| Id Trinity | FTRINITY_DN58402_c4_g3_i4 |
|---|---|
| Name Transcript | Ll_transcript_32509 |
| Sequence | CTAACTTTCTTGATCGCAATCTCTCTCTTCCTCAGTTCCGATCAATATGTCTCGAAGATATGATAGCCGAACCACAATCTTCTCCCCGGAAGGACGTCTT TACCAAGTGGAGTATGCAATGGAAGCCATTGGAAATGCTGGCTCTGCAATAGGGATCTTATCAAAAGATGGGGTTGTGCTGGTTGGTGAAAAGAAGGTCA CGTCCAAGCTGCTGCAAACCTCAACTTCCACCGAGAAAATGTACAAGATTGACGACCATGTTGCATGTGCTGTGGCTGGGATAATGTCTGATGCCAACAT CTTAATCAATACCGCTAGGGTCCAAGCGCAACGATACACACTCGCCTATCAAGAGCCTATGCCGGTTGAGCAGTTGGTCCAATCTCTTTGTGATACTAAG CAAGGGTACACCCAATTTGGTGGTCTTAGGCCATTTGGAGTCTCATTCCTCTTTGCAGGGTGGGACAAAAACTTCGGCTTTCAACTTTACATGAGTGACC CTAGTGGGAATTATGGTGGCTGGAAAGCTGGTGCTATTGGTGCGAATAATCAGGCTGCACAGTCAATTCTAAAACAGGACTACAAGGATGAAATCACAAG GGAAGAAGCAGTACAACTTGCACTTAAGGTATTGAGTAAAACTATGGACAGCACAAGTCTGACCTCAGATAAGCTTGAACTGGCAGAGGTTTTTCTGTCC CCTACCGGAAAGGTCAAGTATGAAGTTCGATCCCCGGAGTCCCTGACTAAGCTTTTGGTTAAGCATGGGGTCACCCAACCAGCAACAGACACTGCCTAGT TTGTTTTTCATGACCGGAGTTCAGGACAGACGATTGGTGTCAGATGTGAATCTCAGGGCCTCTACTACTTATCTTCACCCATGATATGCACTGTCGCTGA TTCACAACTTACAGTTCATGCTCAATTTGGGTCATCCAAGTCTTCACAAGCTTCACAAATTGGTGCCTAGTCTGTCTAAGTTATCTAGTTTACATTGTGA GTCGGGTCAATTAGGGAAACATACTCGTAGTCGATATCCCAATCGAGTCGGTCAACGGGCGTCGTCCCCTTTTGTTTTAGTTCACTCTGATGTTTGGGGT CCTTGTCGTATTAGTACTAGTTTTGGGCATAAGTATTTTGTAAATTTTATTGATGATTTCTCTCGTTGTACGTGGTTATTTTTAATGAAAAATACATCAG AGTTATTCTCTAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_76796; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_32509
| Blastp | Proteasome subunit alpha type-4-A from Arabidopsis with 90.8% of identity |
|---|---|
| Blastx | Proteasome subunit alpha type-4-A from Arabidopsis with 90.8% of identity |
| Eggnog | The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity)(COG0638) |
| Kegg | Link to kegg annotations (AT3G22110) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446329.1) |
| Pfam | Proteasome subunit A N-terminal signature (PF10584.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |