PF13041.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |