Ll_transcript_212105

• Id Trinity: FTRINITY_DN58395_c1_g1_i24
• Name Transcript: Ll_transcript_212105
• Sequence: GTCCCATACCCAAAATCTCCCATCTCATTTTTCTTCTTCAGTGATTCATTCACTCACCAATCTCTTACTCTCTCAGCATCAATGCCTTCTCAGAAGCGTT CCTTTCCCTTCTCTCTCGACGATGGGGACAGTTTTTCACACCTCTCTAACCATCACCTACAACAACAACAACAACCACAACAACCTAAGCAGCACAAAGA TGAAGACGAGGAACACGAGGAGGTTGATGAGGAGTTAGAAGAAGCAGAAGAACAAGGTGATGCAGAAGAAGAAGAACAAGGTGATGCAGAAGAAGAAGAA GAACAAGATGATGTGGATGAAGAAGAAGAGGAAGAAGATGAAGAAGAAGGTCAACAGCAGAACAATAACAATGATGAAAAACCACAGGATTCTGATGAAA CCCCATCTTCTGACTCTGACGATAAATCTGAGTTTATATATATAGAACTTCAGGATGTTCGCAAAGATGTCCAGTGTCCAATTTGCCTTGGTATCATTAA GAAAACAAGAACTGTTATGGAATGCTTGCACCGGTTTTGCAGAGAATGCATCGACAAGTCAATGCGATTAGGGAACAATGAATGCCCTGCTTGCCGCACA CATTGTGCCAGTCGTCGTTCTTTGAGAGATGATCATAACTATGATGCCCTTATTGCTTCTTTATATCCAGATATTGAGAAGTATGAGGAAGAGGAACTTG AATTTCGTGAAGAGGATAAAAGCCGCAATAAGCAGATTCAAGCCTCAATTGCCAAAGTAGTTCAACGACAATCTGAAACAGCGGGGAAGAGACGCAAAGA TACACCAGGTGCATCTGTGACAAGATCACAGTGCAATCAACGCAATGTTCATTCTAGGAGACAGAGTCAAGTGATTGATACTCAAGAGTCTGAAGATAAT GAGGACGAAAATGACAATAATGAAAAGGACTCATCTTCTGACGATGAGCATTGTACAGAAGCAAGACAGAGAAAGCGAAAGAGACGGACCAGTGCTCGCC CCTCTCAGCCCTCATCATCAAGGGCAAGTCCTGATTATGGATGCATAGAAAGTGATACAGATATAAGTAGAGAAAATCAAGGAACTTCAAGGCAGGTGGC AATACCTCATAAACTTACTTGGGGAAGGGGTGGTTTAAGAAGCCACACACGGTATGGCAGTGGTGGTGGTGGTAGCAATAGAAAAAGTTCCCACCGTGGT CGATTGTCTAAGTTGGTTGATCATCTCCAGAACTTGGATGAAAACACTGATGAGTTCAAAATCCATCTCATGCTTGTTTCTCTGGACAAACAAAGTACAC CAATTTTGCAGCAGCCATACCTTTGCTGTCGACCAACTTTGTCGGTCAAGCACCTTTGTGAATATGTTGCTTGTCAAACCCCTTTGGCGGTCGAAGAAGT TGAGATATTTGCAGTTAAAGGATGCGGCAGTTCGAAGTGCGAGAAGTCAGCTGATCACACTTCGGCCTTGATATGCGATGAGCTAACAACGCTGCATATT GATCCATGCAATGATGAACTGGAAATTCTGCAAGAACATGAATCTCTTGCTGGGATTACATCCAAATGCATATCTAAGATGGAGCATTTGATTCTGGCAT ACAGGCGCAAGGAGGCACTATGATCATGCTTTGATGCTCATACTTTTTATATACATAGATACATACAAAGGAACAGTTGGGTGGAATGGTTATTTCTCTA GTTGCATGCTCAAGAACAAGAAATATATATTTAGAAAATGCTAAATTACATGAACCTCTACAAAGGTTTCACAAGTCTTCCATAAGCTTTAGATTTACTT CATATAATACTAATTAGTTTTGGGTGAGGTTAATGCAATGGTAAGGTTCTACGGTCACGAGTTTAAATCCTGAAAACAGCTTTTCCGCTCGTGGGAGTAA GGCTGTATACATCTATTCTCTTTAAACTTCATTAAGTGAGCGCCTTGCGCATTGGGCTGCCCTTTTAATACTAGTTACAATTTCAACTTTATTTAGTTTT CATTGTTGCTGAATTACCAAAGGATGTTTTGAATGTGATGTCAAATCTATCATCAAGATTGCAGTAACTGTAGTAAGTAGACTGCATTGCAGATATAGCA GATTTATAATGTCCATAAATGGATGTTTTAATCTAGAATTAAGTGTTTTGTTAAATAGACATTAATGAATGTTTTAAGGGTCACTCATGAACATGAAGGT GTCATTCTGAAAGCACATTGTTCTTGTGTTTTTTATTCCTTTACCTTTACGTTGACTTCTTAATATTGCTTTGCTTGTAATTAACTTGAAAATTGTGCTT CTAATGAC
• Tissue: flowers
• Gene name: LI_gene_76716;
• Additional information: details;

Expression of Ll_transcript_212105

FPKM

• FPAB: 0.4
• FPNAB: 1.2
• LF1: 0.8
• LF2: 0.2
• LF3: 0.5
• LF4: 0.3
• UF1: 0.2
• UF2: 0
• UF3: 0.6
• UF4: 0.7

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_212105

• Blastp: Putative E3 ubiquitin-protein ligase RING1a from Arabidopsis with 49.28% of identity
• Blastx: Putative E3 ubiquitin-protein ligase RING1a from Arabidopsis with 73.85% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (AT5G44280)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019433483.1)
• Pfam: Zinc finger, C3HC4 type (RING finger) (PF13923.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;