| Id Trinity | FTRINITY_DN58390_c1_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_211009 |
| Sequence | AAAATGTTTATCGACAAAGTTAGCCCACATACCTGTAAATGTTCATATAGTTCAGACATAATTATCTCTGATACGAGAATACATTCAAAAACAAAAAAAT TGAACAAGCCAAGCTCCAAGTTTCAAGGAAAAACTGAAAAAATAGAAATAGAATTCTAGATGATTCTAAAGCAATAGAAAGAAAGATGAGCATCCAACGG TCCATATTGAACAGAAGCTTCAAGATGAAATCTCTCATCTATAATAACACTACTCTCTTATCCAAAACCCTTAAACCCTAACCACTCCAATTTCAATCTC AACCTCAATTTTGAAAATCCATGGCATCCTTCACTTCAATGTCTTCCGCCGGTTCTCTCGCCGCGCCACCGCACAATCTCTCCTCCTCCGCCTCCATTTC TGCATTCCCTTTCGCCGCCGGAAGGAGACAGAACAGCAACACCGTCGTTCTCGTAAGGAAAAACCGTAATACCAGAGTTTCCGCCATGGCTAAGGAGTTG CATTTCAATAAGGATGGCTCAGCTATCAAGAAGCTCCAGACTGGTGTGAACAAGCTTGCGGATCTTGTTGGTGTTACTCTTGGACCTAAAGGAAGGAATG TTGTTCTTGAAAGCAAGTATGGTTCCCCTAAGATTGTCAATGATGGTGTTACTGTTGCCAAAGAGGTTGAGTTGGAGGACCCAGTTGAGAACATTGGAGC TAAGTTAGTGAGACAAGCCGCTGCCAAGACAAATGACTTGGCTGGTGATGGAACCACTACTTCTGTTGTTCTTGCTCAGGGTCTCATTGCAGAAGGTGTT AAGGTTGTTGCTGCTGGTGCTAACCCTGTGCTCATCACTCGTGGCATTGAGAAGACAGCGAAAGCTCTTGTAGCCGAGCTTAAGAAGATATCAAAGGAGG TTGAAGATAGTGAGCTGGCAGATGTTGCTGCAGTCAGTGCAGGGAACAATTATGAAGTAGGAAATATGATAGCTGAAGCTTTGAGTAAAGTTGGTAGAAA GGGTGTTGTGACCCTGGAGGAGGGAAAGAGTGCAGAAAACAGCTTGTATGTTGTTGAGGGGATGCAATTTGACCGTGGTTATATTTCCCCATACTTTGTT ACTGACAGTGAGAAAATGGCTGTTGAGTTTGACAATTGCAAGGTGTGACATTTGTTTTTTCTTTAACTGTTTATTTTTAACATTCTTCATATTCTTTTGT AATTTTATTTGGTGTGTATATTGTGCAGTTGCTGTTAGTTGATAAAAAGATAACCAATGCAAGGGATCTTATTAACATACTAGAAGATGCAATTAGAAAT GGATTCCCTATTTTGATTATTGCCGAGGATATTGAGCAAGAAGCTTTAGCTACCCTTGTGGTGAACAAACTTAGAGGATCATTGAAGATTGCTGCACTTA AGGCCCCTGGATTTGGAGAACGCAAGAGCCAGTACCTTGATGATATTGCTATCTTGACAGGAGGAACCGTAATCAGAGAAGAGGTTGGCCTTACTTTAGA CAAAGCGGGGAGTGAGGTTCTGGGCCATGCCTCCAAGGTGGTGCTCACGAAGGATACAACCACAATTGTTGGTGATGGAAGTACCCAAGATGTAGTCAAC AAGAGAGTTTCACAAATTAAAAACCAAATTGAGGCTGCTGAACAAGATTATGAAAAGGAGAAGCTCAATGAAAGAATTGCAAAATTGTCTGGTGGTGTGG CTGTGATCCAGGTTGGAGCTCAAACTGAGACAGAGCTCAAAGAAAAGAAGTTGAGAGTTGAAGATGCTCTTAATGCAACAAAGGCGGCTGTTGAGGAGGG TATTGTAGTTGGTGGTGGGTGCACTTTGCTGAGACTTGCATCGAAGGTGGATGCTATCAAGGATACGCTTGATAACGATGAGGAAAAAGTTGGAGCTGAT ATTGTGAAAAGAGCTCTTAGTTACCCTCTGAAATTAATTGCCAAAAATGCCGGTGTAAATGGCAGTGTCGTCAGTGAGAAGGTTCTGTCCAGCGACAATC CTAATTATGGCTACAATGCTGCCACTGGTAAATATGAAGATTTAATCGCTGCTGGGATTATTGATCCCACAAAGGTGGTCAGATGTTGCCTGGAACATGC AGCCTCAGTGGCTAAAACTTTCTTAATGTCTGACTGTGTTGTTGTTGAGATCAAGGAGCCTGAGCCTGCAGTTGCTGGCAACCCAATGGATAATTCAGGT ATGTAGTTTAAATGAATCTTATAAGGTTGTTTTCTAGGTATCATGTTGATATTTGTTCACACTAGAGTGTGTGTCTGTGATATTTTAAAGATAAAAATGT ATACCGTAACAGTGTACAATAGTTTTATAACTGTTACTATATCATGCACCTTACATATTTTTTCTTCTAAAAAAAGTAATACAAATGGATGGTAAATGAT GTATTGACGTGAATGTAAAATGATGTATTTACTGTATATAAATCTTTTATATATAAATATTACACTTTCTAGTCAGATGCCACTATTATGGATTTATGAT ATCAGGAATTATGTAAAATTTTCAATTATCCCTTCCAAATAGGAATCTTGAATTGAACGTTTATAACAAGATTATAGTTAAGAGAAAAGATAAAAAGAAT GTATTCACTAAAAGTATGAGTTGTTATTGATTACTTATCATTTATATTTAATCATTATTCTTGAACTATGAATAATATAGTGATTGTGGATAAATCTTTA TGGTGACTACTCTTTAGTTACGATGTTTAAACATACTGATGTAACAAAATAGGTATATTGACTCTGCATTTCTTTCTTTACCTTTTCGTAGGATATGGTA TCTAGAGCAATGACAGCTTCAATGGGAGCAGTAATTTTTCCTTTTAGATGAAATACTCAATTCGGCACTTATTTGTAGCACCAAGTCCAATTGTTCTATG GATACATGCGTGAATGAGAGAGTGACGTTGTTTTATTTAAGTTAATAATTCATTTTTTTGCTAATAGCTTCCAATTTAATTATAATATAGTAGTGGTAGT AGTACTTTTTTGGAAGGAATAATGATAACCTAGCATTTTGTACCCTAAAAAGTAAAAAACATAACCGGCTTTTTATGATAGTTTAATTATAATCAAATAC ATTTTCTAAACCAATGTAAAATGTTATTTCAAATGCTACACAACAATTTTAGTATGAGGTCATTTCTCATCCTTTCTTTGGGAAACTAGATCTGTTTATT CTATATTTTAGTCATTAATTATAGGGAAATTTTATAGTGTAGATATATTTATGAATTTAAAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_76668; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_211009
| Blastp | RuBisCO large subunit-binding protein subunit beta, chloroplastic from Pisum with 90.33% of identity |
|---|---|
| Blastx | Chaperonin 60 subunit beta 2, chloroplastic from Arabidopsis with 89.33% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443787.1) |
| Pfam | TCP-1/cpn60 chaperonin family (PF00118.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |