| Id Trinity | FTRINITY_DN58392_c0_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_210527 |
| Sequence | CACTTGCATTAAGCTTTCTCTCAAAACTCTTTGTCTCTCTTTCTTAGCATTCATCTCAGTTCTTCAGAAGGGAGGCATAAAACGTGCTTCCTAGGTGGTC ATATATACACATCTCATCTTATAAAAAGAGAGGGTGGTGTGGTGTTTGAAGAGAAAGAGGAGGATTAGAATACAAAGAAGAAGCGTGGTAGTGCACAAAA AAAGAGTTCTTCAGTCTCAAAGGGGGTAAAGGGGGGAGGGTTTTATCCAAGTGATGCGATCAGGAGGCTGTGCATTGCAGCAGACCCTCACAGCTGAGGC TGCTTCAGTCTTGAAGCACTCTCTGGGTTTGGCTCGTAGGAGGGGCCATGCACAAGTCACACCTTTGCATGTAGCAGCCACATTGCTAAGCCTAAGAGCA AGTTCCTTCAGAAGGGGTTGTCTCAAATCTCAGCCTCACCAAACTTCACACCCTCTTCAATGCAGAGCCCTTGAGCTTTGTTTCAATGTTGCACTCAACA GGCTTCCAACAACACCAGCTCCTTTGATCCACACTTCTCATCAGCCTTCTTTTTCCAATGCTCTCATTGCTGCACTCAAGAGAGCACAGGCTCACCAGAG AAGGGGTTCCTTTGAGCAACAGCAACAGCAGCAACTTCTCACTGTAAGGGTTGAGCTTGAACAACTCATCATATCCATTCTTGATGACCCTAGTGTTAGC AGGGTTATGAGAGAAGCTGGATTCTCTAGCACTGCTGTTAAGAACAACATAGAGGACTCTTCTTCATCACCTTCTTCTGTTTTCCAGTGTTATAACACTT CTGGTGGTGTGTTTTCTTCTCCTTGTTCACCTTCTGCTACTGAGACCAACCCTTTCAGTTTCAGGCAGAATCATTTCTTGGCTGCTTATACTTCTGAGTT CAACAACCAGGTTCTCTTTACTCCACCAAAGAAAGCACCAGTGTATCCTTATCCAGTAACTAGTGCAGCAGCATCTTCTACTAAAGATGATATTAAGGTG GTTTTTGATATCCTGTTGAAGAAGAAAAGGAACACTGTGATAGTTGGTGACTCAGTGTTATTGACTGAAGGCCTTGTGGGAGAGGTCATGAGAAGGTTTG AGAGATCAGAGGTGCCTGATGGGTTAAAGTTAACAAATTTTATCAAGTTTCAGTTTGCACCAGTTTCTTTGAGGTATATGAAAAGAGATGAAGTTGAAAT GAAGGTTTTGGAGCTGAAAAGGAAGGTGGATTCAGTTGCATCAGGAGGAGGTGGTGGTGCAATATTTTACATTGGAGACTTGAAATGGATAGTGGAAGGG TCCATGGATGGTAAAGTTTGTGGTTATAACCCAGTTGATCATTTGGTTTCAGAAATTGGAAACTTATTCTGTGGAACTTCAAACACTAATGTGTGGCTAA TGGCTACTGCAAGTTACCAAACATACATGAGGTGTCAAATGAAGCAACCCCCTCTTGAGTCTCAATGGACTCTTCAGGCTGTTCCTGTTCCATCTGGTGG ACTTGCCTTGAGTCTCCATGCTTCTAGTGTCCTTGATTCAAAGATGAGCATCTCCAAGAACCCATCTCATGAGCTTGAAACAAAACTCTTTAGTGACAAG GAGCAGCGGGATAACTGTTGTGAAGAATGTACCTCCAATTATGAAAAGGAAGTTCAATTTATCAAAACAGACCAGAAGAAAATGCTGCCTTTCTGGCTTC AGTCTCATAACATTGAAGCTAATCAGAAGGATGAATTAACCAAGCTGAAAACAAAATGGAATAGATTGTGCCACTGTCTCCACCAAAGCCAACAGAATCA GAACAAATCCAGCAGCAATAACAATTGGAATGGAAAGATCTACCCTTATAACTCATCAAGTTCTATATCCTTTGCCAACAATACTTATAGCCCCAATCTT GTACCTTCTTTCCAGCGTCAACAATCGTGCATTGAGTTCAATTTCAGTGACAAAAACCAAGCAACAGAGCCACTCTTGGATTCTCTTGAAGGCATGTCAG AAGGAGAATGTGGCATGGCATTCTGAGACTATTCCTTCAGTAGCAGAGGCCTTGGTTGATTCGAAATCAGCAAAGCAAAATAACATTACTTGGTTATTGA TGCAAGGCAATGACTCTATTGGAAAAAGAAGGATAGCAGTTGCAGTTGCAGAATCAGTTTTCGGCACAGCTGATAAGCTCCTTCACTTGGACATGCTGAA GATAGAGACTTCAATAGCTCCATTTTCGGAAATTCTGACAGGAGCATTGAAAACTCATCAACAGCTTGTGGTGTTAATAGAAAATCTTAATTTTGCTGAT GCCCACTTCATGAAACTACTTGCTTATGGATTTGAAACAGGAAAGTTTGGAAATTTAACTAGGAACTCAGAAAAGTTAGGCCAATTGATATTCATATTAT CAAATGGTGATTCGACAAGCAATGAAGATAAGAATCAGGACTCTGTGATCAAGTTGCTGTTGCAGGTAAGTGAAACCAAGCCTAACTTAGAGACACCTTG TTTAGGCCTTAAGCGAAGGGCCGAACTGGACTTGTTCTCGAAGATCAAGACTCCGAGAATTGAACAAAAGGAAGAAATATTTCTGGTTTCTGAACAAGGG AGCAGAAAGGACTTTTCAAGACAGTCAAGCTTTAACACCCTTGATCTGAATTTGAAGGCAGGTGAAGAGGATGACAAAACAGGCGAAAACAGCCCAATTT CAAGTGATTTAACTAGAGAAACTATACTTGATTCACTTAGCCTAAACAGGTTTCTTGACTCAATTGAGAACAGGTTTGAGTTGAACACAAGTCCAGCAAG GGAAAAAGAGATAGCAGAGCTGTTCTTATCCAAAATCAAGGGGTCTTTTGAAGAGGTTTATGGGAAGCAACATGTGGTAAATTGTAGTGTAGATGAGAGG GTGATTAAGGAAATATATGTAGGGTGTGGTTCTTTTACTAACAGCTTATTTAAGAAATGGGCCAGAGACATTTTTGAAAACAGCTTGCAGACAGTTAAAT TTGGAGGGAAAGAGGGTATAGTTGTTAGGCTTACGTGGGGTGGTAAAGAGGATACAAAATTGGATAATGGGTTCATGAATTCAACTCTGCCCAACAACAT CCAAGTTAACTACTTTATGGATTGAGGGTTTTTGGGTATACTGAGGATTTTGGTTATACTGAAGGGTTTCTTGTAAAATTGTGAAAAAGGATGTGATATG AGGGATAGCTTGTGTAATTGTTCATTCTCTTAATAGCATGTGTTTGTTTCCTTCTGTTTTAACCTATGAGTTATCTAAGGAAAAAAGATCTCTGGATCTC AAAAAGâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_76684; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_210527
| Blastp | Protein SMAX1-LIKE 4 from Arabidopsis with 50.63% of identity |
|---|---|
| Blastx | Protein SMAX1-LIKE 5 from Arabidopsis with 43.91% of identity |
| Eggnog | ATP-dependent CLP protease ATP-binding subunit(COG0542) |
| Kegg | Link to kegg annotations (AT4G29920) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019442723.1) |
| Pfam | Clp amino terminal domain, pathogenicity island component (PF02861.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |