Ll_transcript_212087

• Id Trinity: FTRINITY_DN58395_c1_g1_i13
• Name Transcript: Ll_transcript_212087
• Sequence: CGCATACCCAAAATCTTCCATCACATTTTTCTCTCATTCTTGTTCCTCTTCAATATCGAGCAATAACACCATTCATTCACTCACCCAATCTCTCTATTTC TCTCTCAGCATCAATGCCTGGCCAAAAACGCTCTTTCTCTGACTCTCTCAACGATGGAGACACTTCTTCACAGTTCCCCCACCATGTCAAACAGCAACAA CAACACCAGCAACAACCTAAGCAGCACGAAGATGAAGACGAGGGAAACGTTGAGCACGAGGAAGAAGAAGAGCAAGAAGGTGATGCAAAAGAAGAACAAA ATGATGAAGATGAAGAAACAGGTCAACACCAGAACAATAACAACGATGAAAAACCACAGGATTCTGACGAAACTACATCTTCTGGCCCTGAAGATAAATC GGAGTTTGTGTATGTAGAACTTCATGAAGTTCGTAAAGATGTCCAGTGTCCAATTTGCCTTGGCATTATCAAGAAAACAAGAACGGTTATGGAATGCTTG CACCGGTTTTGCAGGGAATGCATTGACAAGTCAATGCGATTAGGGAACAATGAATGTCCTGCTTGCCGTACACATTGTGCCAGTCGTCGTTCTTTGAGAG ATGATCCAAACTACGATGCACTTATTGCTGCTTTATATCCAGATATTGAGAAGTATGAGGAAGAGGAGCTTGAATTTCGTGAAGAGGAGAAGAACCGCAA TAAGCAGCTTTTCTCACAGATTCAAGCTTCGATTGCAAAAGTAGTTCAACGACAATCTGAGGCAATGGGAAAGAGACGTAAAGATACACCAGGTACATCT GTGACAAGATCACAGCGCAATCAGCGAAATATTCATTCTAGGAGACAGAATCAAGTGAATGATACTCAAGGTTCTGAAGATAATGACGAGGACAATGACA ATAATGAAAAGGACTCATCTTCTGCCGATGAGCGTTGTACAGAATCTAGGCAGAGTAAGCGAAAGAGATGGACCAGAGTTCGCCCTTCTCAACCCTCATC ATCGAGGGCAAGCCCTGATGGTGGATGCATAGAAAGTGATATGGACATAAGTAGAGAAAATCAAGGAACTTCAAGGCAGATGACACGACCTCGAAAGCTT ACGTGGGGAAGGGGTGGTTTTAGAAGTCACACACGGTATGGCAGTGGTGGTGGTGGTAGCAATAGAAAAAGTTCCCACCGTGGTCGATTGTCTAAGTTGG TTGATCATCTCCAGAACTTGGATGAAAACACTGATGAGTTCAAAATCCATCTCATGCTTGTTTCTCTGGACAAACAAAGTACACCAATTTTGCAGCAGCC ATACCTTTGCTGTCGACCAACTTTGTCGGTCAAGCACCTTTGTGAATATGTTGCTTGTCAAACCCCTTTGGCGGTCGAAGAAGTTGAGATATTTGCAGTT AAAGGATGCGGCAGTTCGAAGTGCGAGAAGTCAGCTGATCACACTTCGGCCTTGATATGCGATGAGCTAACAACGCTGCATATTGATCCATGCAATGATG AACTGGAAATTCTGCAAGAACATGAATCTCTTGCTGGGATTACATCCAAATGCATATCTAAGATGGAGCATTTGATTCTGGCATACAGGCGCAAGGAGGC ACTATGATCATGCTTTGATGCTCATACTTTTTATATACATAGATACATACAAAGGAACAGTTGGGTGGAATGGTTATTTCTCTAGTTGCATGCTCAAGAA CAAGAAATATATATTTAGAAAATGCTAAATTACATGAACCTCTACAAAGGTTTCACAAGTCTTCCATAAGCTTTAGATTTACTTCATATAATACTAATTA GTTTTGGGTGAGGTTAATGCAATGGTAAGGTTCTACGGTCACGAGTTTAAATCCTGAAAACAGCTTTTCCGCTCGTGGGAGTAAGGCTGTATACATCTAT TCTCTTTAAACTTCATTAAGTGAGCGCCTTGCGCATTGGGCTGCCCTTTTAATACTAGTTACAATTTCAACTTTATTTAGTTTTCATTGTTGCTGAATTA CCAAAGGATGTTTTGAATGTGATGTCAAATCTATCATCAAGATTGCAGTAACTGTAGTAAGTAGACTGCATTGCAGATATAGCAGATTTATAATGTCCAT AAATGGATGTTTTAATCTAGAATTAAGTGTTTTGTTAAATAGACATTAATGAATGTTTTAAGGGTCACTCATGAACATGAAGGTGTCATTCTGAAAGCAC ATTGTTCTTGTGTTTTTTATTCCTTTACCTTTACGTTGACTTCTTAATATTGCTTTGCTTGTAATTAACTTGAAAATTGTGCTTCTAATGAC
• Tissue: flowers
• Gene name: LI_gene_76716;
• Additional information: details;

Expression of Ll_transcript_212087

FPKM

• FPAB: 0
• FPNAB: 0
• LF1: 0
• LF2: 0
• LF3: 0.5
• LF4: 0.6
• UF1: 0.4
• UF2: 0
• UF3: 0.1
• UF4: 0.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_212087

• Blastp: Putative E3 ubiquitin-protein ligase RING1a from Arabidopsis with 49.52% of identity
• Blastx: Putative E3 ubiquitin-protein ligase RING1a from Arabidopsis with 47.99% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (AT5G44280)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019432179.1)
• Pfam: Zinc finger, C3HC4 type (RING finger) (PF13923.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;