| Id Trinity | FTRINITY_DN58399_c6_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_212437 |
| Sequence | TCTGCTTCACCAGTTATTTTAATGTTATATAGCATCGTCCGAAGTAAATAGATTTGAAAGGGGCATCAAATTTGTTTTCCAATTTTAACTGATGGTATCT GCTTGTGCTGTGACTACAGAATTAAACTGAGCATAACTTGTCATTAGAATTTATTTTGTGAAAATGAACATGCACATAATACGCGGGTGAAATTATGTTT TTCCGTATTACCTGCTGATAACTGTAACAAGTAAGCTTAGCAAGTTATTTATGCAGAGTACTAACTTCCGCACATTTTTCGTCAGCTCCCTTCGACCCAC CCACTTCACCATGTCTAGTTTGGAGGAGCCACTTGGTCTTGACAAATTGACAAGCATGAGTACTATTGATAGAATTCAAAGGTTCTCATCCGGTGCTTGT CGTCCCAGTGTAGATAATTTAGGCATGGGAAACTGCTGGATTGAAGGGCGAAGTTCCAGCACATCTAACAGCTGCAATGAAAATAATGAAGAGTATACTG TAGAGACATTCCCATGGAAAAGGCAAACAAGAGGCATGTCCCGAGGCGACTCTTTCAGTCAAAAGACGATGACCATCGGAAGGAACTCGATGAAAATTGG AATGACTGATGATCCATTTAGCTCCTCAGATTACCAGTATAGTCCCAAATGCAATAGCAAAGAAATACAGAATATGGCATATAAGTTTACGAAAGGTATA CCGAAGTTTGTAAAGATAGTAGAAGTTGGTCCGAGGGATGGATTGCAAAATGAGAAGAGCATTGTACCGACGTCTGTCAAGATTGAATTGATTCATAGAC TAGCATCTTCTGGGTTATCTGTTATTGAGGCTACTAGTTTTGTATCTCCCAAATGGGTCCCGCAGTTGGCTGATGCAAAGGTTGTAATGAAAGCAGTGCA GCACTTGGACGGAATCAGATTGCCAGTTCTGACTCCTAATTTGAAGGGGTTTGAAGCTGCCGTGGCAGCTGGTGCTAGGGAAGTAGCTGTTTTTGCATCA GCTTCTGAATCGTTTTCAAAATCAAACATTAACTGCAGTATTGATGAGAGTCTTGTCCGCTATCGAGCTGTTACTCGTGCTGCTAATGAGCTCTCAATCC CTGTTCGAGGGTATGCCTTTTGTTTTGTTTTTCGTTATTCTTACCATCCATCAAATACTGTCTGCCTTATTGCCTTGATATATTTATAAATGTGCAGTTA TTCCGGACAGAAACTTCCAATACATTTTACTTTTGAGACTGATATTTTATTAAGCTTTTGCATTTATTGCCTTGAAATTTCTTTGTTTTGAGTAGTACCC GTTTGAATTTGGTGAACAAGTTATCTTATATTGATGAATTTTGTACATGACCTGTTTCATGGCATCTATTTCTGTATTTTCACTGTTTATATTTTGAGAT TTAGCCATAGTAAGTCACTTGTATATCCCTAACTGTAATTGGGACAAGTGTGGACATTGCACAGACCTACTTTACATCGTGCCGAACTTTTAATTTCATT ATTAAGAATGGAGGCAACAAGGATTGAAATCAAGACCTAGGATTTGAATTTTATCTTTTAACAGTTACCACATTAAAGTCCCTATTCCTTACTGGTAGAG ATAGTACTTGTATTCCTATTGCTGATTTTGTATTCAAACATGTGATAGAAACAAGATATATGTTTCAGTGGAGAAAAGTTAAAAAATAATAAGAATTATA CATTTTAACATATACATGTTAAATTGACCAGTTATGATAGATATATAGACTGGTACTAAATAAGTAAATATAGGTAGATAAATAACTTCAAGTATACATA AAAGAAAACAATAGTATTGATTGAAATTAATATTACATGCTCCAAGTATTAAATAGTATATCAGCCATATATTGTTGTTAGAGAATAGGGTAGAAAGTAG ATAATTTTATTTATTTATTTAACGATTAGAAATCACATGCTTTAAAGGAGAAGTTGTTCTTCCTTCCTCCACCATTGATTGGTGCCACTATTGTCACTTG AACATCTCATTTCTTCCTAATTATTACTTCTTTTGCTATTGCATATGATCCTAGAACCTGTAAAATATCTCTCAAAATCAGTACATTTATATTCATATTG CCGTGCAGAAATTATTTCTCGAAAATAAGTTAATTTTTGGTACCCTTCTTGGTATGTTTAAAAGGTTCTCAGGTCAAGGTCTAATAATAGTTAGACATGT GAAAGTGTAGTTTATGTTGATATTGTGAATTTTTATTCACTGCCAAGTTCAGTCCAATCAGTTTCTGTGTATTGAAATTTCATAGGTATGTATCATGTGT TGTTGGATGCCCGGTGGAGGGACGAATCTCTCCTTCAAAAGTGGCATATGTGGCTAAAGAACTATATGACATGGGTTGCTTTGAAATCTCTCTTGGTGAC ACAATTGGAGTTGGCACACCAGGAACTGTAGTTCCTATGCTTCTGGCCGTAATGGCTGTTGTACCAGCGGAGAAGCTTGCCGTCCACTTCCATGATACTT ATGGACAATCCCTTCCAAATATTCTTGTGTCCCTCCAAGTAAGTGAATTAACTATAGCTTGGACTTTTAATTTGCATGTGAATGGTAGTTTAGAGCTTAT TGAGCTTGCCTCTTCTACATATGCAATAAAAGTTGTAATTGGTGCACCAACCATTGAAGAAATTTAATTAATGGAGGTTACTTTGCTATCCATGATTTCA TCTTAGAATTAAATGTATATTAACTTTGATAATTTCATTCGAGATGTCATATTGAAATACTAAGAAATTCCCAAAAACTTTTCCTTAAAATGATTATGAT TGATGCATAAAAGTTATAATATTGACCATTTGGGTATCCCTGGCTAGTTTTACATGAAAAGTTGCCTTTAGCAACTATTTACCTCTCAACCTAAGGTTAA AAAGGTGTAACCATTACTTCTACTTGATACATTCAAGGAAGAAACCATGTGGAGTTAGATTTCTTTCTATCTCATACTTGCAGAATATGTGCCTCACTTT TGAACTATTTTCATTTCATTGGTATACTTTAAGTAATACTTATCTGAATCCACTGTGAAATGATCCTTGTGTATAGATTGATGAATGGATCAAAGTGTGC CTTGTTTTATTCTCTTTGATTTCCCCCTTTTATTGGAATTAAAATATCATACTTTTTAACCCTCATGTCTAGTTTTGTTCTGTCCCATTCTAGCATATCC ATCAAACTTAAAGTTTAGATTCAACAACCAAAGCCTTTTTCCGACTAGGTGGGGTCGGCTACATAAATTGAATGACACCATAATGTTGTATCGTAAACTT GACCTTTGTTTTTTTATATTCCGGCATTCGGGCATTCATTAATAGATGTTACTATTTTTTTTAAATCTAAACAGATGGGGATTAGTGCAGTGGATTCGTC TGTTTCTGGTCTAGGTGGGTGTCCATATGCTAAGGGAGCTTCAGGAAATGTGGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_76757; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_212437
| Blastp | Hydroxymethylglutaryl-CoA lyase, mitochondrial from Arabidopsis with 65.45% of identity |
|---|---|
| Blastx | Hydroxymethylglutaryl-CoA lyase, mitochondrial from Arabidopsis with 65.45% of identity |
| Eggnog | Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) (By similarity)(COG0119) |
| Kegg | Link to kegg annotations (AT2G26800) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019432091.1) |
| Pfam | HMGL-like (PF00682.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |