| Id Trinity | FTRINITY_DN58431_c0_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_30565 |
| Sequence | AAAAAAGTCAAAGTTTAAGCAAAGAAGAGAACAATTACATACTTGTATACTCTCCCCGACACATTTTACACCAACCCAATGGATTCTGCGTTAACCGTCA CCACGACGGCGCAGATGGTGCTTCTCAAGGCTCTCCACCGTCACTTCACCGCTCCTCCTCACACCCTCCGCCGCCGCCGCAACCTTAGACGCGCTCTTAC TTCTTACAACCGTTGCCACCGCGTTTCCGCCTCTTTTGCTTCTGCTCCACCGCCACGCTCACTTTGCCTTTTCGGTTCACTGTTCCGCCCAACGCCGTTC CATTTGCGGTGCGTTTCAAGCTCAGCTGCTTCATTTGCTCCTTCCGCCGGCGGAGGAAATAACGGTGCCGGAGCCAGCATAGGAGGTGGTGGTTATGGCG GTGAGTCTGGAGGTGGTAATCTGAAATTGGTTGTAGATGCGGGGGCTCAGGATCTTTCGGCACTTTCGTCTGATATTATTATTCTCGATGTTTCGGGAAT GTCATGTGGTGGATGCGCTGCAAATGTGAAAAGGATTCTGGAAAGTCAACCACAAGTGTCATCAGCTAGTGTAAATCTAACAACAGAGACAGCAATAGTT TGGCCTGTATCTGAAGCAAAGACTGCACCAAATTGGCAAAAGCAATTAGGGGAGGCACTCGCAGAGCATTTAACTGGCTGTGGTTTTAATTCTAGCCTTC GAGATTCAGTGCGAGACAATTTCCTCCAAATTTTTCAAAGGAAGATTGAGGAAAAGCGTAAACAATTAAGAGAAAGTGGTCGCGAGCTAGCTGTTTCTTG GGCCCTATGTGCTGTCTGTCTTGTTGGCCATCTCTCTCATTTCTGTGCAGCAAAAGCACCATGGGTCCATGCATTTCATTCCACTGGATTTCATCTGTCT TTGTCTTTGTTTACGTTGCTTGGTCCTGGCCGTCAACTTATCCTTGATGGTTTGAAAAGTCTTCTTAAAAGGGCACCAAACATGAACACTTTAGTTGCTC TTGGGGCTCTATCTTCATTTACAGTCAGTTCATTTGCTGCCTTTCTGCCAAAATTGGGTTGGAAGGCTTTCTTCGAAGAACCAATTATGCTAATTGCATT TGTCTTGTTAGGAAGGAATCTTGAACAGAGAGCTAAAATTAAAGCAACCAGTGATATGACAGGACTTCTTAGTATGCTTCCATCAAAAGCTCGCCTTCTA GTTAACAATGGGGAATCAGAAGTTGGCACAATTGTTGAAGTTCCATCGGACAGTCTTTCTGTTGGAGATCAGATTATTGTGTTACCTGGAGACCGTATTC CAGCAGATGGAGTTGTCCGAGCTGGTAGAAGCACTGTAGATGAATCAAGTTTCACTGGGGAGCCACTTCCTGTAACAAAACTACCCGGGAGTGAGGTTGC AGCTGGAAGTATAAATCTGAATGGAACTCTTACAATGGAAGTGCGGAGACCAGGTGGTGAAACTGCCATGGGGGACATTGTCCGTCTAGTTGAGGAAGCA CAGAGTAGGGAAACTCCAGTACAACGGTTGGCTGACAAGGTAGCTGGACACTTCACTTATGGAGTGATGGCAGTCTCTTTTACCACATTTACATTCTGGA GTCTGTTTGGCACACACATTTTACCCGCTTCTCTGTACCAAGGAAGTGCTGTTTCACTGGCTTTGCAGCTTGCTTGCAGTGTTCTGGTTATTGCTTGTCC ATGTGCACTTGGGTTAGCCACACCTACTGCCGTGCTGGTTGGAACTTCTTTGGGAGCTACAAAAGGATTACTTTTGCGTGGTGGAAACATTTTAGAGAAG TTTGCCATGGTAAAAACTGTTGTGTTTGATAAAACAGGGACCCTGACGGTTGGTAGACCTGTTGTAACAAAGATTCTCTCTCCTACATGCAGACAAAATG CAAATTCAAGTCAAACTGAAGAAACTACTTGGTCTGATGTTGAAATCCTGAGGTTAGCAGCTGCAGTAGAATCAAGTTCAGTACATCCAGTTGGAAAAGC GATTGTTGATGCTGCTCAGGAACTTAATTGTCATAATGCCAAGGTAGCAGATGGTTCATTCCTGGAAGAACCTGGATCTGGTGCAGTTGCAACCATTGAT AACAAAAAGGTTTCTGTTGGGACATGGGAATGGATCACCAGGTACTCAAGTATTTAATCCTTTTATCATAGTTTGAAGATACAAAGGATAGGATGTACCT CAATATTGTTAACATTTCTTACTAACTTATTGTTAAGGGTTTATTACTTGCAATTGATTTCAAGCTCATCAGTGTGTTTATTTCTTGGTGAATATTCCAT TTTGTTTATAAATTTCAAACCATCAGCAGATCATTTCTTTTGTTTGCAGGCATGGAATTAAAGGCAGTATCCAGCAAGAAGTGGAGGAGTGTAAAAACCA ATCTGTTGTCTATGTTGGAGTTAATGATACTCTAGCTGGCCTAATTTATACTGAAGATGAGATAAGGGAAGATGCAAGACATGTTGTTGACACATTGTCT AAGCAAAATATTGATGTATACATGCTGTCTGGAGACAAAAGGAATGCAGCTGAATATGTTGCATCTCGTGTTGGAATTCCAAAAGAGAAGGTGCTATCTG GAGTGAAACCAAATGAGAAAAAGAAGTTCATAAATGAGCTACAGAAGGATCAGAACATTGTAGCCATGGTTGGTGATGGAATTAATGATGCAGCTGCTCT GGCTTCTTCACATATTGGCATTGCATTAGGTGGAGGTGTTGGGGCTGCTAGTGAGGTGTCTTCAATTGTATTGATGCGCAACCAGCTCTCACAGCTACTT GATGCTTTGGAGCTTAGCAGGCTAACCATGAATACTGTAAAACAAAATCTTTGGTGGGCTTTCATTTACAACATCGTAGGGATTCCAATTGCAGCTGGAG TTTTATTTCCTGTAAATGGGACCATGCTGACTCCATCAATTGCAGGTGCTCTAATGGGGTTGAGTTCCATTGGTGTAATGTCTAACTCATTGCTTTTAAG ATTCAAATTTTCCTCAAAGCAGAAACAAATGCATGCCACATTCCCAAATATCAAAATCAAGGTGGATTCTGATTTGCCACGCCGAAACCAGAAAATAAAA TATTCAAGTTAGATGTTAGATGGAGGCACATAATAACACAACATAAGTCAAGTACACCTTGGCAGGAGTATGAACTTCAAAGAGAAATTTAATGTATAGA AATCAAAGAATCACACTATATGTGATGGGGAACTTCAAAGAGGAATTGTATGAACTTTATTTTTTCCGAGAACTCCATATTTCCACTATTAATTTGTGTC TAGTTCTTTCAACTTCACTGCATTGTGTATTGAAAATTTTATGTGGGTTTTACTCGCTTGAAAAATATGTATCCAGACTGTAGCTTTTTATATTTACAAA CAAGGTTATTTATAAATCATTTGTCAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_76999; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_30565
| Blastp | Copper-transporting ATPase PAA1, chloroplastic from Arabidopsis with 72.5% of identity |
|---|---|
| Blastx | Copper-transporting ATPase PAA1, chloroplastic from Arabidopsis with 70.56% of identity |
| Eggnog | p-type ATPase(COG2217) |
| Kegg | Link to kegg annotations (AT4G33520) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461306.1) |
| Pfam | Heavy-metal-associated domain (PF00403.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |