Ll_transcript_30162

Id TrinityFTRINITY_DN58434_c0_g2_i4
Name TranscriptLl_transcript_30162
SequenceCACAGATTTCAAATCCGAAAATATCTATCGTTGTGTTAGAATTTGCAGCACCATAATAACGACTAAAAAGTTGACTTAAACCATAATATCTAATAGTACT TTCCTATATCAAAATTAAACTGAATTTCATTCTTTCTGAAACCCTAGAACTTCGTATCCATGGATATCAGGTTCCCGTTCTCTCCAGCGGAGGTCGCCAA AGTCCGAATGGTTCAGTTCGGAATACTCAGCCCCGACGAAATTAGACAGATGTCTGTGGTGCAAATTGAGCACGGTGAAACCACGGAGAGGGGAAAGCCT AAGGTTGGAGGATTAAGCGATCCTCGCCTTGGAACTATTGATAGGAAAATGAAGTGTGAGACTTGTACAGCAAATATGGCTGAGTGTCCGGGTCATTTTG GTCATTTGGAGCTTGCTAAACCTATGTTTCATATTGGCTTCTTGAAAACTGTTCTCAATATAATGCGTTGCGTTTGCTTCAATTGCTCAAAAATTCTTGC AGATGAGAATGATCATAAGTTTAAACAAGCTTTGAGGATTAGGAATCCCAAAAATAGGCTTAAGAAAATTTTGGAGGCTTGCAAAAACAAAAGCAAGTGT GAAGGTGGTGATGACATTGACATTGCTGCTCAAGACTATGAGGAACCGGTTAAAAAGAGTCGTGGTGGTTGTGGTGCTCAGCAACCAAAGATTACTATTG ATGGGATGAAAATGATTGCGGAGTACAAAGCTCAGAGAAAGAAAGCTGATGACCAGGAACAACTTCCTGAACCCGTAGAAAGGAAACAGACTCTTTCTGC AGAAAGGGTTCTTGGTGTGTTGAAAAGGATAAGTGACGAGGACTGTCAACTGTTAGGCTTAAATCCTAAGTATGCTCGCCCTGATTGGATGATTTTACAA GTTCTTCCAATTCCTCCGCCACCTGTGAGACCTTCTGTAATGATGGACACATCCTCCAGGAGTGAGGATGACTTAACTCATCAGTTGGCCATGATCATCA GGCACAATGAGAATCTTAAGAGACAGGAGAGGAACGGATCACCTGCGCATATTATTTCAGAGTTTGCTCAGTTGTTGCAGTTTCATATAGCCACATACTT CGATAATGAGTTGCCTGGATTGCCGAGGGCTACTCAAAGATCAGGAAGGCCTATCAAATCAATATGTAGCAGGCTTAAGGCAAAAGAAGGTAGAATTAGA GGTAATTTGATGGGGAAGAGAGTTGATTTCTCCGCACGAACAGTAATTACGCCAGACCCAACCATCAACATCGATCAATTGGGAGTACCATGGAGTATTG CTTTGAATCTTACTTACCCCGAGACTGTTACTCCGTATAACATTGAAAGGCTGAAGGAACTTGTTGAGTATGGACCCCATCCTCCACCTGGAAAAACTGG TGCCAAGTATATCATTCGTGATGATGGGCAAAGGCTTGATCTCAGATATTTAAAGAAAAGTAGCGATCACCATTTGGAGCTTGGATACAAGGTGGAGCGT CATTTGAATGATGGGGACTTTGTTCTATTCAATCGCCAGCCCAGTCTTCATAAAATGTCTATCATGGGTCATAGAATCAAAATCATGCCTTATTCTACTT TTCGTCTTAACTTGTCAGTTACTTCACCATATAATGCTGATTTTGATGGGGATGAAATGAATATGCATGTTCCTCAGTCATTTGAAACTAGAGCAGAGGT GTTGGAGCTGATGATGGTGCCTAAATGCATTGTGTCACCTCAAGCAAACAGGCCTGTAATGGGAATTGTCCAAGATTCGCTTTTGGGATGCAGAAAAATC ACCAAGAGAGATACCTTCATCCCAAAGGATGTGTTTATGAACATTTTGATGTGGTGGGAAGATTTTGATGGGAAAGTTCCTGCTCCTGCAATATTAAAGC CAGAGCCGTTGTGGACCGGGAAACAAGTTTTCAATCTCATCATTCCTAAAGCAATAAATCTTATTCGATATTCTAGCTGGCACAATGAGAGTGAGAGAGG GTCCATAACCCCTGGGGATACCGTGGTCAGAATTGAAAAAGGGGAAGTGCTTACTGGAACTCTTTGCAAAAAGACACTTGGAGCATCTAGTGGAAGTCTG ATTCACGTGATTTGGGAAGAGGTTGGCCCCGATGCAGCTCGTAAATTTCTTGGTCATACTCAGTGGCTTGTAAACTACTGGCTTTTGCAGCAAGCATTTA GCATTGGAATTGGTGATACAATTGCTGATGCGTCAACTATGGAGGTTATTAATCAGACTATTTCGCAAGCGAAGGAAAAAGTGAAACAGCTCATCAGGGA AGCTCAAGAAAAGAAGTTGGAGGCTGAACCTGGTCGGACAATGATGGATTCGTTCGAAAATAGAGTGAACCAGACACTAAATAAAGCTCGTGATGATGCT GGAAATAGTGCACAGAAAAGTTTATCTGAGAGCAATAATCTAAAAGCAATGGTTACAGCTGGTTCCAAAGGAAGTTTTATCAACATATCTCAAATGACAG CTTGTGTGGGCCAACAAAATGTGGAGGGTAAGCGAATTCCATACGGGTTCATAGACCGGACTTTGCCTCACTTTACAAAAGATGATTATGGGCCTGAAAG TCGTGGTTTTGTGGAGAACTCATATCTCCGTGGACTGACCCCTCAGGAGTTCTTTTTCCATGCCATGGGTGGTAGGGAAGGTCTTATTGATACTGCAGTG AAGACTTCTGAAACTGGGTACATTCAGAGGCGACTTGTGAAGGCTATGGAAGATATCATGTGTAAATATGATGGGACAGTTAGGAACTCTTTGGGAGATG TTATACAATTTCTATATGGAGAGGATGGAATGGATGCAGTTTGGATTGAAACACAGAAGCTAGATTCCCTAAAAATGAAAAAAGTAGAATTTGATAGGGT TTTTAAGTATGAGTTTGATGATGAAAACTGGAAGCCTAGTTACATGCTTGAAGAGCCTGTAGAAGACTTGAAAACCATCAGAGAGTTTCGCAGTGTGTTT GAGGCTGAATTTCAAAAGCTTGAAGCTGACAGATTTCAACTTGCAACTGAGATAGCCACTACTGGTGATAATTCACTGCCACTACCGGTTAACCTTAAGA GGCTTATCTGGAATGCTCAGAAGACTTTTAAGGTTGACTTCCGAAGGCCTTCAGATATGCATCCCATGGAAATTGTGGAAGCTATTGATAAGCTCCAGGA GAGACTTAAGGTTGTTCCTGGTGATGATGCTTTGAGTCAAGAAGCTCAGAAGAATGCCACTCTCCTGTTCAATATTTTGCTTCGCAGCACTTTTGCCAGT AAAAGGGTCTTGGAGGAATACAGGCTTTCTCGTGAGGCATTTCATTGGGTAGTGGGTGAAATAGAATCAAGGTTCCTGCAGTCACAAGTAGCCTCTGGGG AGATGATCGGTTGTGTAGCAGCTCAATCAATTGGTGAGCCTGCCACCCAGATGACTCTCAACACTTTTCACTACGCTGGTGTCAGTGCTAAGAATGTTAC ACTTGGTGTTCCAAGGTTACGAGAAATCATTAATGTGGCAAAGAGAATCAAAACACCTTCTCTGTCTGTGTTCTTGAAACCGGAGGTTGGTAAGACGAAG GAAAGGGCCAAGATTGTGCAGTGTGCTTTAGAATATACCACCCTTAGGAGTGTGACTCAGGCTACAGAGGTGTGGTATGATCCTGACCCAATGAGTACAA TAATTGAAGAGGATGTTGATTTTGTGAATTCCTACTATGAAATGCCTGATGAAGAAGTTGCACTTGAAAAAATCTCACCTTGGTTGCTTCGCATAGAACT AAATCGTGAAATGATGGTGGATAAGAAGTTGAGTATGGCTGACATTGCTGAGAAGATCAACCTTGAATTTGAAGACGATTTGACCTGCATATTTAATGAT GACAATGCTGAAAAGCTCATTCTTCGTATCCGTATTATGAACGATGAAGCCCCCAAGGGAGAAATTCAGGATGAATCTGCTGAAGATGATGTTTTCTTGA AGAAAATAGAAAGCAACATGCTGACTGAAATGACCTTGCGAGGTATCCCAGACATCAACAAAGTTTTTATAAAGAATACTAAAGTTCAGAAATTCGATAA GAATGAAGGTTTTAAGCCTCATGAAGAGTGGATGCTTGATACTGAAGGTGTCAACCTTTTAGCTGTAATGTGTCATGAAGATGTTGATGCAACCAGGTCC ACAAGCAACCATTTGATTGAAGTTATTGAAGTTCTTGGTATTGAGGCAGTCCGTCGGGCTCTTTTGGATGAATTACGTGTTGTCATTTCCTTTGATGGTT CTTATGTCAATTATAGGCATCTGGCTATTCTCTGTGATACCATGACTTACCGGGGTCATTTGATGGCAATTACACGTCATGGTATCAACAGGAATGATAC TGGACCAATGATGAGATGCTCATTTGAAGAGACGGTTGATATTCTCCTTGATGCTGCAGTTTATGCTGAGACTGATTACTTGAGGGGTGTCACTGAAAAT ATTATGCTGGGGCAGCTTGCCCCCATTGGCACCGGAGAATGTGCCCTGTACCTGAATGATGATATGCTGAAGAATGCTATTGAGCTCCAGCTACCCAGTT ACATGGACGGTCTTGATTTTGGGATGACGCCTGCTCGATCACCTATTTCTGGAACTCCTTATCATGAAGGATTGATGTCTCCAAGTTATCTGTTGAGCCC AAATCTTCGGCTGTCACCTACTACAGATGCCCAGTTTTCTCCTTATGTTGGTGGGATGGCATTTTCACCTGCTTCGTCACCCGGTTACAGCCCTTCATCA CCCGGTTACAGCCCTTCATCACCCGGTTACAGCCCTACATCACCCGGTTACAGCCCTACATCACCTGGATACAGCCCCACATCACCTGGGTACAGCCCCA CCTCTCCGACTTACAGCCCTAGCTCTCCAGGGTATAGTCCCACAAGTCCAGCTTATTCACCTACATCCCCTAGCTACAGCCCCACATCCCCTAGCTACAG CCCCACATCCCCAAGCTACAGTCCCACATCCCCAAGCTACAGCCCCACATCACCCAGCTACAGCCCCACATCACCCAGCTACAGCCCCACATCCCCAGCA TACAGTCCTACCTCACCTTCATACAGCCCGACATCTCCTTCATACAGCCCTACATCTCCTTCATACAGCCCTACATCGCCTTCATACAGCCCTACATCAC CATCATACAGCCCTACATCGCCTTCTTATAGCCCGACCTCACCTGCATACTCTCCTACTTCACCTGGCTATAGCCCTACCTCCCCTAGCTATAGTCCTAC TTCACCTAGCTACAACCAACAGTCAGCTAGGTATAGTCCTTCATTGGCATATTCACCTAGCAGCCCAAGATTGTCTCCATCAAGTCCATATAGTCCTACA TCTCCTAACTACAGCCCGACATCTCCATCATACTCACCAACGTCTCCATCTTATTCACCATCAAGCCCAACATATAGTCCCAGCAGCCCGTATAATTCTG GTGTAAGCCCAGACTATAGCCCAAGTTCACCAAATTTTAGTCCTAGTACAGGATACTCACCAAGTCAACCTGGCTACTCCCCATCGTCAACCAGCCAGTA CACTCCACAGACGAGTGACAAGGATGTTAAGGGTGCTCGCTGAGGTAAACTGAAAGTTTTACTACTGCAAAGATTTGACTTTAAGTTTTTAATCTCACCT AATGGAACATTTAACAGTTTTGATGATTCTGAACTTTTTCACTAGAACTTGATTATCAAAACCTCTTGGTTCTCTTCGTTATCTTCTCCTCCATTACTTC GAATTTATAAAAAGAATCTATTTGGTGTGAACACATTTAGGAAGAGTTTGTAAATGATTTCCATCAATTGGAAGAGTCAACAGAGCATTTCCTTGATTTC AAATTAAATCTTCAATTCTGGATTTGTTGCTAGTAATTGGAGGGGAGAAGATGATTTAGATATTCGACTTTACATAGTTCTTGATATGGCTGTAAGCTAG TGATTTTTCTCTCCAACCTCTTTGGCCTTTGAAAAAGTTAACTGTATTTTGCTTATGGCATGTAAAGCCTGTTTTTAATTTATCTTTGGAAAGTATCTCA AGACTGATGTGAATGTTCAGGACAACTTGAGTCAACGGTGGAGGCCGGAGAAGATGCTGGAATGAGAGATTGAATTGTTCGAATGTCGTAGTTTGCACTG TATTGTTGTATCATATATTCATATTACCTATGCTTTAGGACTCGCCTGTAGACAATAACGTCGAAGCAGTTCGCAATCTCTGATCTGCACATTCTGCTTC GTTACTTGAACTATTGTTACAATACTTTGTATGTAAAACTCTAGAGGATGATCCTTGTGGTAACAAAAAAA BLAST
Tissueflowers
Gene nameLI_gene_77019; 
Additional informationdetails; 

Expression of Ll_transcript_30162

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_30162
BlastpDNA-directed RNA polymerase II subunit 1 from Arabidopsis with 81.76% of identity
BlastxDNA-directed RNA polymerase II subunit 1 from Arabidopsis with 87.5% of identity
EggnogDNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)(COG0086)
KeggLink to kegg annotations (AT4G35800)
CantataDBLink to cantataDB annotations (CNT0002743)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019421112.1)
PfamRNA polymerase Rpb1, domain 1 (PF04997.11)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;