Ll_transcript_30160

• Id Trinity: FTRINITY_DN58434_c0_g2_i3
• Name Transcript: Ll_transcript_30160
• Sequence: CACAGATTTCAAATCCGAAAATATCTATCGTTGTGTTAGAATTTGCAGCACCATAATAACGACTAAAAAGTTGACTTAAACCATAATATCTAATAGTACT TTCCTATATCAAAATTAAACTGAATTTCATTCTTTCTGAAACCCTAGAACTTCGTATCCATGGATATCAGGTTCCCGTTCTCTCCAGCGGAGGTCGCCAA AGTCCGAATGGTTCAGTTCGGAATACTCAGCCCCGACGAAATTAGACAGATGTCTGTGGTGCAAATTGAGCACGGTGAAACCACGGAGAGGGGAAAGCCT AAGGTTGGAGGATTAAGCGATCCTCGCCTTGGAACTATTGATAGGAAAATGAAGTGTGAGACTTGTACAGCAAATATGGCTGAGTGTCCGGGTCATTTTG GTCATTTGGAGCTTGCTAAACCTATGTTTCATATTGGCTTCTTGAAAACTGTTCTCAATATAATGCGTTGCGTTTGCTTCAATTGCTCAAAAATTCTTGC AGATGAGAATGATCATAAGTTTAAACAAGCTTTGAGGATTAGGAATCCCAAAAATAGGCTTAAGAAAATTTTGGAGGCTTGCAAAAACAAAAGCAAGTGT GAAGGTGGTGATGACATTGACATTGCTGCTCAAGACTATGAGGAACCGGTTAAAAAGAGTCGTGGTGGTTGTGGTGCTCAGCAACCAAAGATTACTATTG ATGGGATGAAAATGATTGCGGAGTACAAAGCTCAGAGAAAGAAAGCTGATGACCAGGAACAACTTCCTGAACCCGTAGAAAGGAAACAGACTCTTTCTGC AGAAAGGGTTCTTGGTGTGTTGAAAAGGATAAGTGACGAGGACTGTCAACTGTTAGGCTTAAATCCTAAGTATGCTCGCCCTGATTGGATGATTTTACAA GTTCTTCCAATTCCTCCGCCACCTGTGAGACCTTCTGTAATGATGGACACATCCTCCAGGAGTGAGGATGACTTAACTCATCAGTTGGCCATGATCATCA GGCACAATGAGAATCTTAAGAGACAGGAGAGGAACGGATCACCTGCGCATATTATTTCAGAGTTTGCTCAGTTGTTGCAGTTTCATATAGCCACATACTT CGATAATGAGTTGCCTGGATTGCCGAGGGCTACTCAAAGATCAGGAAGGCCTATCAAATCAATATGTAGCAGGCTTAAGGCAAAAGAAGGTAGAATTAGA GGTAATTTGATGGGGAAGAGAGTTGATTTCTCCGCACGAACAGTAATTACGCCAGACCCAACCATCAACATCGATCAATTGGGAGTACCATGGAGTATTG CTTTGAATCTTACTTACCCCGAGACTGTTACTCCGTATAACATTGAAAGGCTGAAGGAACTTGTTGAGTATGGACCCCATCCTCCACCTGGAAAAACTGG TGCCAAGTATATCATTCGTGATGATGGGCAAAGGCTTGATCTCAGATATTTAAAGAAAAGTAGCGATCACCATTTGGAGCTTGGATACAAGGTGGAGCGT CATTTGAATGATGGGGACTTTGTTCTATTCAATCGCCAGCCCAGTCTTCATAAAATGTCTATCATGGGTCATAGAATCAAAATCATGCCTTATTCTACTT TTCGTCTTAACTTGTCAGTTACTTCACCATATAATGCTGATTTTGATGGGGATGAAATGAATATGCATGTTCCTCAGTCATTTGAAACTAGAGCAGAGGT GTTGGAGCTGATGATGGTGCCTAAATGCATTGTGTCACCTCAAGCAAACAGGCCTGTAATGGGAATTGTCCAAGATTCGCTTTTGGGATGCAGAAAAATC ACCAAGAGAGATACCTTCATCCCAAAGGATGTGTTTATGAACATTTTGATGTGGTGGGAAGATTTTGATGGGAAAGTTCCTGCTCCTGCAATATTAAAGC CAGAGCCGTTGTGGACCGGGAAACAAGTTTTCAATCTCATCATTCCTAAAGCAATAAATCTGATTAGATATTCTAGCTGGCACAATGAGAGTGAAAGGGG ATCCATAACCCCTGGGGATACCATGGTCAGAATTGAAAAAGGGGAACTACTTACAGGGACACTTTGCAAAAAGACACTTGGAGCATCTTCTGGAAGTCTC ATTCATGTCATCTGGGAAGAGGTTGGACCGGATGCAGCTCGTAAATTTCTAGGTCATACTCAGTGGCTTGTGAACTATTGGCTTTTGCAGCATGCGTTTA GCATGGGGATTGGTGATACAATTGCTGATGCGTCAACTATGGAGGTTATTAATCAGACTATTTCACAAGCTAAGGAGAAAGTGAAACAACTCATCAGGGA TGCTCAAGAAAAGAAGTTGGAGGCTGAACCGGGTCGGACAATGATGGATTCATTTGAAAATAGAGTGAACCAGACATTGAATAGAGCTCGTGATGATGCT GGAAATAGTGCACAGAAAAGTTTATCTGAGAGCAATAATCTAAAAGCAATGGTTACAGCTGGTTCCAAAGGAAGTTTTATCAACATCTCTCAGATGACGG CTTGTGTGGGCCAACAAAATGTCGAGGGTAAGCGAATTCCATATGGGTTCATAGATCGGACGTTGCCCCACTTTACAAAAGATGATTATGGGCCTGAAAG TCGTGGCTTTGTGGAAAACTCGTATCTCCGAGGACTGACCCCACAAGAGTTCTTTTTCCATGCCATGGGTGGTAGGGAAGGTCTTATTGATACTGCAGTG AAGACTTCTGAAACTGGGTACATTCAGAGGCGACTAGTGAAGGCTATGGAGGATATCATGTGTAAATATGATGGGACAGTTAGGAACTCTTTGGGAGATG TTATACAATTTCTATATGGGGAAGACGGAATGGATGCAGTTTGGATAGAAACACAGAAGCTAGATTCCCTAAAAATGAAGAAAACAGAATTTGATAGGGT TTTTCGGCACAACTTTGATGATGAAAACTGGAAACCTAACTACATGCTTGAAGAGTCTGTAGAAGATTTGAAAAGCTTCAAAGAGTTTCGTAGTGTGTTT GAGGCGGAACTTCACAAGCTTGAAACTGACAGATTTCAACTTGCAACAGAGATAGCCACTACTGGTGACAGTTCTCTGCCACTACCTGTTAACCTTAAGA GGCTTATCTGGAATGCTCAAAAGACCTTCAAGGTTGACTTCCGAAGGACTTCTGATATTCATCCTATGGAAATTGTGGATGCAATTGATAAGCTCCAGGA GAGACTTAAGGTTGTTCCTGGTGATGATCTTTTGAGTCAAGAAGCTCAGAAAAATGCAACTCTTCTGTTCAATATTCTGCTTCGTAGCACTTTTGCCAGT AAAAGGGTCCTGGATGAATACAGGCTTTCCCGTGAGGCATTTGAATGGGTTGTGGGAGAAATAGAATCAAGGTTCCTGCAATCACAAGTAGCCTCTGGGG AGATGATTGGTTGTGTAGCAGCACAATCAATCGGTGAGCCTGCCACCCAAATGACTCTCAACACCTTTCACTATGCTGGTGTCAGTGCTAAAAATGTTAC ACTTGGTGTTCCAAGGTTACGAGAAATCATTAATGTGGCAAAGAGAATCAAAACACCTTCTCTGTCTGTGTACTTGAAACCTGAGGTTGGTAAGACCAAA GAGAGGGCCAAGAATGTGCAGTGTGCTTTAGAATATACAACTCTTAGGAGTGTAACTCAGGCCACAGAGGTATGGTATGATCCTGACCCAATGGGTACAA TAATTGAAGAGGATGTTGACTTCGTGAAATCCTACTATGAAATGCCTGATGAAGAAGTTGCTCTTGACAAAATCTCGCCTTGGTTGCTTCGCATAGAACT TAATCGTGAAATGATGGTGGATAAGAAGTTGAGTATGGCTGACATTGCTGAAAAGATTAACCTTGAGTTTGATGATGATCTGACCTGCATATTTAATGAT GACAATGCTGAGAAACTTATTCTTCGGATCCGTATTATGAATGATGAAGCCCCCAAAGGAGAGATTCAGGATGAATCAGCTGAAGATGACGTTTTCTTAA AGAAAATAGAAGGCAACATGTTGACTGAAATGACCTTGCGAGGTATCCCAGACATCAACAAAGTTTTTATAAAAAATACTAAAGTTCAGAAGTTTGATGA GATTGAAGGTTTTAAGCCTCATGATGAGTGGATGCTTGATACTGAAGGTGTCAACCTTTTAGCTGTGATGTGCCATGACGAAGTCGATGCAACCAGGACC ACGAGCAATCATTTGATTGAAGTTATTGAAGTTCTTGGTATCGAGGCAGTTCGTCGGGCTCTTCTGGATGAATTACGTGTTGTTATTTCTTTTGATGGTT CTTATGTCAATTACAGGCATCTGGCCATCCTTTGTGATACCATGACTTACCGTGGTCATTTGATGGCAATTACACGTCATGGTTTCAACAGGAATGATAC TGGGCCAATGATGAGATGCTCGTTTGAAGAGACCGTCGATATTCTTGTTGATGCTGCAGTATATGCTGAGACTGATTACTTGAGGGGTGTTACTGAAAAT ATTATGTTAGGTCAGCTTGCCCCC
• Tissue: flowers
• Gene name: LI_gene_77019;
• Additional information: details;

Expression of Ll_transcript_30160

FPKM

• FPAB: 7.7
• FPNAB: 5.1
• LF1: 7.2
• LF2: 6.1
• LF3: 7.1
• LF4: 4.5
• UF1: 3.9
• UF2: 7.1
• UF3: 7.3
• UF4: 4.9

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_30160

• Blastp: DNA-directed RNA polymerase II subunit 1 from Arabidopsis with 87.02% of identity
• Blastx: DNA-directed RNA polymerase II subunit 1 from Arabidopsis with 87.02% of identity
• Eggnog: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)(COG0086)
• Kegg: Link to kegg annotations (AT4G35800)
• CantataDB: Link to cantataDB annotations (CNT0002743)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455343.1)
• Pfam: RNA polymerase Rpb1, domain 1 (PF04997.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;