| Id Trinity | FTRINITY_DN58410_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_31462 |
| Sequence | CTTCATTCATGTTCATTTTGTCTTTGTTCTCACACAAACAAAACTATATAATAAAATATTCAACTTCTACTTTGATCCCAGCTACATCATTCCCCATAAA CACTACTACTACCTTCCCATTTCACGATTCAGCTTCACTTGTTTTCCATTCTTTGCTGGTTCAAAGTGTTGTTTTTATTCTTCTAATCAGAACAATCCCA CTGCTATGATTTACTACTCCTGTTTGTGATTCAGCATTGACATGAGCTTTTGATGTATCTGGAGGAGTAGGACGTAGCAGTTAAGTTGCATTTTATAGAA AAGGCTCAGTTTTTTTTGTTGATTCCACAACTTCATTGCAGCCAGTACTGTTGGGATATTCTTCAACTCCGTTTACCTTTCTGGGCACGCTGCTGTTTCT ACTATTGAACCATGGGTTCAGCAGTTAGGATTGTCTTCTTCTGAAAAAAGAAAAACTTGGGGAATAAACAAGGCTAAATCTTTGTTTCTGGATTTGAATT TGTTTGGGGTCATCTTTTTCCATAATGAAGGCTCCTCCATCAAATGGTAATTTGCCTAATTCAGCTGAAGGTGGGTTTCTCTCAAGAAAGGAAGACCATC GATTCAGAGTTGTGGCATGCTTGTGCCGGACCTTTGGTTTCTTTGCCTCCAGTTGGAAGTCTCGTGGTTTACTTCCCTCAAGGACACAGTGAACAAGTTG CAGCTTCTATGCAAAAACAGACAGACTTCATTCCCAGTTACCCTAACCTTCCATCCAAGTTGATTTGCATGCTTCGCAATGTTGTTCTACACGCTGATCC GGAAACTGATGAGGTCTATGCACAGATGACCCTTCAGCCTGTAAACAAATATGACAAGGAAGCAATACTGGCATCAGATATGGGTCTCAAACAAAGCCGA CAACCTACTGAATTCTTTTGCAAAACCCTCACAGCTAGTGACACAAGCACTCATGGCGGATTTTCTGTGCCTCGTAGAGCAGCTGAGAAAATATTCCCTG CTCTGGATTATTCAATGCAACCTCCTGCTCAGGAGCTTGTTGCCAAAGATTTGCATGACAGTACGTGGGCATTTAGACATATTTATCGCGGACAACCAAA GAGGCATCTACTGACTACAGGATGGAGTGTATTTGTCAGCACGAAAAGAGTGTTTGCTGGAGATTCTGTTCTGTTTATCAGAGATGAAAAACAGAATCTT CTTTTAGGTTTAAGGCGAGCTAACAGACAACAGGCAGCACTGTCTTCATCAGTAATATCCAGCGACACCATGCACATTGGTATTCGTGCCGCTGCAGCTC ATGCTGCTGCTAATGGAAGTACATTCACTATTTTCTACAATCCAAGGGCATGCCCGTCAGAATTTGTTATTCCACTGGCTAAATACAGAAAAGCTGTATT TGGGACCCAGCTTTCAGTTGGCATGAGATTTGGTATGATGTTTGAGACAGAGGAATCGGGTAAGCGCAGATACATGGGTACAATAGTTGGTGTAAGTGAC TTGGATCCTTTAAGGTGGCCTGGTTCTAAGTGGCGTAATGTTCAGGTGGATTGGGATGAGCCAGGTTGTGGAGATAAGCAAAATAGAGTTAGTGTATGGG AGATTGAGACTCCTGAAAGTCTTTTTATCTTTCCTTCTTTGACTTCGGGTCTAAAAAGGCCATCACAATCTGGATTTTTGGGTAAGCTTCTCAATTCAAT TTTCCTATTTTGACAATGAGTCTTTGTTTGGTGACCAGTTAGTTGATTGGTGCAGAAAATGAGTGGGGGAATTTGATAAGAAGACCTTTTATAAGAGTTC CTGAAAATGGAACATTGGAGCTCCCGAATTCAATATCAAATCTCTACTCACAATACATGATGAAAATGCCTTATAAACCTGAACTTATTAACAACAGTGT AGCCTTTTTATCGACCATGCAACAAGAATGTGCTGCTACAAGAGATCCCTTAGAGATGAAGACAACATTGGCGCAAGAGAGCCATAAACATCTTGCCAGT TCAGAAGGCATGCAACCAAAAAATATGAATTCTCAGTTTGTCCCTGACCAATCTAATGTCTTAAACATGCATTCAGTGTCGAAAAGTGATCAACCTTCTA AATTGCACCCACTTGCCAAAAATGATAATAATCTGTCTTCTGGTACAGTTATTGATACGCCAAAATTAGAATCTGAGGTGTTAACTGATAACATGTTTGA CCTCCCTTCCATTAACGACAGTAGTAACATTGAAAAAATGGCTGCAAATCCGGTTATTTCTCAAAACCTTGCTAGCCCAATGACTTTCCTCAATCAAAAC CAGAATACATTACTCTGTCAATCTAACCCATGGCCCATGCAGCCTCAGATAGAATCATCTATATCTCATCATCAACTGATTGATGTGTCTCAATCCGATC CTGCTTTTGCGAATGCTATGTTTCCTCAACTAGACATCGATGACTTGATGATGTACTCTTCATGCCAACCTTTATCAGATTTGCAAGAACAAACTGCGCT CCAAACTCAAGCAGTGAATGCCCCTTTACCTCCAATGAGCCAAGAAATATGGGATCATTATGTCAAGAATTTCAAGTTTTCATCTCAGGCTGATCATCTA ACATCAATGTATCAGCCAGGGATGTATGGCCTAAATGGTATGTCTAGTTCAAACAACATGAAGGATCTTTCATCTGAGAGCAACAAGCAAAGTGAAATTT GTGTCAATGTGGATGTTAGTAACAGTATAAGTACCACCACTATGGTTGATCCTTCTACCTCAAGTACCATTTTGGATGAGTTTTACACCTTGAAAGACAA GGATTTTCAGAATCAACCGGATTGCATGGTGGGAAACTTAAGTTCCAGCCAGGATGTCCAGTCTCAGATAACCACAGCAAGCCTAGCAGAGTCACATGCC TTCAACTCTGGTGGTACATCATCAAGCCATGTTGATTTTGATGAAATCAGCTTTTTGCAGAAAAACTCTTGGCAACCAGTAGCTCCTCCACCTATGCGAA CTTACACGAAGGTGCAAAAGGCAGGTTCTGTCGGAAGATCAATTGATGTCACCACATTCAAAAACTACGAGGAGCTGATCAGCGCAATTGAGTGCATGTT TGGACTCTATGGCCTTCTGAATGATACCAAAGGTTCTGGATGGAAACTAGTATATGTAGATTATGAGAGTGATGTTTTACTTGTTGGAGATGATCCATGG GAAGAATTTGTGGGGTGTGTCCGGTGCATAAGAATTCTATCACCTTCAGAAGTTAAGCAGATGAGTGAAGAAGGGATGAAGCTTCTAAACAGTGGTGCCT TGCAAGGGATCAATGGTTAGAATTTGAGGTGGCTGCAACAAATATCACTAAGCCATTCTTTGAAAGTAAAGGCATTTTGCTGTGGGATAAGTCCTATGTT ACCTAGTCATTATAAAGTTGACATGTAATGTATGAACTAAATTTCACTTATTTGCCAGACATGTAATGTATGTAAGGTTAGATGTTACAATGGCTCAATG GTTGCATAAATTATGTTGCAATGCACTCTTGGTGGCAAGTGAAAAGTACTAAGCTTTATTGCTTATCATTGTCATGCTAACCAATCAACCATCCATTACT ACATTATTTCCATGCTAGTTGGGTTATAAACTTGAACTTATCAAATGAAAAGAAATAAAAAAATGAAGGAAATGAGCACTAATAATCAAAAGTTGTGCAT CAAGGGTTTATTTTCATTAGTTTTTCTTTC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_76866; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_31462
| Blastp | Auxin response factor 5 from Arabidopsis with 40.58% of identity |
|---|---|
| Blastx | Auxin response factor 5 from Arabidopsis with 72.49% of identity |
| Eggnog | auxin response factor(ENOG410Y913) |
| Kegg | Link to kegg annotations (AT1G19850) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019432536.1) |
| Pfam | AUX/IAA family (PF02309.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |