| Id Trinity | FTRINITY_DN58410_c0_g1_i13 |
|---|---|
| Name Transcript | Ll_transcript_31471 |
| Sequence | CTTCATTCATGTTCATTTTGTCTTTGTTCTCACACAAACAAAACTATATAATAAAATATTCAACTTCTACTTTGATCCCAGCTACATCATTCCCCATAAA CACTACTACTACCTTCCCATTTCACGATTCAGCTTCACTTGTTTTCCATTCTTTGCTGGTTCAAAGTGTTGTTTTTATTCTTCTAATCAGAACAATCCCA CTGCTATGATTTACTACTCCTGTTTGTGATTCAGCATTGACATGAGCTTTTGATGTATCTGGAGGAGTAGGACGTAGCAGTTAAGTTGCATTTTATAGAA AAGGCTCAGTTTTTTTTGTTGATTCCACAACTTCATTGCAGCCAGTACTGTTGGGATATTCTTCAACTCCGTTTACCTTTCTGGGCACGCTGCTGTTTCT ACTATTGAACCATGGGTTCAGCAGTTAGGATTGTCTTCTTCTGAAAAAAGAAAAACTTGGGGAATAAACAAGGCTAAATCTTTGTTTCTGGATTTGAATT TGTTTGGGGTCATCTTTTTCCATAATGAAGGCTCCTCCATCAAATGGTAATTTGCCTAATTCAGCTGAAGTAGAAAGGAAGACCATCGATTCAGAGTTGT GGCATGCTTGTGCCGGACCTTTGGTTTCTTTGCCTCCAGTTGGAAGTCTCGTGGTTTACTTCCCTCAAGGACACAGTGAACAAGTTGCAGCTTCTATGCA AAAACAGACAGACTTCATTCCCAGTTACCCTAACCTTCCATCCAAGTTGATTTGCATGCTTCGCAATGTTGTTCTACACGCTGATCCGGAAACTGATGAG GTCTATGCACAGATGACCCTTCAGCCTGTAAACAAATATGACAAGGAAGCAATACTGGCATCAGATATGGGTCTCAAACAAAGCCGACAACCTACTGAAT TCTTTTGCAAAACCCTCACAGCTAGTGACACAAGCACTCATGGCGGATTTTCTGTGCCTCGTAGAGCAGCTGAGAAAATATTCCCTGCTCTGGATTATTC AATGCAACCTCCTGCTCAGGAGCTTGTTGCCAAAGATTTGCATGACAGTACGTGGGCATTTAGACATATTTATCGCGGACAACCAAAGAGGCATCTACTG ACTACAGGATGGAGTGTATTTGTCAGCACGAAAAGAGTGTTTGCTGGAGATTCTGTTCTGTTTATCAGAGATGAAAAACAGAATCTTCTTTTAGGTTTAA GGCGAGCTAACAGACAACAGGCAGCACTGTCTTCATCAGTAATATCCAGCGACACCATGCACATTGGTATTCGTGCCGCTGCAGCTCATGCTGCTGCTAA TGGAAGTACATTCACTATTTTCTACAATCCAAGGGCATGCCCGTCAGAATTTGTTATTCCACTGGCTAAATACAGAAAAGCTGTATTTGGGACCCAGCTT TCAGTTGGCATGAGATTTGGTATGATGTTTGAGACAGAGGAATCGGGTAAGCGCAGATACATGGGTACAATAGTTGGTGTAAGTGACTTGGATCCTTTAA GGTGGCCTGGTTCTAAGTGGCGTAATGTTCAGGTGGATTGGGATGAGCCAGGTTGTGGAGATAAGCAAAATAGAGTTAGTGTATGGGAGATTGAGACTCC TGAAAGTCTTTTTATCTTTCCTTCTTTGACTTCGGGTCTAAAAAGGCCATCACAATCTGGATTTTTGGGTAAGCTTCTCAATTCAATTTTCCTATTTTGA CAATGAGTCTTTGTTTGGTGACCAGTTAGTTGATTGGTGCAGAAAATGAGTGGGGGAATTTGATAAGAAGACCTTTTATAAGAGTTCCTGAAAATGGAAC ATTGGAGCTCCCGAATTCAATATCAAATCTCTACTCACAATACATGATGAAAATGCCTTATAAACCTGAACTTATTAACAACAGTGTAGCCTTTTTATCG ACCATGCAACAAGAATGTGCTGCTACAAGAGATCCCTTAGAGATGAAGACAACATTGGCGCAAGAGAGCCATAAACATCTTGCCAGTTCAGAAGGCATGC AACCAAAAAATATGAATTCTCAGTTTGTCCCTGACCAATCTAATGTCTTAAACATGCATTCAGTGTCGAAAAGTGATCAACCTTCTAAATTGCACCCACT TGCCAAAAATGATAATAATCTGTCTTCTGGTACAGTTATTGATACGCCAAAATTAGAATCTGAGGTGTTAACTGATAACATGTTTGACCTCCCTTCCATT AACGACAGTAGTAACATTGAAAAAATGGCTGCAAATCCGGTTATTTCTCAAAACCTTGCTAGCCCAATGACTTTCCTCAATCAAAACCAGAATACATTAC TCTGTCAATCTAACCCATGGCCCATGCAGCCTCAGATAGAATCATCTATATCTCATCATCAACTGATTGATGTGTCTCAATCCGATCCTGCTTTTGCGAA TGCTATGTTTCCTCAACTAGACATCGATGACTTGATGATGTACTCTTCATGCCAACCTTTATCAGATTTGCAAGAACAAACTGCGCTCCAAACTCAAGCA GTGAATGCCCCTTTACCTCCAATGAGCCAAGAAATATGGGATCATTATGTCAAGAATTTCAAGTTTTCATCTCAGGCTGATCATCTAACATCAATGTATC AGCCAGGGATGTATGGCCTAAATGGTATGTCTAGTTCAAACAACATGAAGGATCTTTCATCTGAGAGCAACAAGCAAAGTGAAATTTGTGTCAATGTGGA TGTTAGTAACAGTATAAGTACCACCACTATGGTTGATCCTTCTACCTCAAGTACCATTTTGGATGAGTTTTACACCTTGAAAGACAAGGATTTTCAGAAT CAACCGGATTGCATGGTGGGAAACTTAAGTTCCAGCCAGGATGTCCAGTCTCAGATAACCACAGCAAGCCTAGCAGAGTCACATGCCTTCAACTCTGGTG GTACATCATCAAGCCATGTTGATTTTGATGAAATCAGCTTTTTGCAGAAAAACTCTTGGCAACCAGTAGCTCCTCCACCTATGCGAACTTACACGAAGGT GCAAAAGGCAGGTTCTGTCGGAAGATCAATTGATGTCACCACATTCAAAAACTACGAGGAGCTGATCAGCGCAATTGAGTGCATGTTTGGACTCTATGGC CTTCTGAATGATACCAAAGGTTCTGGATGGAAACTAGTATATGTAGATTATGAGAGTGATGTTTTACTTGTTGGAGATGATCCATGGGAAGAATTTGTGG GGTGTGTCCGGTGCATAAGAATTCTATCACCTTCAGAAGTTAAGCAGATGAGTGAAGAAGGGATGAAGCTTCTAAACAGTGGTGCCTTGCAAGGGATCAA TGGTTAGAATTTGAGGTGGCTGCAACAAATATCACTAAGCCATTCTTTGAAAGTAAAGGCATTTTGCTGTGGGATAAGTCCTATGTTACCTAGTCATTAT AAAGTTGACATGTAATGTATGAACTAAATTTCACTTATTTGCCAGACATGTAATGTATGTAAGGTTAGATGTTACAATGGCTCAATGGTTGCATAAATTA TGTTGCAATGCACTCTTGGTGGCAAGTGAAAAGTACTAAGCTTTATTGCTTATCATTGTCATGCTAACCAATCAACCATCCATTACTACATTATTTCCAT GCTAGTTGGGTTATAAACTTGAACTTATCAAATGAAAAGAAATAAAAAAATGAAGGAAATGAGCACTAATAATCAAAAGTTGTGCATCAAGGGTTTATTT TCATTAGTTTTTCTTTC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_76866; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_31471
| Blastp | Auxin response factor 5 from Arabidopsis with 40.58% of identity |
|---|---|
| Blastx | Auxin response factor 7 from Arabidopsis with 80.95% of identity |
| Eggnog | auxin response factor(ENOG410Y913) |
| Kegg | Link to kegg annotations (AT1G19850) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019432536.1) |
| Pfam | AUX/IAA family (PF02309.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |