| Id Trinity | FTRINITY_DN58413_c0_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_32585 |
| Sequence | GAACAAGACAAACACTTGTTTTCAACAACAAAGGTGAAGCTTATTGAAGTTGCACACTTTCATACATGTCTTTCTCAACTACAACCTTTGTCACATTCCT CTCAGGGGAAACATTTACCTCAACTCTACCTCAATGGTTGAGCTTCATTTTCCTCTCTCCTTGTCCCCAAAGAGTTTTGTTGTCTGCACTCAATGTTCTA CTCTTACTCACCCTCTTTGTGATTTCAATTATAAAGCTTTGTTCTAAGTTCAAATCCAAATCCAGTGTTGGAAACACCAATGAGCTTAACCATATCAGAA ACAATGACACATCTTTTGTCAGAACAAGTTGTTGGTTTAAGCTAACTCTAACTGCAACTGTTGTTTTAATCATACTTTACATAGTTGCTTGTGTTATAGT GTTTACTAGTTCAAGTTCAACCAAGGTTGCATGGAACCAAATTGATGGGTTGTTTTGGTTAGTCCAGGTTATAACACAAGCAGTTATTGCAGTTTTGGTC ATCCATGAGAAAAAATTTGGAGCTGTTACTCACCCTTTTTGGCTTAGAATTTATTGGATTGCATATTTTATCATCATTTCTTTGTTCACAGCTTCTGGGA TTATGAGATTGGTATCTCTTGATGAAGCTGAAAACAAAGATTTGTTTATCTTTAAGGTGGATGACATTGTATCTTTCATTTCTCTCCCTGTGTCACTGTT TCTTCTTATTTTTGCTGTTAAAGGAACCACTGGCATTAGTATTGTGTCTAGTGAAGTAACAGAGCCACTTATTAGTGAGGAAATTAAGTTATATGGTGAT AATTTAAGCACAAGTGAGGTTACTGCTTTTGCTTCAGCTTCTTTTGTATCAAAGGCCTTTTGGATTTGGATAAATCCTTTGTTGAGTAAAGGGTACAAGT CACCTTTGAAAATTGATGAGGTTCCAACCCTTTCACCAGAGCATAGGGCTGAGAGAATGTCGTTACTATTTGAATCGAAATGGCCTAAATCGAATGAGAG ATCGGAGCATCCGGTTCGACTCACATTGCTTAGATGCTTCTGGAAGGATTTAGCAGTCACTGCTATCCTTGCTATCATTAGGCTATGTGTCATGTTTGTA GGACCAGTTCTCATACAAAGTTTTGTTGATGTCACCTCAGGGAAGGGTAGTTCCATATATGAAGGATACTTTCTTGTGTTGATTCTTTTCGTTTCCAAAT TCATCGAAGTCTTGACGACTCATCATTTCAACTTCAGTGCTCAGAAGCTTGGAATGCTTATCCGATGCACACTCCTTACTTCTTTGTATAAGAAAGGGTT AAGGCTTTCATGCTCTGGTAGGCAGGATCACGGTGTTGGGACTATTGTGAATTACATGGCTGTTGATACTCAACAACTCTCGGATATGATGCTGCAGTTA CATGCCGTGTGGATGATGCCAGTTCAACTTGGTATTGGCTTATTTCTGCTTTACAATTCTCTAGGTGCTTCAGCAGTCACAGCATTGGTTGGACTTATTG GTATTCTTATTTTCGTTGTGATTGGTACGAAAAGAAACAACACTTTCCAATTCATTGTGATGAAGAACCGTGACAAAAGAATGAAAGCTATGAACGAGAT GCTTAATTACATGCGTGTCATCAAGTTCCAAGCGTGGGAAGAACATTTCAATGCGAATATTATGCGTCACCGTGAGGCGGAATTTGCATCGCTTACCAAG TTCATGTTCTCTATTTGTGGCAATATGATTATTATGTGGAGCACGCCATTAGTGATATCAACTGTCACCTTTGGCACTGCGATTTTGCTGGGAGTTAAAC TGAATGCAGCCACTGTTTTCACCACAACAACCGTGTTTAAGATCTTGCAGGAGCCTATTAGGGCATTCCCACAGTCTATGATATCTCTTTCACAAGCAAT GGTATCATTGGGGAGGTTAGATAGGTACATGTTGAGCAAGGAATTGTCGAATGATTCTGTCGAGAGTGAGGAAGGGTACTTTGATCAAACTGCTGTGGAG GTCAAGGATGGGACATTCAGCTGGGATGACGATAGCTTGCAACGGGACTTGAAAAATATCAATTTGGTGATCAATAAGGGGGAGCTTGCAGCAATTGTTG GGACTGTTGGGTCAGGAAAGTCATCTCTCCTTGCGTCAATTCTTGGCGAAATGCGCAAAATCTCTGGAAAGGTTCGGGTTTTTGGTAGTACTGCTTACGT CGCACAAACATCGTGGATTCAAAATGGAACAATTGAAGAAAACATTCTCTTTGGTTTACCAATGGACAGAGATAAGTACAATGAAGTTGTCAGGGTTTGT TGCTTGGAGAAAGATTTTGAAATGATGGAGTATGGGGATCAGACAGAGATCGGAGAGCGTGGCATCAACCTAAGCGGAGGCCAGAAGCAGCGTATACAAC TTGCCAGGGCTGTATATCAGGACTGTGATATATATCTTCTCGATGATGTCTTCAGTGCTGTTGATGCTCATACTGGCTCTGAAATATTTAAGGAATGTGT GAGGGGAGCTCTAAAAGGCAAGACAGTTGTTCTTGTAACACACCAAGTAGATTTCCTACACAATGTGGATCTGATATTAGTGATGAAGGATGGGCTAATA GTTCAATCAGGGAAGTACAATGATATACTAGAGTCTGGAGTGGATTTTAAAGCTCTTGTATCAGCGCACGATACTTCTATGGAACTAGTAGAGCAAAGTG CGGTCGTTCCTGGTGAAAATTCGATCAAACCAACGAAATCTCTTGTGGCAGCTCCAAATCACAATGAAACCAATGGTGAGAGCAATTCCATTGAGCAGCC AAAGTCTGCCAAGGGAAGTTCTAAACTCATCAAAGAAGAGGAGAAGGAGACGGGCAAAGTGAGCTTACGTATGTATAAACTCTACTGCACTGAGGCTTTC GGGTGGTGGGGTATTACAGGAGTAATTGTTCTCTCTTTGTTATGGCAAGCATCTATGATGGCAAGTGATTATTGGCTGGCATATGAAACCTCCGAAAAGC GTGCTCAAGTGTTTAACCCTTCTATGTTTATTTCCATCTATGCAATCATTGCTGCTATTGGGATTATTATTGTAGTGGCTAGATCCTACTCCTTCACAAC CATTGGACTAAAGACAGCTCAAATTTTCTTCACACAAATTCTTCACAGCATCTTGCATGCACCCATGTCTTTCTTCGACACTACGCCATCCGGAAGAATT TTAAGTAGGGCATCCACTGATCAGACCAATGTTGATATCCTACTCCCATTGTTCTTGGGTATTATTATTGCCGTGTACATATCGCTGCTCGGCGTCCTCT TCGTGACCTGTCAGAACTCTTGGCCAACAGCGTTCTTGTTAATTCCTCTTGTTTGGTTGAATCTATGGTACCGGGGTTACTTTCTTTCTTCATCTCGTGA ATTAACTCGCATGGATTCAATTACCAAAGCACCTGTTATTCATCACTTCTCTGAAAGCATTTCAGGGGTTATGACAATCCGTGCATTCAGAAAGCAGAAA ATTTTTTGTCAAGAGAACATTAAGCGGGTGAATGCTAACTTGCGTATGGATTTCCACAATTATAGTTCCAACGAGTGGTTAGGATTACGCTTAGAATTGC TTGGAAGCTTAGTCTTTTGCATTTCTACTATGTTTATGATCGTCCTACCCAGCAGTATCATAAAGCCAGAAAATGTTGGTTTATCTCTTTCTTATGGGTT GTCCTTGAATGCTGTCTTGTTTTGGGCTGTATACATGAGCTGTTTCATTGAAAACAAAATGGTTTCTGTTGAGAGGATAAAGCAGTTTACAAATATTCCA TCGGAACCATCATGGAATCTTAAGGATCGTTTGCCTCCTCCGAATTGGCCTAGTCAAGGCAATGTAGATATCAAAGATTTGCAGGTCAGATACCGTCCGA ACACTCCCCTAGTTCTTAAAGGCATCACTGTAAGCATTAGTGGAGGAGAAAAGATTGGCGTTGTTGGTCGAACAGGGAGTGGAAAATCAACTCTGATTCA AGTTTTGTTTAGGCTTGTTGAACCTTCAGGAGGGAAAATCATCATTGATGGAATTGACATAACTGTCTTGGGGCTTCATGATCTTAGATCAAGGTTCGGT ATCATTCCTCAGGAGCCTATCCTTTTTGAAGGAACTGTCAGA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_76880; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_32585
| Blastp | ABC transporter C family member 4 from Arabidopsis with 65.59% of identity |
|---|---|
| Blastx | ABC transporter C family member 4 from Arabidopsis with 65.06% of identity |
| Eggnog | (ABC) transporter(COG1132) |
| Kegg | Link to kegg annotations (AT2G47800) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440868.1) |
| Pfam | ABC transporter transmembrane region (PF00664.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |