Ll_transcript_212434

• Id Trinity: FTRINITY_DN58399_c6_g1_i1
• Name Transcript: Ll_transcript_212434
• Sequence: CTTTTTTAATATTACTAAGATATTTGGTGAATTTCTTATTTAATATTTTCATTTATAAAATAATAATAATTAAAAATTGAGCAACTACCACCAAGAAAAA GTTGAGAGAAGTGATTACCAACTACCAACTGATAACTTCTTCACCTTCCCTCCTAACCACTCATTCTTCTTATTATTCCCAATTCCTAGGGTTTCTCTTT GCTCCACCTCTTCCTCTTTCTTTTCAAGGTTTGTTTTCTTCTTCAATTCCTCCTTTTTCTTCAATTAACCCAACTTGGTAACCATATATTAACAAAAAAT AACTTTTTTTGTTCATTTAGTATATTGTTCCCTTTTAGTGCCATTTTGATTTGAGTTTGTCAATTTTGCTTGTAATTCAATTTTTTGGTGCTGGCTTTCA TTTCAAGTTTCAATCTTCAACTGTGAGTTTCTATGTTTGCTACTGCTATCAATCCATCATTATATCACACTTGGAGTCAATTTTAATCAGCTGCAATTTG AATATCCTAAATCATTATTCAATTTTATGATCTTAAACAGACAATGCTTATGTTTTTGAAGTTTTTGTTATCTTAATCTTAAAAAGATTACATCTTCTCT TTTCATACTATGCTTCCGGAAAGAAAGAAGAAAAAAGAGCTTTAACTTGATGTTGAGAGAATCAGAGCACAACAGGCAAAATTTAAAGTTAAATTAGTAT GATTCATGTGAATACCTTTTTGTGACTAAACCACTAAGTGTAACCTTGTTTGAGTTGGTGGAAAATTGGAAATGTAAATCACTTCAGACATGCTTAGTAT GGTAAGGTTGTAAGTGGAATGCAGCTCATTTGAATTCCACACCACTAATTTTGTTCATTACTTTACCATGAAAATGAGTTTCTGTTTCCTTTTTTATCAT TGAAATTTTGCTTTACATCACCAGTTCTTTCACTGATTTTATATGATATAGCATCATATGTTGATGAACATGTGAATCTCCTTCAACCTGGATAAATGGT AGCGCGTAAGGTCTTAAGTTAGTTCTTGATGCACAGTACTCACTCTTACACATCTATTTCCATGATCACTTTTAGCCTATCCACTTCACCATGTCAAGTT TGGAGGAACCACTTGGTCTCGACAAGTTGCCAAGCATGAGTACCATTGATAGGATTCAGAGGTTCTCGTCTGGTGCTTGCTGTTCCAGAGTAGATAACTT GGGCATGGGAAACCGCTGGCTTGAAGGACGGAGTTGCAGCACATCTAACACCTGCAATGAAGATTATGAAGAGTATACAGAAGAGACATTCCCATGGAAA AGACAAACAAGAGACTTGTCTCAAGGAGGTGACTACTTTAATCAAAATACTGCAAACAAAGGGAGGAGCTCGATGAAATTCAGAATGACCGATGATTCAT TCTCCGACTGCCAGTACAGTCCAACGTGCAATAACAATGATATACAAGATTTGACATCTAAGTTTCTGAAAGGTATACCAACATTTGTTAAGATAGTAGA AGTTGGTCCAAGGGATGGATTACAAAATGAGAAGAACATTGTACCTACAGCTGTAAAGATTGAGTTGATTCATAGGCTAGCTTCTTGCGGGTTGTCTGTC ATTGAGGCTACAAGTTTTGTATCTCCCAAATGGGTCCCACAGTTGGGTGATGCAAAGGATGTAATGCAAGCAGTTCATAACTTGGGAGGCATCAGATTTC CAGTTTTGACTCCTAATTTAAAGGGTTTTGAAGCTGCTATGGCAGCTGGTGCTAGAGAGGTAGCTGTTTTTGCATCAGCTTCTGAATCATTTTCAAAATC AAACATTAATTGTAGTGTTGAAGAGAGTCTTTCTCGTTATCGAGCTGTTACTCGTGCTGCTAAAGAACTTTCAATTCCTGTTAGAGGGTATGTATCATGT GTTGTCGGATGCCCGGTGGAAGGACCAATCTCTCCCTCAAAAGTGGCATATGTTGCTAAAGAACTGTACAATATGGGATGTTTTGAAATCTCCCTTGGTG ACACAATTGGAGTTGGCACACCAGGAACTGTAGTTCCTATGCTTGCAGCAGTAATGGCCGTTGTACCAAAAGTGAAGCTTGCCGTCCACTTCCATGACAC TTATGGGCAATCCCTTGCAAATATTCTTGTGTCACTCCAAATGGGGATTAGTATAGTAGATTCCTCCGTTGCGGGTCTTGGGGGGTGTCCATATGCAAAG GGAGCTTCAGGAAATGTGGCTACTGAGGATGTTGTGTGCATGCTGAATGGTCTTGGTGTGAAAACCAACATTGATCTTGGAAAACTCATGTTGGCTGGAG ACTTCATCAGCAACCATCTGGGGCGCCCCTCGGGTTCAAAGACCGCCATTGCCTTGGGCCGAGTCTCATGCTTGAAGCAGTGACAGTTTATGCATACTAG TAGTGGTGGTAGTAGTAAAAGAGGAATAAAATCTTGAGTATGCATTTAATCTGGAAATTGTAACTATTAAGTGAAAGCTATTCATCTGAAGCTTGGCCAT TTGTATTTTTAAGTCCTGTGTTATTCTTGTAATAGCAATCACATCACACGTTTGTGTAATGTTTATGCTACACATGACTCTAATAAATAAATAATTCTTT ATATTTATTGTGTCAGG
• Tissue: flowers
• Gene name: LI_gene_76757;
• Additional information: details;

Expression of Ll_transcript_212434

FPKM

• FPAB: 0.5
• FPNAB: 0.2
• LF1: 0.4
• LF2: 0.4
• LF3: 0.2
• LF4: 0.2
• UF1: 0.2
• UF2: 0.1
• UF3: 0
• UF4: 0.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_212434

• Blastp: Hydroxymethylglutaryl-CoA lyase, mitochondrial from Arabidopsis with 73.54% of identity
• Blastx: Hydroxymethylglutaryl-CoA lyase, mitochondrial from Arabidopsis with 73.1% of identity
• Eggnog: Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) (By similarity)(COG0119)
• Kegg: Link to kegg annotations (AT2G26800)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455920.1)
• Pfam: HMGL-like (PF00682.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;