Ll_transcript_32678

• Id Trinity: FTRINITY_DN58447_c4_g1_i1
• Name Transcript: Ll_transcript_32678
• Sequence: CTCGTTTCTTCTCCAAAAATCATCTCTTTCTCTCTCTACTTTCTCTCTCTACTTTCTACTTTCACTCCCAAAAATTCACTTCATTTCAATTTCAATTGGG TTTTTCTGGAATTGGGTTTTTCTTTATCCGATTTGAGGATCAATTCTCTCGATTCTTTAGGGAATTGATCGGGTTTTGTTGAATCTATTTATCTGATTCA TGCGATGCTATTAGTTCTGAGATGAAGTTGAAGAGAAAGAGGGCACTTGAAGTGCCTCCAAAAATTAAAAGCTTCATCAGCAATGTTACTTCAGTTCCTC TTGAGAAGATAGAAGAACCTTTAAAAGACTTTGTTTGGGAGTTCGATAAGGGAGATTTTCATCACTGGGTTGATCTTTTTAACCATTTTGATTCATTCTT TGAGAAGTTTATAAAATCAAGGAAGGATCTACAGATTGATGATGATTTTCTGCGCTCGGATCCTCCCTTCCCTGGACAGGCTGTACTTCAGATTCTTCGT GTCATTAGAATAATTTTGGATAATTGCACAAATAAACATTTCTATAGTTCCTTTGAGCAGCATCTCTCGGCATTGCTTGCTTCTACTGATCCAGATGTGG TTGAGGCCAGCCTGGATACTCTTGCGACCTTTTTGAAGAGAACAGTTGGGAAGTACTCCATAAGAGACACGTCTTTGAATTCAAAATTGTTTGCACTTGC ACAAGGATGGGGTGGAAAGGAAGAGGGACTTGGATTAATTGCATCAGCTGTGCCTAATGGCTGCGATTCTCTTGCTTATGAGTTGGGTTGTACCCTTCAT TTTGAGTTTTATGCAGCAAATGACTCAGAAAGTGACATCAAAGTGGCTGAACCCTTGGTACAAGGGTTACAAATTATTCACTTATGCAACACTAACAAAT GTGTGGAAACTGATCTTGAGATTTTGCACAAGTTAGTTACAAAATATAAGGTACCTGCCAGTTTCAGATTTTCTTTATTGACAAGATTGCGGTTTGCTAG GGCTTTTGGTTCTTTGGCTTCTAGACAGCAGTACACATGCATTCGTCTGTATGCTTTCATAATTCTGATTCAAGCATGTGCTGATGCTGATGACCTGGTT TCGTTTCTTAATGCTGAGCCTGGTTTTCTCAATGAATTAGTGTCATTACTGAGCTATGAAGATGCAGTCATGGAAAAAATCCGGATTTTATGCTTGCATT CATTAGCTGCTCTTTGCCAAGATCGATCCCGTCAATCTTCAGTACTGACTGCGGTTACATCTGGTGGGCACCGTGGAATTTTATCTAGCCTGATGCAAAA AGCCATTGACTCCGTTGTTAGTGGTGACACCTCAAGATGGTCTGTTCATTTTGCAGAAGCTCTATTATCTCTTGTCACCGTGTTGGTTTCATCATCATCT TCTGGGTGCTCTGCCATGCGTGAAGCAGGATTTATTCCTACTCTGCTACCTCTCCTTAAAGATATAAATCCACAACATTTGCATCTGGTTGAAAAAGCAG TGCGTATTTTGGAAGCTTTTATGGATTACAGTAATCAAGCTGCTGCATTGTTCAGAGATTTGGGAGGTTTAGATGATACTATCTCTCGCCTAAAGATTGA GGTCTCCCATGTAGAAACTGGTGGAAAGCAGCCAGATGAAAATTCTGAGTCTAGTGCCAGGAGTGCACATATGAAAGAAGGTTCTTCAACTAGCCAAGAT GACATGCAACCTTTGTATTCTGAGCCATTAATTGCATATCATCGGCGGTTGCTGATGAAAGCTTTATTGCGTGCTATATCCCTGGGAACTTATGCCCCTG GAAATACTACTCGTATCTATGGATCTGAAGAGAATGTGCTGCCTCATTGCTTATGTATAATTTTCAGAAGAGCCAATGAATTTGGTGGTGGAATTTTTTC ACTCGCAGCTACTGTCATGAGTGACTTAATACAAAAGGATCCTACATGTTTTCCTGTCTTAGATACAGCTGGTCTTCCATCTGCCTTCTTGGATGCTATA ATGGATGATGTTCTGAACTCTGCAGAAGCCATTACATGCATCCCCCAGTGTTTGGATGCCTTATGCCTGAATAGTAATGGTCTCCAGGCTGTGAAAGATA AGAATTCTTTGAGGTGTTTTGTGAAAGTGTTTACTTCTAGAACATATTTGCGTGCTCTTACTGGTGACACACCTGCATCTTTGTCTAGTGGATTGGATGA ATTGATGCGACATGCTTCTTCATTACGTGGGCCTGGAGTGGATATGTTGGTTGAGATTCTGGAAACTATCTCAAAAATCGGGTCTGGAATCGATTTGTCG TCCTCGTGTTCTGATCCTTGCTCTTCAACCTCTGTTCCAATGGAAATGGATGGCGAGAACAAAAATTTGATGTTGCCTGATAATAGGGAATCTTCCAAGA CAGATAATACAAAGCAGATTACTGAGCCTTCTCCTGATGCTTCAATAATGAATATTGAATCATTTCTTCCAGATTGTGTTAACAATGTTGCTCGTTTACT TGAGACAATTCTCCAGAACGCTGATACGTGTCGAATATTTGTTGAGAAAAAGGGGATTGAAGCTGTTCTCCAGTTATTCACCTTGCCGTTGATGCCTCCT TTTGCTTTTCTTGGGCAGAACATATTTGCTGCCTTCAAAAACTTCTCCCCCCAGCACAACGTTTCTCTTGCTCGCACTGTATGTTCCTTCTTGAGGGAAC ATCTGAAATCAACCAATGAGCTTTTAGATTCGGTGGGAGGAACTCAGCTTGCTGTAGTTGAATCTGCAAAGCAGACAAAAGTGTTGAAATATCTTTCTAG CCTTGAAGGTCTTCTAACTCTTTCTGCATCTTTGTTAAAAGGAACGGCAACTACCGTGGTCTCTGAACTAAGCACTTCAGATGCTGATGTTTTGAAAGAT CTTGGGAGAACCTACAAAGAAATAATGTGGCAAATATCTTTGTGTAATGATTCCAAGGCAGAGGAAAAGAACACTGATCAAGAACCTGGAATTTCACAGG TACCCCCATCTGCTGCTGTTGAAAGAGAGAATGACGATGATGCAAATGTTCAGACAGTGAGATACACAAATCCAGTTTTTGCTAGGCATGGTTCGCATTC CCTGTGGAGTGGAGAACGTGACTTTGTTTCTGTAGTTCGTTCTGGAGAAAGTTTGCACCGCCGTAATCGGCATGGATTATCCCGCCTAAGAGGTGGAAGG ACTGGTCGTCACGTGGAAGCTTTAAACATTGATTCTGAGGCAGCTTCAAGTTTGGTGGAGGCACCTTCATCCCAAAATCTGAAAAAGAAAAGCCCTGATG TTCTTGCCTCGGAGATTCTTAACAAGCTGGCTTCAACTTTGCGCTCTTTCTTCACTGCTCTTGTAAAGGGATTCACCTCACCGAATCGTCGTAGAGCTGA CCCTGGGCCACTAAGCTCAGCTTCAAAGATTCTCGGAACTGCCTTAGCTACAAATTTTTTAGAGGCTCTTAGTTTTTCTGGGCACTTTACTTATGCTGAA CTTGAGATGTCGCTTTCTGTAAAATGTAGATATCTTGGAAAAGTTGTGGATGATATGGCAGCTCTCACATTTGACAGCAGGCGCCGGAGTTGTTATACTG TCATGGTTAATAATTTTTATGTCCATGGGACATTTAAAGAGCTACTTACAACATTTGAAGCTACTAGTCAGTTGCTATGGACACTTCCATGTTCTTTTCC ATCCTCAGATATTGATATTGGAAAGAAAGGGGATGGGAGTAAATTGTCCCATAACATTTGGCTACTTGATACATTACAAAGCTACTGTCGTTTGCTCACG TATTTTGTAAACTCTTCTATACTTTTGTCCGCAACCTCAGCATCTCAGGCAGAACTTCTTGCTCAGCCAGTTGCAGTTGGCCTGTCAATCGGACTCTTTC CGGTTCCTAGAGATCCAGATGCATTTGTTAAAATGTTGCAATCCCAGGTTCTGGATGTGATCCTACCAGTCTGGAATCATCCAATGTTTTCTAATTGCAG TCCTGGTTTCATTTCCTCTATTATTTCACTTGTTACACATGTATACTCTGGCGTTGGAGATGTCAAGCGGAATCATAGTAATATTGTGGGAATCACAAAC CAACGTTTCATGCCCCCACCACCTGATGAGACAACTATTGGCACAATTGTTGAAATGGGATTTTCTAGGGCACGGGCTGAGGAAGCACTGAGAAGAGTTG AAACAAATAGTGTTGAAATGGCCATGGAGTGGCTGTTTAGTCATGCTGATGATCCTGTACAGGAGGATGATGAACTTGCAAGGGCACTTGCTCTGTCCCT AGGAAATAGTTCTGAAACTAGTAAAGTGGATGGTGCTGAGAAGACTATAGGTGTGCTAACTGAAGAGGGACATGTGAAGAAACCTCCAATTGATGATATA CTTGCTGCTTCTGTAAAGCTGTTCCAGGGGAGTGATTCTGTGGCATTTCAGTTAACAGATTTGCTTGTAACACTTTGCAGTCAGAACAAAGGTGAAGATC GCCCAAAAATAATATCTTATCTTCTGCAACAGCTAAAACTTTGTCCATTGGATTTTTCGAAGGATAACTGTGCATTGAGTGTGTTAGCACATATTATAGC ACTGCTTCTTTTTGAGGATGGAACTACACGTGAAATTGCTGCTGAGAATGGCATCATATCTACTGCCATAGATATCTTGACAGACTTCAAAGGCAAACAT GAGTCAGGGAAAGAACTACTGGCACCTAAATGCATTAGTGTTTTACTACTTATATTGGACCAGATGCTGCAGTCAAGACCAAAAACTGAGAATACAGATG GAACCCAAACTGGTTCTGTGCCTGAGTCATCTGGGGATCATGGTTCCCTTCAATTTGCAGGTGTGATTGTGCAGAAGGAAAAAAAATTAGATGTAAATGT GAAAGAACCTGGTGCTGCTTTAGATAACATACTGGGGAGCTCTACTGGTTTTGCATCTATTGATGAGAGTCTTAAGTTGCTGAATATTGTTTGTGATTTG ATAAAACAACATGTCCCGGCTGTGGTCATGCAGGCTGTTTTGCAGTTATGTGCCCGATTAACAAAAACACATGCTTTGGCTTTACAGTTCCTTGAAAATG GAGGGCTGACTGCTCTTTTTAGTCTTCCAAAGAATTGTTTTTTTCCTGGGTATGATACTGTTGTATCAGCTATTGTTCGACATCTCCTTGAAGATCCTCA AACACTACAAACTGCCATGGAATTAGAGATACGACAAACTTTAAGTGGAAATCGCCATTCTGGACGTGTCTCTCCCCGATCATTTTTGACATCATTAGCC CCTGTTATCTCTAGGGATCCAGTGGTTTTCATGAAAGCTGCAACAACAGTTTGTCAGTTAGAGACATCAGGGGGAAGGACAATAGTTGTTTTATCGAAGG AAAAAGAAAAGGAAAAATCTAAAGCATCGAGTACTGAGGCTGGGTTATCCTCTAATGAATGTGTCCGAATACCTGAAAGCAAGTCACATGATGGATCAGC TAAATGTTTGAAAAGCCACAAAAAGGTTCCTGTTAATCTCACTCAAGTAATTGATCAGCTTCTTGAGATTGTGCTAAAGTACCCGCCTATGAATGGGCAG GAAGACTCTGAGTGTGGCTCAACTTTCATGGATATAGATGAACCTGCTATGAAGGTTAAGGGTAAATCAAAGGTTGAAGAGGTGGGAGTGTTAGAGACTG AATCTGAAAGGTCTACTGGATTGGTGAAGGTAACTTTTGTTCTCAAGTTATTAAGTGACATTCTTCTAATGTATGGGCATGCAGTGGGTGTCATACTCAG ACGTGATTCTGAAATGGGTCAATTCCGTGGATCCAATCAACCATCTGGACATAGTGGTATTATCCATCATGTATTACATCGGTTGCTGCCCCTCTCTGTT GACAAGTCTGCAGGACCTGATGATTGGAGAAGTAAGTTGTCTGATAAGGCTTCATGGTTCCTGGTAGTTTTGTGTGGTCGGTCTAGTGAAGGGCGTAAGC GAGTGACAAATGAACTTGTTAAAGTATTGATGTCCTTTTCAAACTTGGAGAGCAATTCAACGAAAAATAGTTTACTGCCAGATAAAAGGCTTTTTACTTT TATTGACTTAGTATACTCTATTTTGTCAAAAAATTCATCAGCTGGTAGCCTACCGGGTTCTGGATATTCGCCTGACATTGCGAAAAGCATGATAGATGGT GGAATCATTCAGTGTTTAACTAGTATCCTGCAAGTGGTTGATCTGGATCATCCCGATGCACCCAAGATTGTGAATCTTATACTAAAAGGTTTAGAAGGTC TTACAAGAGCTGCTAATGCTAGTGAGCATATCATTAAATCTGATGGGATTGAAAAGAGAAGATCTGCTGGTTCAAATGATAGACCTGATGATCAAATAAG AACTTCATCTGCAGCTGAAACAGTAAGAGATGATCAGAATGCAAGCAGTCAAGAGGCACATGGATATACAATGGATAATGCACATGATCAAGGGACTTCT CAAGGTAATCATCACACTGATAATCCAAATCAAACAGTGCAGGGTATGAGAGTTGAAGGGGAGACTCAAAACCCGTCAATGGAACTCGGAGTGGACTTTA TGCCTGAAGAGATTGGAGAGGGTGCTGTCTTGCATAACCCAGATCAAATTGAGATGACTTTTCATGTTGAGAATAGGGCAGATGATGACATGGGTGATGA AGATGATGATATGGGTGATGATGGTGATGATGATGAAGATGATGAAGATGGAGAGGATGAAGAAGAGGATATAGCAGAAGATGGTG
• Tissue: flowers
• Gene name: LI_gene_77157;
• Additional information: details;

Expression of Ll_transcript_32678

FPKM

• FPAB: 9.3
• FPNAB: 6.2
• LF1: 9.4
• LF2: 9.4
• LF3: 9.2
• LF4: 1.3
• UF1: 3.1
• UF2: 9.1
• UF3: 8.6
• UF4: 0.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_32678

• Blastp: E3 ubiquitin-protein ligase UPL1 from Arabidopsis with 62.44% of identity
• Blastx: E3 ubiquitin-protein ligase UPL1 from Arabidopsis with 62.21% of identity
• Eggnog: ubiquitin protein ligase(COG5021)
• Kegg: Link to kegg annotations (AT1G55860)
• CantataDB: Link to cantataDB annotations (CNT0000583)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448026.1)
• Pfam: Domain of Unknown Function (DUF908) (PF06012.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;