| Id Trinity | FTRINITY_DN58413_c0_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_32596 |
| Sequence | ATTTGATTTAAGAAATAATTTCTAATATCAAACAATGTTTAAGCACGAGTTACCAACAAAAAATTATTAAAAATGTATAAGACTTGAACCTTGAAATCAC TACTTTGCTTAACAAAAACTAAAAGAAGAAAAGATAAAGTGAAGTTGTTCATGGGAGGCACAACTTCATGCAATTTGCACGATTTGGTAATATTTATAAA GTTGCACCATATGGGTAATTTTTTTTAGTCAATGTACATACACAAGTCGTGTAAATTTGTTTATACTTATTTAATGGCGGCTAAAGAGTCTAGGACGCAA GTTCCATTTTAATAACACAGAAAAGTAGGAAGATCTGTTGATTATACTGTATAACAACACCATATTGAGTTTCTGTCTTCAACTTTTGTAGATCTGCTTA GCTTTTCTGGGTTGTAAGAACATGTTTTTGCGTTGTAAAAGTGGTTGTAAAAGCACTTAAAAAGGTAAACGTGTTTTTATTATTTAAGAGTGAACGTGTT TTAAGCAGCACCAGTTGTTTCCTACCTTCACACCCTTTTATTTCATCCACTTGACCCTTCTCTATTCTTCAACCAAGTTCTCTTTTTTCTCTTGTCTTCA AAATACAACTTGGCTTGTTAACAATAAAGTTGTTCACTTTTAGTTTCTTGTGATAGTTATTGCTCAATAAATGGCACTTCTTCATTCTGCTTAATAAACA ACCATGTTTCATTGCTTTCTTTCAGGTGGCAGAGAATAAACAATAGTGGTTCCTTGGTTGTAACATAGCTGAAGAAGTTTTCTGTTGTGTGCATAAACAT GCGATCTGAAACTTCAACTTGGGTCACTTCCCTTTCATGTTCAATCTCAGGAGATGTTTCATTTGTTTCAAATCTACCTCATTGGCTTAGATTCATTTTC CTCTCTCCATGCCCTCAGAGAGCACTTTTCTCTGCTGTGGATGTCTTACTCTTGTTAACTTTCTTAGTGTTTGCACTCACAAAGCTATATTCTAGGTTCA CTTCTAATGAGAACAACCACGCAGAACTCAACAAGCCCCTTATAAGAAATAGAGAAGCTTCTGTCACAACAACAATATGGTTTAAGCTAACAATAACTGC AACATCTGTTTTGGCCATATTGTACACTGTTGCTGGTATTTTGGTTTTTACCAGTTCAACACAGGTGACATGGAAGGTGATTGATGGAGTGTTTTGGTTA GTTCAGGCCATAACACAAGTTATACTTGTAATCTTGATTATTCATGAGAAAAGATTTGAAGCTGTTGCACATCCTTTATCCCTTAGGATTTATTGGATTG CAAATTTTATCATTGTTGCTTTGTTCACAGCTTCTGGTGTTATTCGTTTTGTCTCTGTGGACGTGGAGGAAACCAAACACTTCAGCTTCTTGGTGGATGA CATAGCTTCTTTCATTTCTCTCCCTTTGTCACTTTTTCTGCTATTTGTTGCAGTTAAAGGGTCCACTGGGATTAAGTCCAGCAACGACGATTCGCGACCG CTTAATGGTGATAATACCAAGCTATATGATGATGTTACTGGGAGAAAATCCAGTGTTACTGGCTTTGCCTCAGCTTCTTTAATATCCAAGGCCTTTTGGA TTTGGATAAACCCCTTATTGAGCAAAGGGTACAAGGCACCACTGAAGATTGATGATGTTCCATACCTTTCTCCACTGCATAGAGCTGAGAGGATGTCAGT GATCTTTGAATCAAAATGGCCTAAACCAGATGAGAGATCAAAGCATCCGGTTCGAACCACATTGCTTCGGGTGTTCTGGAGGGAAATAGCCTTCACTGCC TTCCTTGCTGTTATTAGGCTAAGTGTCGTGTTTGTAGGGCCTATTCTCTTACAGAGTTTTGTTGATTTCACAGCCGGGAAGGGAAGCTCTCCATATGAAG GATACTACCTAGTGTTGATTCTCCTATGTGCCAAATTTGTAGAAGTTTTGGCAACTCACCATTTCAACTTCAACTCTCAGAAGCTTGGAATGCTTATCAG ATGCACTCTCATCACTTCCTTGTACAAGAAGGGGCTGAGGCTAACATGTTCAGCTCGGCAGGACCATGGTGTTGGGCCTATTGTGAATTACATGGCTGTT GATGCTCAACAACTCTCTGATATGATGCTGCAGCTACATGCTGTGTGGATGATGCCATTTCAACTTGGTATTGGCTTAATATTGCTGTACAATTGTTTAG GTGCAGCAACAGTTACAGCTTTGATTGGTCTTCTTGGTATTATTGGGTTCATTTTGTTAAGTACTGGACAAAACAAAAGGTACCAATTTAATGCAATGAT AAAGCGTGACTCGAGAATGAAAGCTGTGAATGAGATGCTCAATTACATGCGTGTGATCAAGTTCCAGGCATGGGAAGAGCATTTCAACCGCAGAATTCAG GGTTTCCGTGAGTCAGAGTTCGGATGGTTTTCCAAGTTTATGTACTCAGTTTCTGGCAATATTGTTGTATTGTGGAGTGCACCGTTACTGATATCAACTC TCACATTTGGCACCGCCATTTTGCTTGGAGTTTCACTTGATGCTGGGACAGTTTTCACCACCACAACCGTGTTTAAGATCCTGCAGGAGCCTATTAGGAC CTTCCCACAGTCTATGATATCTCTTGCACAAGCAATGGTGTCACTGGGAAGGTTAGATAAGTACATGTCTAGCAGGGAATTATCAGAAGATTCAGTTGAG AGAGTGAGGGATTGTGACGGCCAAACTGCTGTGGAGGTCAAAGATGGTACCTTTAGTTGGGATGATGATTCTCAACAGCAGGACTTGAAACATATTAATT TGGATATCAATAAGGGTGAGCTTACTGCTATAGTTGGAACTGTAGGGTCAGGAAAGTCTTCCCTCCTTGCATCAATACTTGGTGAGATGCACAAAATTTA TGGAAAGGTTCGTGTTTGTGGGAGTACATCTTATGTTGCACAAACATCATGGATTCAAAATGGGACCATTGAAGAAAACATTCTCTTTGGATTGCCCATG AACAGACAGAAGTACAATGAAGTTGTCAGGGTTTGTTGCTTAGAGAAAGACCTGGAAATGATGGAGTATGGAGATCAGACAGAGATCGGAGAGCGTGGCA TCAATCTAAGTGGGGGCCAGAAGCAGCGTATACAACTTGCCAGGGCTGTATATCAAGACTGTGATATATATCTTCTCGACGATGTTTTCAGTGCTGTTGA TGCACATACCGGCTCTGAAATATTTAAGGAATGTGTGAGAGGAGCTCTAAAAGGCAAGACCATTATTCTTGTCACACACCAAGTAGACTTCCTACATAAT GTGGATCGTATTGTGGTGATGAAGGATGGAATGATTGCCCAATCAGGGAAGTACGATGATCTACTCCATTCCGGATTGGATTTTTCTGCTCTTGTAGCTG CGCATGAGACCTCTATGGAACTAGTAGAACAAGGTGCTGCAGGTGAAAATTTTGACAAACCAATTAAATCTCCAAAGGCAGCCCCTAATCATAGAGAAAC CAACGGCGAAAGCAATTCTGTTGACCAGCCCAAGTCTAACAAAGAAAATTCTAAACTCATCAAAGAAGAGGAGAGAGAAACTGGGCAAGTAAGCTTACAT ATCTATAAACTATACTGCACTGAGGCTTTTGGATGGTGGGGTGTTACAGCAGTGGTCCTTTTTTCTGTGTTGTGGCAAGCATCTATGATGGCAAGTGATT ATTGGCTGGCATATGAAACCTCAGCAACGCGTGCTGAACTGTTTGATCCTTCTGTGTTTATTTCCATCTACGCGATTATTGCTGTAGTTTCACTTATTTT GATCGTTCTAAGAACCTACTCTGTCACTATCGTGGGGCTAAAGACAGCACAGCTTTTCTTCTCACAAATTCTTAATAGCATCTTACATGCACCCATGTCT TTCTTCGACACAACTCCATCAGGGAGAATTCTAAGCAGGGCATCTACTGATCAGACCAATGTTGATATCTTCATCCCCCTGTTCATGAACTTTGCTTTGG CCATGTACATCACAGTAGTCAGCATCATCATAATCACATGTCAAAATTCTTGGCCAACAACTTTCTTGCTAATTCCTCTTATTTGGTTGAACGTTTGGTA CCGGCGCTACTATCTTGCTTCATCTCGTGAATTGACTCGTCTCGATTCAATCACAAAAGCACCTGTCATTCATCATTTCTCTGAAAGCATTTCTGGGGTC ATGACAATCCGTGCATTCAAAAAGCAGAAAGAATTTAGTGATGAAAATGTTAAACGGGTTAATGATAATTTGCGAATGGATTTCCACAACTTCAGTTCGA ATGAGTGGTTGGGTTTTCGCTTAGAATTGCTTGGAAGCTTAATGTTTTGCTTTTCTACTTTATTCATGATCATGTTACCCAGCAGCATCATAAAACCAGG TAAACTAACGATAAAAGGATTTATAAAACTGTTGCCCTGTCTTGATCCTTTGAAAAACATATCATGTTTTATCTTTCAAAGTAGTCCTCATCATACACTA GATCTTGGATAATGAATTGATTACTAGCATATATGGTGGAGCAGTGATATTACTATATTGCAGTAAAAAATTTATTGAGACAATAAATTGATTGTGCTGT TCTGCTTGATGTAGAAAATGTTGGTTTAGCACTCTCTTACGGAATATCCTTAAATTCGGTGCTGTTCTTTGCTGTATACATGAGCTGTTTCATTGAAAAC AAAATGGTTTCTGTTGAGAGGATAAAGCAGTTTACAAATATTCCATCGGAACCATCATGGAATCTTAAGGATCGTTTGCCTCCTCCGAATTGGCCTAGTC AAGGCAATGTAGATATCAAAGATTTGCAGGTCAGATACCGTCCGAACACTCCCCTAGTTCTTAAAGGCATCACTGTAAGCATTAGTGGAGGAGAAAAGAT TGGCGTTGTTGGTCGAACAGGGAGTGGAAAATCAACTCTGATTCAAGTTTTGTTTAGGCTTGTTGAACCTTCAGGAGGGAAAATCATCATTGATGGAATT GACATAACTGTCTTGGGGCTTCATGATCTTAGATCAAGGTTCGGTATCATTCCTCAGGAGCCTATCCTTTTTGAAGGAACTGTCAGAAGCAACATTGATC CGACCGGACAGTATACCGACGATGAAATATGGAAGAGCTTGGATCGATGTCAACTAAAAGAAGTCGTGGCTTCTAAGCCTGAAAAACTCGACTCTCTAGT GTTGGATAATGGAGAGAACTGGAGTGTGGGGCAGAGACAGTTGCTTTGTCTCGGACGGGTTATGCTCAAGCGAAGCCGGCTCTTGTTCTTGGATGAAGCA ACTGCTTCTGTTGATTCTCAAACGGATGGTGTAATTCAGAGGATCATTAGGGAAGACTTTGCAGCATGTACCATTATCAGCATTGCTCACAGAATACCCA CAGTCATGGACTGTGATAGAGTATTAGTTGTGGATGCAGGCATAGCCAAAGAATTTGATAAGCCCTCTATCTTGATTCAGAGGCCATCTCTTTTTGGAGC ATTAGTTCAAGAATATGCCAACCGATCAACTGGATTATAAGGAATCCTTTATGCTACTCTTAATGTATCTGGCTTAAATTCCGTAATCAAATTAGGATCA TAAAGATTGATAATCATTTTGATTGTACCGCAAGAAATCGAATTTTCTTTCTGTAGTCATAAGGTGAACTGTTTATCTTGGAAGTACTATGGGAAGGAAA TTATCAATCTTTTCTAAAGAGAATATTAGTGTATGGAGGGGCAGTCACTATGGCTAATCATTCCATTGTAATAAAATTTGGTAATGTGGTATTTTTGATT CCGAGAAAAAAAâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_76879; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_32596
| Blastp | ABC transporter C family member 4 from Arabidopsis with 65.32% of identity |
|---|---|
| Blastx | ABC transporter C family member 4 from Arabidopsis with 65.19% of identity |
| Eggnog | (ABC) transporter(COG1132) |
| Kegg | Link to kegg annotations (AT2G47800) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441762.1) |
| Pfam | ABC transporter transmembrane region (PF00664.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |