Id Trinity | FTRINITY_DN58390_c1_g1_i10 |
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Name Transcript | Ll_transcript_211020 |
Sequence | AAAATGTTTATCGACAAAGTTAGCCCACATACCTGTAAATGTTCATATAGTTCAGACATAATTATCTCTGATACGAGAATACATTCAAAAACAAAAAAAT TGAACAAGCCAAGCTCCAAGTTTCAAGGAAAAACTGAAAAAATAGAAATAGAATTCTAGATGATTCTAAAGCAATAGAAAGAAAGATGAGCATCCAACGG TCCATATTGAACAGAAGCTTCAAGATGAAATCTCTCATCTATAATAACACTACTCTCTTATCCAAAACCCTTAAACCCTAACCACTCCAATTTCAATCTC AACCTCAATTTTGAAAATCCATGGCATCCTTCACTTCAATGTCTTCCGCCGGTTCTCTCGCCGCGCCACCGCACAATCTCTCCTCCTCCGCCTCCATTTC TGCATTCCCTTTCGCCGCCGGAAGGAGACAGAACAGCAACACCGTCGTTCTCGTAAGGAAAAACCGTAATACCAGAGTTTCCGCCATGGCTAAGGAGTTG CATTTCAATAAGGATGGCTCAGCTATCAAGAAGCTCCAGACTGGTGTGAACAAGCTTGCGGATCTTGTTGGTGTTACTCTTGGACCTAAAGGAAGGAATG TTGTTCTTGAAAGCAAGTATGGTTCCCCTAAGATTGTCAATGATGGTGTTACTGTTGCCAAAGAGGTTGAGTTGGAGGACCCAGTTGAGAACATTGGAGC TAAGTTAGTGAGACAAGCCGCTGCCAAGACAAATGACTTGGCTGGTGATGGAACCACTACTTCTGTTGTTCTTGCTCAGGGTCTCATTGCAGAAGGTGTT AAGGTTGTTGCTGCTGGTGCTAACCCTGTGCTCATCACTCGTGGCATTGAGAAGACAGCGAAAGCTCTTGTAGCCGAGCTTAAGAAGATATCAAAGGAGG TTGAAGATAGTGAGCTGGCAGATGTTGCTGCAGTCAGTGCAGGGAACAATTATGAAGTAGGAAATATGATAGCTGAAGCTTTGAGTAAAGTTGGTAGAAA GGGTGTTGTGACCCTGGAGGAGGGAAAGAGTGCAGAAAACAGCTTGTATGTTGTTGAGGGGATGCAATTTGACCGTGGTTATATTTCCCCATACTTTGTT ACTGACAGTGAGAAAATGGCTGTTGAGTTTGACAATTGCAAGTTGCTGTTAGTTGATAAAAAGATAACCAATGCAAGGGATCTTATTAACATACTAGAAG ATGCAATTAGAAATGGATTCCCTATTTTGATTATTGCCGAGGATATTGAGCAAGAAGCTTTAGCTACCCTTGTGGTGAACAAACTTAGAGGATCATTGAA GATTGCTGCACTTAAGGCCCCTGGATTTGGAGAACGCAAGAGCCAGTACCTTGATGATATTGCTATCTTGACAGGAGGAACCGTAATCAGAGAAGAGGTT GGCCTTACTTTAGACAAAGCGGGGAGTGAGGTTCTGGGCCATGCCTCCAAGGTGGTGCTCACGAAGGATACAACCACAATTGTTGGTGATGGAAGTACCC AAGATGTAGTCAACAAGAGAGTTTCACAAATTAAAAACCAAATTGAGGCTGCTGAACAAGATTATGAAAAGGAGAAGCTCAATGAAAGAATTGCAAAATT GTCTGGTGGTGTGGCTGTGATCCAGGTTGGAGCTCAAACTGAGACAGAGCTCAAAGAAAAGAAGTTGAGAGTTGAAGATGCTCTTAATGCAACAAAGGTG GGAGTTTCTTGTCCAAAACATTCTGTAATCTTTGTAGGCTGTTTCGGCGAGTTAATTTTTTTTGGTTTTCAGGCGGCTGTTGAGGAGGGTATTGTAGTTG GTGGTGGGTGCACTTTGCTGAGACTTGCATCGAAGGTGGATGCTATCAAGGATACGCTTGATAACGATGAGGAAAAAGTTGGAGCTGATATTGTGAAAAG AGCTCTTAGTTACCCTCTGAAATTAATTGCCAAAAATGCCGGTGTAAATGGCAGTGTCGTCAGTGAGAAGGTTCTGTCCAGCGACAATCCTAATTATGGC TACAATGCTGCCACTGGTAAATATGAAGATTTAATCGCTGCTGGGATTATTGATCCCACAAAGGTGGTCAGATGTTGCCTGGAACATGCAGCCTCAGTGG CTAAAACTTTCTTAATGTCTGACTGTGTTGTTGTTGAGATCAAGGAGCCTGAGCCTGCAGTTGCTGGCAACCCAATGGATAATTCAGGTATGTAGTTTAA ATGAATCTTATAAGGTTGTTTTCTAGGTATCATGTTGATATTTGTTCACACTAGAGTGTGTGTCTGTGATATTTTAAAGATAAAAATGTATACCGTAACA GTGTACAATAGTTTTATAACTGTTACTATATCATGCACCTTACATATTTTTTCTTCTAAAAAAAGTAATACAAATGGATGGTAAATGATGTATTGACGTG AATGTAAAATGATGTATTTACTGTATATAAATCTTTTATATATAAATATTACACTTTCTAGTCAGATGCCACTATTATGGATTTATGATATCAGGAATTA TGTAAAATTTTCAATTATCCCTTCCAAATAGGAATCTTGAATTGAACGTTTATAACAAGATTATAGTTAAGAGAAAAGATAAAAAGAATGTATTCACTAA AAGTATGAGTTGTTATTGATTACTTATCATTTATATTTAATCATTATTCTTGAACTATGAATAATATAGTGATTGTGGATAAATCTTTATGGTGACTACT CTTTAGTTACGATGTTTAAACATACTGATGTAACAAAATAGGTATATTGACTCTGCATTTCTTTCTTTACCTTTTCGTAGGATATGGTATCTAGAGCAAT GACAGCTTCAATGGGAGCAGTAATTTTTCCTTTTAGATGAAATACTCAATTCGGCACTTATTTGTAGCACCAAGTCCAATTGTTCTATGGATACATGCGT GAATGAGAGAGTGACGTTGTTTTATTTAAGTTAATAATTCATTTTTTTGCTAATAGCTTCCAATTTAATTATAATATAGTAGTGGTAGTAGTACTTTTTT GGAAGGAATAATGATAACCTAGCATTTTGTACCCTAAAAAGTAAAAAACATAACCGGCTTTTTATGATAGTTTAATTATAATCAAATACATTTTCTAAAC CAATGTAAAATGTTATTTCAAATGCTACACAACAATTTTAGTATGAGGTCATTTCTCATCCTTTCTTTGGGAAACTAGATCTGTTTATTCTATATTTTAG TCATTAATTATAGGGAAATTTTATAGTGTAGATATATTTATGAATTTAAAC BLAST |
Tissue | flowers |
Gene name | LI_gene_76668; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_211020
Blastp | RuBisCO large subunit-binding protein subunit beta, chloroplastic from Pisum with 89.14% of identity |
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Blastx | RuBisCO large subunit-binding protein subunit beta, chloroplastic from Pisum with 88.17% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019425621.1) |
Pfam | TCP-1/cpn60 chaperonin family (PF00118.23) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |