Id Trinity | FTRINITY_DN58437_c0_g4_i2 |
---|---|
Name Transcript | Ll_transcript_30651 |
Sequence | ATCGGAATCACCCGTCCCACAATTTAATGTCTCACGGCGTCAAGTTGCCACCTACTTGAAAATAAAAATAAAAAATATTATTTTTATATTATTTGATGAA ACATTGGTTCGGACATAGATATCTAAAAAATTGAAGTTGAGTATTTAATACAAGTTGATTATATTTCTCATAATTTCAGCTCCATTTTCTCTCTCTATTC CTCTCTACTCTTCCCAACTCTAATACCTGGGATCTATCTTCCTTGTTCTTCATTACTTTCAGCTTCTCATCTTTCTATACCATAAGGTAAAGCTTCCTTA TTTGATGCCCTTTTGCTTTTTGCAAATACACTACTTTCCTTTTTTGATCTGGGTACCATCAAAATCAGATATTTCCACCAAATTTAGTATCTTTCTTACA TTTTTCCCATCTCATACAGTAAAAACAAAAGACTCTATGTTCTGATTTTTTTTTATTTTTGTGTCATGGGGAAAATTAGATCTTCACACCAAAGTTAGTA TCTTTCTTTGTTTTTCCTTTCTGGGCTTTTAATCTATTTTAGTTCCATACAATAACAAGAAGAGGGTTTGTGTTTTTGAGTTTTGACTTGTGTATCATGG AGAAGAACAACAACATAAGTCACTGTTTTTGTGTTGGTTCATTATTTGTGTTCTTGTTATCAATTGAGCTTATCCTAGCAGCAGATTTTAAGCCAACAGA TAAAATCTTACTGAGCTGTGGTGGTCCTCCATCTAGCACTGATGCTGATGGAAGGGATTGGACCACTGATATTGGTTCCAAGTTTGAATCATCTTCAGCC GCCGGAAAAAACTCCACAACATCTCCGGCCGCCACTCAAGACCCTGCAGTCCCTGAGGTGCCATACATGACAGCCCGTGTGTTCCACTCACAGTTCACCT ATTCGATTCCGGTGGCCTCCGGTTGGAAATTCCTCAGGCTGTACTTTTACCCGGCTTCATACTCCAGCCTCAATGCTTCGAACGCTTTGTTCAGTGTCAC AGCGCAGCAATCATACACGTTGTTGAGGAACTTTAGCGTGGAGCAAACCACGTTGGCCTTGAATTATGCCTACATTGTGAAGGAGTATGTGATCCATGTT GAGGGGGAAACATTGAATGTGACTTTTACTCCATCTGCGAATGCATCGAATTCGTATGCATTTGTGAATGGGATTGAGGTGGTGTCTATGCCGGATATTT ACACTTCTAGTGATGGTAGCACTATGATTGTTGCTACAAATTCTCCTTTTACTACTGATAACAGCACCATACTTGAGAATGTTTACAGGTTAAATGTCGG GGGGAATGATATCTCACCGTCTCATGATACCGGTCTTTTTAGGTCATGGTCTGATGATATGCCTTACCTATTTGGTGCTGCATTTGGAGTGACCGAGCCG GCTGATCCATCTGTGAAGATCGAGTACCCTCCAGGCACACCGAGTTATATTGCTCCGGTTGATGTTTACACTACAGCCAGAACAATGGGCCCAAATCCCC AAATAAACTTAAATTACAACCTGACTTGGCTTTTCACTGTTGATTCAGGGTTTTCCTATCTTGTGAGGCTCCATTTCTGCGAGGGCTCGACAAATATAAC CAAGATCAATCAGAGGGTGTTCGATATTTTCCTAAATAATCAAACTGCTCAGCCTGGTGGTGCTGATGTTATAGCCTGGGCAGAGGGATCTGGGCTTGCA CATAATAATGGTGTTCCAGTGCATAAAGATTATGTTGTATTTGTTCCTAATGGTGAACCACGGCAGGATTTGTTGCTTGCATTGAATCCGGATCAATCTT CGAAGCCACAGTATTATGATGCAATCTTGAATGGAGTGGAGATATTCAAGATTAATGATACTACTGGTAGTCTTGCTGGGACAAATCCTATTGCTCCTCC TTTGCAAGAAAAGGTTGACCCTTCATTGGCTCGGCCGCATCCTCATGCTAATTCGAAGAATCAGACTGGAGTGGTTGCTGGAGGTGTCGGTGGAATAGTT GTTTTATTACTGCTTGTCATTGGAGTATTCACTTTTGCGCGTCGCCGTAGGCATGGTAAAGAGTCTAGTGCGATTGAGGGTCCATCTGGCTGGCTTCCAC TTTCTCTCTATGGTAATTCACACTCTGCAGGTTCTGCCAAGACTAACACCACAGGAAGTTATGCATCTTCAATCCCATCAAACCTTTGCCGACACTTCTC ATTTGCTGAAATCAAAGCTGCCACAAAAAAATTTGATGATGCTTTAATTCTCGGTGTGGGGGGATTTGGTAAGGTTTACAAAGGTGAAATCGATGGTGGA GCAACCAAAGTTGCAATTAAGCGTGGGAATCCACTATCCGACCAAGGGGTGCATGAGTTCCAAACTGAGATTGAAATGCTCTCAAAGCTTCGCCACCGTC ACCTTGTTTCACTGATCGGCTACTGCGAAGAGAACACTGAGATGATTCTTGTTTATGATCACATGGCCTATGGAACACTCAGGGAGCATCTATACAAGAC TCAGAAACCACCACTGCCGTGGAAACAAAGGCTTGAAATATGCATTGGAGCAGCTCGTGGTTTGCATTATCTACACACTGGTGCTAAACACACTATCATC CATCGCGACGTGAAGACAACAAACATTTTACTGGATGAGAAGTGGGTGGCTAAGGTTTCTGATTTCGGATTGTCGAAAACAGGTCCAACATTGGATAACA CACATGTGAGCACCGTGGTGAAGGGTAGTTTCGGGTACTTGGATCCTGAATACTTCAGGAGGCAGCAACTTACTGATAAGTCTGATGTTTACTCTTTTGG TGTGGTTCTGTTTGAGATATTGTGTGCTCGTCCTGCTTTGAATCCAACACTTGCTAAGGAGCAAGTGAGTCTTGCTGAGTGGGCACCACATTGTTATAAA AAGGGTATTCTTGATCAAATCATGGATCCTTTTCTCAAGGGCAAGATAGCACCAGAATGCTTTAAGAAGTTTGCTGAGACCGCGATGAAGTGCGTTTCCG ATCAGGGAATTGAAAGGCCTTCCATGGGTGATGTGTTGTGGAACCTTGAGTTTGCATTGCAGCTGCAAGAAAGTGCCGAAGAGAGTGGTAACGATTTCGG TGGAAAAGTGATTCTGAATGAAGAGGAGACATTGTTTAGTGGTGATGATTGTAAAGGGAAGAAGGAGAGTGATGCAAGTAATGTTAGTGATTCAAGAAGC AGTGGTATGAGTATGAGCATTGGTGGTAGAAGCTTGGCAAGTGAAGACTCTGATGGATTAACACCTAGTGCTGTGTTTTCTC BLAST |
Tissue | flowers |
Gene name | LI_gene_77048; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_30651
Blastp | Receptor-like protein kinase FERONIA from Arabidopsis with 72.86% of identity |
---|---|
Blastx | Receptor-like protein kinase FERONIA from Arabidopsis with 71.15% of identity |
Eggnog | Serine Threonine protein kinase(COG0515) |
Kegg | Link to kegg annotations (AT3G51550) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019450394.1) |
Pfam | Carbohydrate-binding protein of the ER (PF12819.6) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |