Ll_transcript_212100

• Id Trinity: FTRINITY_DN58395_c1_g1_i21
• Name Transcript: Ll_transcript_212100
• Sequence: CTTCATTATTGTTCTTCTCCAACACCAGCACGATTTTCCTTCACTCAACCCTCTTTTCTCTTTCTCTCAGCATCAATGCCTGCCCAAAAGCGCTCCTTCC CTGACTCTCTTAACGATGAGGACACTTCTTCACAGCTCCCTCACCATCACCTCAAGCAGCAGCAACAACAACAACAGCCTAAGCAGCACGAATACGAGGA CGAGGAAAACGATGAGCACGAGGAACAGGAAGATATAGAAGAAGAAGCAGAAGAACAAGGTGATGCAGAAGAAGAACAAGATGAAGATGAAGACGGTGAA GAAGAAGAAGAAGAAGGTCAACACCAGAACGATAATAAGGATGAAAAACCACAAGATTCTGATGAAACCCCTTCTTCTGGCTCTGAAGATAAATCCGAGT TTGTGTATGTAGAACTTCAGGAAGTTCGTAAAGATGTCCAGTGTCCAATTTGCCTTGGTATCATCAAGAAAACAAGAACTGTCATGGAATGCTTGCACCG GTTTTGCAGGGAATGCATTGACAAGTCAATGCGATTAGGGAACAATGAATGTCCTGCTTGCCGTACACATTGTGCCAGTCGTCGTTCTTTGAGAGATGAT CCAAACTACGATGCACTTATTGCTGCTTTATATCCAGATATTGAGAAGTATGAGGAAGAGGAGCTTGAATTTCGTGAAGAGGAGAAGAACCGCAATAAGC AGCTTTTCTCACAGATTCAAGCTTCGATTGCAAAAGTAGTTCAACGACAATCTGAGGCAATGGGAAAGAGACGTAAAGATACACCAGGTACATCTGTGAC AAGATCACAGCGCAATCAGCGAAATATTCATTCTAGGAGACAGAATCAAGTGAATGATACTCAAGGTTCTGAAGATAATGACGAGGACAATGACAATAAT GAAAAGGACTCATCTTCTGCCGATGAGCGTTGTACAGAATCTAGGCAGAGTAAGCGAAAGAGATGGACCAGAGTTCGCCCTTCTCAACCCTCATCATCGA GGGCAAGCCCTGATGGTGGATGCATAGAAAGTGATATGGACATAAGTAGAGAAAATCAAGGAACTTCAAGGCAGATGACACGACCTCGAAAGCTTACGTG GGGAAGGGGTGGTTTTAGAAGTCACACACGGTATGGCAGTGGTGGTGGTGGTAGCAATAGAAAAAGTTCCCACCGTGGTCGATTGTCTAAGTTGGTTGAT CATCTCCAGAACTTGGATGAAAACACTGATGAGTTCAAAATCCATCTCATGCTTGTTTCTCTGGACAAACAAAGTACACCAATTTTGCAGCAGCCATACC TTTGCTGTCGACCAACTTTGTCGGTCAAGCACCTTTGTGAATATGTTGCTTGTCAAACCCCTTTGGCGGTCGAAGAAGTTGAGATATTTGCAGTTAAAGG ATGCGGCAGTTCGAAGTGCGAGAAGTCAGCTGATCACACTTCGGCCTTGATATGCGATGAGCTAACAACGCTGCATATTGATCCATGCAATGATGAACTG GAAATTCTGCAAGAACATGAATCTCTTGCTGGGATTACATCCAAATGCATATCTAAGATGGAGCATTTGATTCTGGCATACAGGCGCAAGGAGGCACTAT GATCATGCTTTGATGCTCATACTTTTTATATACATAGATACATACAAAGGAACAGTTGGGTGGAATGGTTATTTCTCTAGTTGCATGCTCAAGAACAAGA AATATATATTTAGAAAATGCTAAATTACATGAACCTCTACAAAGGTTTCACAAGTCTTCCATAAGCTTTAGATTTACTTCATATAATACTAATTAGTTTT GGGTGAGGTTAATGCAATGGTAAGGTTCTACGGTCACGAGTTTAAATCCTGAAAACAGCTTTTCCGCTCGTGGGAGTAAGGCTGTATACATCTATTCTCT TTAAACTTCATTAAGTGAGCGCCTTGCGCATTGGGCTGCCCTTTTAATACTAGTTACAATTTCAACTTTATTTAGTTTTCATTGTTGCTGAATTACCAAA GGATGTTTTGAATGTGATGTCAAATCTATCATCAAGATTGCAGTAACTGTAGTAAGTAGACTGCATTGCAGATATAGCAGATTTATAATGTCCATAAATG GATGTTTTAATCTAGAATTAAGTGTTTTGTTAAATAGACATTAATGAATGTTTTAAGGGTCACTCATGAACATGAAGGTGTCATTCTGAAAGCACATTGT TCTTGTGTTTTTTATTCCTTTACCTTTACGTTGACTTCTTAATATTGCTTTGCTTGTAATTAACTTGAAAATTGTGCTTCTAATGAC
• Tissue: flowers
• Gene name: LI_gene_76716;
• Additional information: details;

Expression of Ll_transcript_212100

FPKM

• FPAB: 0.9
• FPNAB: 1.7
• LF1: 1.1
• LF2: 1.1
• LF3: 0
• LF4: 0.2
• UF1: 0.2
• UF2: 0.8
• UF3: 0.5
• UF4: 0.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_212100

• Blastp: Putative E3 ubiquitin-protein ligase RING1a from Arabidopsis with 49.76% of identity
• Blastx: Putative E3 ubiquitin-protein ligase RING1a from Arabidopsis with 48.69% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (AT5G44280)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019432179.1)
• Pfam: Zinc finger, C3HC4 type (RING finger) (PF13923.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;