| Id Trinity | FTRINITY_DN58407_c0_g2_i6 |
|---|---|
| Name Transcript | Ll_transcript_31885 |
| Sequence | AGGGCCATGAACTTAAGATAGTAGTCAGAAATAGAACTTGTTTGTGTCAACTTGAACAACTCAAACATGGGACAATCATAAGGTGATGGACCAAACTGTG ATTCCATAGCACGAGTGAGGTCAAGCCAAGAACTGATTGCAGAAATACGATGCAACATCTGGAACCAAGGTACAACATCCTTCTCAAAGTGCATAGCTGC AATATCCACACGAGAGAGATCCGGTGTATTATGGTAATTAAAGAACTTTTCTTCTTTAAATATCCATTCCAACACTGGGGTTGTTCCATCAAAGTGGGGA AAACCAAGAGAGATCTCTTTCACAGGGAATTGTGCACGAGCTTGAGCTGCCATAGAGGTCCCTGAGTTCGAGTTACTTCCATCCGTGGGAGACGTATTCA ACAGAATTTGTTGTAAAGCTCGTTGAATCTGATCCAAACAATCGCCATGCTCCGTGAAGCGAGATTCCATCAAGTGGTTCAAACAGTGAAGTTCCTCAGC GTGATTCATCACTGTGGCCTGTAAGTCTTTCAGACGCGTGTTCTCTACCATGGAAGCTCAATGAAAGCACCAATGAAACGTGTTAATTCGGGGTTGCAAT ATTAAGAAGGAAATTTCGTAAGAAGAAGATGATGACAGCAGAGAAAGTATGAAAATGTTTGTTAACTATAGCTCAAGGATCAAAAAGGATCCTGGCTGAA ATGTGCAATGAAGGGAAATTACAGAAAGAAGAAGAAAAAGTTGGGAACCGTTAGCAATGTTCCCTAACTAACAGCAGAGAAAATATCACATCAAAATCTA CCCATTCATTACATAATCATTCCATCTTATACTCTTCTTTTTCTCTCTCTTACTTCTCCTCAACAAACCGTTTGCCATCTGTCCTCCACTGCCCTCACCT TCCTTTTCCTCCTCTCTTTCCACAACTGCATTATTCCCCTCTCTCATCTGCTTCCCACGTGTTACAATACCCCCTCCATCAAAATCAACCTTGTCCTCAA GGTTGAAATTAGGATAAGATTGTTGAAAATCTTGCAAATCTTCCCATGTAGCTTCTTGGTGATCAGTGGTGTCCCACTGAACCAAAATTTGTGGAATTTG GATGGAATTCTGCACTACCAATCGAGTTTTCAGAACATTGATATGTTGCACTAATGGACCCTGCTGAATTGTTGTGAGAGGAAGTGGAAAATATGGCTGA GAAGAGTTGCCTCTAAACTGTTTCAATAAAGAGATGTGAAAAACAGGATGGATTTTTGCTGAATCTGGCAATTGCAATTGGTAAGCTACCTCTCCAATCC TTTTGAGAACTTTAAATGGACATTCAGATTCTCAGTATGTCCGTCTCAAGCTTAATTTGTTATTCTTTCTGAGTGCCACTGAATGTTGCCTATAAGGCTG CAATTTAACCAATGCTAAGTCACCCACTTCTAGATGAAAATCTCTCCTCTTTTTGTCAGCCTGCATTTTCAGTATGTCCATCTCCTCTTTCTTGCAATGC TATCTGAACTGAGGGTGGATCAGTAACTTGCAATTCATATTTGATAGTAGATGGAGGCACTCGACCAAAAACAGCTTGAAAGAGGGACATTTTTAAGCTG TGATGGTAAGAACAATTGTACCAGAATTGAGCCCATGGTAGCATCTGAACCCAAGCTTTAGGATTGTCAAAAACAAAACACCTTAAGTACATCTCAACTG TCTTATTCAGATTCTCAATTTGTCCATCTGATTGTGGATGATAAGAAGAACTCATAGCTAAAGTAGTGCCTTGAGCTTTGAATAAATGTTGCCAAAAGGA GCTGACAAAACTCTATCTCTATCTGAAACAATAGACTTTGGAATGCCATACAGCTTCACTATGTTCTGAACAAATGCATCTGCTACTGATTTGCTTGTAA AATCAGGTTTTAGAGGAATGAAATGCCCAAATTTGGATAATCTATCCACAACCACTAATATAACAGTAAAGCCCTTGTAATTTGGTAGAGTTGTAATAAA ATCCATAGCTAAATCCTCCCAAATCTGATTAGGAATTGGAGATGGTTGTAAGAGACCAGCAGGCATGATATTTTCAACCTTTGCTTGTTGACAAATTTTG CATTCTCTTACAAACTTCCTTATGTCTTGCTGCATTTTTTGCCACACAAATTGAGAAGTTATAGAGACCAAGGTCTTAGTCATCCCTGCATGTCCACCTG TTTTAGAAGCATGAAATTTGTGCATCACTTTGAGTTTGAAATCCCAATTATCAGGAACCATGATTTTTCCTTTGTGTAACAAAAACCCTTGCCATACTGC ATAATTCGAGTTGTGTCCAGAAGTATTAGCAGTTGAGTTGAGTAATGCTTTTAATTCTACATCCTCATGTTGCAACTTAAGTAATTCTTCAAGCCAAATG TTTATAGGTTGTGACCATGCCAAGAATAAGCTTCTGGATAGTGAGTCAGCTGCAATATTCTCCTTACCAGGTTTATATTGGATAGTGAAATCATATCCTA ATAGTTTAGGTAACCATTGCTGTTGTTCAGGGGTTTGAAGAGATTGTTCCAATAGTTCTTTGAGGCTTTTCTTGTCAGTTTTAATGATAAACTTATGCCC CAACAAATAATGTCTAAACTTTGCTAATGACTCAGTGATGGCAAAAAACTCCCTAGCATAAGCTGACTGTTTCTGCATCCTAGGTGATAATTTCTTGGAG AAGAAGGCAATAGGATGATTATTTTGACTAAGCACTACACCAATACCAAAACCAGAAGCATCAGTTTCCAGAATGAATGGAGCTGCAAGATTAGGAGGGG CTAAGACTGGTGCTGTGGTTAAAGCTTTTTTAAGTTGAAGGAAGGAGTCTGAAGCAGCATTAGACCATTTGAAGGAATCCTTCTTAAGTAGGTCAGATAA AGGAACAGCAATGGTAGCATAATGCTTGACAAATCTCCTATAATAACCAGAAATACCAAGAAAACCTCTGAGTTGTTTCAGATTAGTAGGTTGTGGCCAC CTTTGTATTGCTTCCAACTTGTCATTTTTCATGGCAACTCCTTCACCTAAAATAGTGTGACCCAAGTATTCAATTTGTTGTACTCCAAAAGAACACTTGG AAAACTTAGCAAAGAGCTTGTGGTTCTGCAGAATTTTGAGGACCATTTCCAATTGAAACAGATGGTCTTTCCAAGAAGAACTATATATCAAAATGTCATC GAAAAAGACCAAGAAATTTTTTCTCAATAAACCTTTGAAAATGTCATTCATCAAGCTCTGGAATGTGGCAGGGGCATTAGTCAATCCAAATGGCATAACC AACCATTCATAATGGCCTTGATGAGTTCTGAAAGCTGTCTTGAACCTATCAGCAGGATTCAACAATATTTGATGGTAGCCAGATCTCAAGTCCAACTTGG AAAAGAAGCAAGCACCAAAGAGCTCATCAATTAATTCATCCACAGTTGGTATTGGAAAAGAATCTTTAATAGTGAGGGCATTAAGGGCCCTATAATCAGT GCAGACCCTTCATGAACCATCTTTCTTTTTCACTAAGATGATTGGGGAAGAAAAAGGGCTCTTGCTTGGTTGAATGATCCCTTGCTGAAGCATTTCATTA ACCAATCTCTCAATTTCTTCCTTCTGACTATGAGGATACCTATAAGGTTTCACTTTCACAGGATTAGAGCCTTGGATTAATGGAATAGAATGATCATGTG ATCTGGATGGAGGAAGAGCTATAGGAGTTGCAAAGACTTCTTTGTAATTATGCAATAACAAAGCCAAATCTGGATGCAATGCTTCAGATAAGGGTGTGAA TGGACTGAACACACTTTGATCATCCATCAATTGCATACTGAAAATCTCAGCAATAGCATCAGTATTCATCATTCTTCTTAAGTGATGCAATTCAGCCTGC TTTGGAAGCAACTCTGGATCACCTCGAAGAGAAGTAAACCTGCCCTGCCACATGAACTTTATCTGCAATGTCTCATAATCAGCAATATGGGGCCCAATAG TTTTTAACCAAGACGCTCCAAGAATGAGGTCAACACTTGAAATTGGCAACAAGAAAACAGGCAGCTGAAAAGAATGTCCTTGAGCATGAACCTTTAATTC TTGAATCACTCATTCAGCAGACATATAATTGCCATTTCCAACCATGACTTTGAACCTAGGGGCAGGTTCAATAGGCAATTTGAGAAACTTAGCAATCCTA GGTTGCAGAAAATTATCAGAACTTCCTCCATCAATTAAGACAGTGATGGAAAGTTTAGCAATATGAGCTACAAATCTGATTGTTCCTATCCCTAAACCAC CTTTCAATGCATTTAGAGATAAGTGGTGATCCATAGCCTGCTCATCGTGGGAAACCTCTGCTGATATAGCAGGTTCCACTTCATCATCTTCCAGCTGCAA AAACAACACTTGTCTATTGGGGCACTTGTGGTTGAAGGTGAATTTGTCATCACAGAAGTAGCACAACCCTTTCTCCCTTCTTAATTGCATCTCAGCTGGA CTAATTCTCTTGACATTGGAATTTCTCAAAGGGGGTCCAACTGGTGTTGGCAACAGTCCAGAATTATTACTTTTAAGAATTGGTTTGGAACTACCGAAAG TATTAGGGACATTAGCCACATTATGAGATGATATTGGGGAGTATTTATGAGTGTAAGTTTAATTGAAAGCTTTAGGCACAGGAGTATATCTTTCCTCATA CAACCTTGCTAAGGCTACAACTCTAAGCAATGTAGGTGTTGCCATTGCTACCACATCTCATTTGATTTCCTTATGCAGTCCCCCCACAAAACAATTCAAA AGTGCTTCATCTGATAATCCTATCGATCTATTAGCAAGGGCCATGAACTTAAGATAGTAGTCAGAAATAGAACTTGTTTGTGTCAACTTGAACAACTCAA ACATGGGACAATCATAAGGTGATGGACCAAACTGTGATTCCAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_76843; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_31885
| Blastp | Transposon Ty3-I Gag-Pol polyprotein from Saccharomyces with 34.33% of identity |
|---|---|
| Blastx | Transposon Ty3-I Gag-Pol polyprotein from Saccharomyces with 36.03% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (YIL082W-A) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425047.1) |
| Pfam | Reverse transcriptase (RNA-dependent DNA polymerase) (PF00078.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |