| Id Trinity | FTRINITY_DN58412_c0_g3_i15 |
|---|---|
| Name Transcript | Ll_transcript_31449 |
| Sequence | CAAACTATTCCCCCTTGTCAAATTTAAATGGACCCAATATAGAGTAATAGGTCCAATAAAAATTAATATGAGATATAGAACCCAGATTTGGTGTCACCAG CAATGTTAGAAGCAGTGGAAAGCAAAGCAAAAATCATAACTTTATTTTTTCCTTTTTGCCTTCAAATTTTAATGATTTGATTCATGGAAAGTATTTAACG TCCATTAGTTATAGCATGCTATATATAGACACTAGGAGAGAAGTGAAAGTCATTGTCTTGTCAAAAATCTTCAAACCAACGTTGTTTTTCGACCACCCTC AGTTTTTGTTATACCCATTTCTCTGATTCTTTCCATGAACTTTGATTCATAATCTGATACCCTTTGGTGAAAAGTTGAAAACTTTGATGGAACAGAAGCA CGTTCTGTTGTCTGCATTGAGTGTTGGGGTTGGGTTAGGTGTGGGGCTAGGATTGAGTTCAGGTCAGAAATGGATTGGAGGGAATGGTGACTATGATGAG ATTTCTGAGGAGCAGATTGTGGTGGAGCTCAAGAATCATGTGGTTGATGGGAAAGATAGCAAAGATACATTTGATGACTTTCCTTATTACTTAAGGTGAT TTAAGATTTCTTTAGAGTATGTAATTAAGTGACTAGATTTTGATGGTTTACAAATCTATGTTTTTTGTTGGAATTTTGACCCTGCAGAGTGACATATTAA ACATTGTCAGCATTTTTTTGGGGTTGTATTGAAATTTATATTAGTAATTTAGTATTATTATAAACCTTTGATGTCAAAGATGTTTTAGATTTTAGACATG GGTCTGTGTCTGGTTGACTTTTAAATTTCATGGCATTCTGCAGTGTACTGAATCTTCTGGTACATATAAATTTATTCTTTTTATGGGGCTTCTATGATTG ATTCACTTCATTTCTCTGAGATTTTCTTAGATTGTTTGTTATTTACTTCACTTTTGCTGCTTTGCAAATCCTAAAATTTCTTATGTTTTCTGTTTGGCTA AGTTCTGTTTGGTTTTCAAAGTAAATTGTTCTTTGAGTATCTGTTGGGTCAGAAACAGAAGCTTCAAGAGATGAGTGATGCAACTTCCCCTGATAAGTAT TTGTTGTTCTCTGAAGACAAAAGGATGAATCTGACATCATGGCGAATTTTTCTTTCTTTTATTTATTTATTTGTAACTACAATTTGTATGTTTTGTAGTA AAAAAATTGATGTTCAGAGTCTAAGACCTAGTTTATCATATGAACTTGCAGTTATTAATTATATGGTAAAACTTAGTACTGTATTTAAGATTCCAGCTTC ACCCTCTTCATGGAAGATGTAACAACTCAAGTACTGGAAGTTTCTGCTTACTAGTTGTCCTTGCAATCTTTATCATAGCCATTAATTTCTTCTTATGTTC TCTAGCTTCTTAATTTTGTTATTTTATATTCCAACACACACTAGACTCAGTCTTCAAGTTTTATAACAGTATTGTTTCCAGAAATATGGTCTATATTTAG CATAGATCTTTATATGTGAAGCTTAAGTCCAGTCCCCTGGTGGATTTGAACTAAACTTGGAGGAATTTTATTTTAACAACTACTTTCCTGGTTCATACTG AAATATTGAATAAATTTTTTGTCCTGGCTGCACCATATCTTATGTTTCCGTGTGATGATGGCAATGACAGTGAAAGAACTCGAGCTTTGATGTCAAGTGC GGCATATGTTCATTTGAAAAGTCAACACATTTCCAAGCACACCCGAAACCTCTCACCAGCGAGCAGGTCTATTTTGCTCTCTGGTCCTACAGAACTTTAC CAGCAAACACTTGCCAAAGCTTTAGCACATTGCTTTGAATCGAAGTTGCTGTTGTTAGATATTACAGACTTCTCCTTGAAGATTCAGAGTAAATATGGGT GTTCTAGAAAAGAATCATCTTTTAGAAGGTCCATATCTGAGGTGACTTTGGAGCGAATGTCTGGCTTGTTTGGTTCCTTTTCCATCCTCCATTCAACAGG CGAAACTCGAGGGACTCTACATCGACAAAGCAGCGTTGCTGTTGAAAGTTCCAATAATGCTCACAAGTTTCGTAGAAATGCTTCTGCTGCATCTGATATA AGTAGCACTGCTTCCCAGTGTGGTCCAATAAATCCAGCTCCTTTAAAGCGCACAAGCATCTTGTGTTTTGATGAAAAGGTTTTCGTGCGGTCACTTTACA AGGTTATAGTTTCTATCTCAGAAACTGGTTCCATCATTTTATACATCGGGGATGTTGAGAAACTCCTTCTCCAATCACCAAGGTTATACAATTTATTACA AAAAATGATAAAGAAACTTTCAGGCTCCGTGTTAATACTCGGTTCCCAGATAGTTGATTCACAGGATGATTGCAAAGAAATTGATGAAAGGCTCAATATG TTATTCCTTTACAACATTGAGATCAAGCCCCCAGAAGATGAAGCTCATCTTGGCAGCTGGAAAGCCCAAGTGGAAGAGGACATGAAAGCTCTTCAATTTC GAGATAATAGAAACCACATTGCAGAAGTACTTGAAGCAAATGACATTGACTGTGATGACTTGACTTCAATATGCCATGCAGACACTATGATACTCAGTAA TTATATTCAAGAAATTGTGGTGTCTGCAATATCTTACCATTTGATGAATGCCGAGGATCCAGAATACCGTAATGGAAAGCTAGTTATATCAGCCAAGAGT TTGTCCCATGGATTGAATCTGTTCCAGGAAGGTAAAAGTAGTGGGAATCTGAAGACTAATGAACCTATCAAGAGTGACAACCAAGCACCTGAAAACAAAA ATGAGACAGAGAAGACTGTCCCTGTGACGAAGAAAGATGCCGAGAATCCTGCTCCAGCAAAATCAGAAGTACCTGACAATGAGTTTGAGAAACGCATAAG ACCAGAGGTTATCCCCGCAAACGAGATAGGGGTTACATTTGCAGATATTGGATCATTGGATGATATTAAAGAGTCACTTCAAGAGCTGGTCATGCTTCCC CTTAGAAGACCAGACCTCTTCAAAGGTGGCCTTCTAAAGCCATGCAGAGGCATATTGCTTTTCGGGCCTCCTGGTACTGGAAAAACAATGCTAGCAAAGG CAATTGCAAATGAAGCTGGAGCAAGTTTCATCAATGTCTCAATGTCCACCATTACTTCAAAATGGTTTGGCGAAGATGAAAAGAATGTCCGAGCTCTGTT CACACTAGCAGCAAAGGTTGCCCCGACTATTATCTTCGTCGATGAGGTTGACAGCATGCTTGGCCAGCGGACTAGAGTTGGAGAGCACGAGGCCATGCGG AAGATTAAAAATGAATTCATGACACACTGGGATGGACTATTAACAAGACCTGGTGAGCAAATTCTGGTTCTTGCTGCAACAAACAGACCATTTGACCTTG ATGAAGCAATTATAAGACGATTTGAGCGCAGGATTATGGTTGGTCTTCCATCTGCTGATAACAGGGAAATGATCCTGAAAACTCTTCTAGCTAAGGAAAA ACATGAAAACTTAGACTTCAAGGAACTAGCAACCATGACGGAAGGATTTAGTGGAAGTGATCTCAAGAATTTGTGCATCACTGCGGCTTATCGACCTGTT AGGGAGCTAATACAGCAGGAGAGAAGGAAGGACATGGAAAAGAAGAAGAAAGAACCAGAAAGTCAAGGCTCTGAAGATGCTTCAAGCAATGAAGAAGATA AAGAAGAAGTAGAGATTATGCTTAGGCCATTGAATATGGAAGACATGAGACAGGCTAAGAGTCAGGTGGCTGCAAGTTTCGCCTCGGAAGGAGCAGTAAT GGGTGAGCTGAAGCAGTGGAACAATTTGTACGGAGAAGGAGGTTCAAGGAAGAAAGAACAGCTCACCTACTTCCTTTAGATTGCAAGAAGCTGATTTAAT TTTCGAGTTGTCAGCCTTCATAAAAAGGATATATTTTAGCAAAGAATGGAGTACATCAGAGTGTTGAATTCAAAGCATTCCCAAGTGTCTCAAGACCAAA AGCCAAGAGATCATATCAGTCCCAAAAGAGCACAAATCCTGGCAATATATCCAAAGAATGCATAGATCATCATACATCATGTTCCGGAGAGGGTTCTCGG ATTTTGTTTTATTGCCTAAAAACCAGGCCGCCTGTATTTGGGGTTTATATTCTTTCGTTTTGCAAGATGCAATTGCTGTTAAGACAGTAGTAATTCACAT CAATCCTTTTAGGTATGCTGTATTATATATGTACATTGATTGTTTAGCTGCACTGCTCATAGAGTTTGGTTCAATTATTTATTTGAATTCTCTTGCACAT TACTGCCAAGTGCCAACTGTCTTTTAACTGAAATACCTATGAATGCCATCATGAAGGTAAAAATAAGGACAACTTCTGCAAAGTTATTTGATTATTTAAC GATTATCGTCGAAAATTTCACTGACTAATATAGTATTGAAACTTCAGGACAGTAATACTGAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_76876; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_31449
| Blastp | Protein MSP1 from Saccharomyces with 45.42% of identity |
|---|---|
| Blastx | Fidgetin-like protein 1 from Caenorhabditis with 48.51% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (YGR028W) |
| CantataDB | Link to cantataDB annotations (CNT0000090) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449731.1) |
| Pfam | ATPase family associated with various cellular activities (AAA) (PF00004.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |