Ll_transcript_32680

Id TrinityFTRINITY_DN58447_c4_g1_i3
Name TranscriptLl_transcript_32680
SequenceCACCTTCTTCCCTCAGCTCAGCTTTCTTCTCCAAAATTCTTTGTTTCTCTTTCTCTCTACTTTCTCTCTCTTTCTTTCTCTCTCTCTACTTTCAACATTC ACTCATAGAATTCACTTCAATTCTATCATATCATTCATTTCAGCAATTCGATTTTTCTGTACCGATTGGAGGATCAATTCTCCATTGTGAGGGGATTGAT CGAGTTTCGCTGAATCAATTTCTATTATCCCTGCGACACTGTCACTTCCGAAATGAAGTTGAAGAGAAAGAGGACACTTGAAGTGAGAACAGTTGGGAAA TACTCCATAAGAGACACTTCTTTGAATTCAAAATTGTTTGCATTTGCACAAGGATTTGGTGGAAAGGAAGAGGGACTTGGATTAATTGCATCAGCTGCAC CTAATGCCTGTGACCCTCTTGCTTATGAATTGGGTTATACCCTTCATTTTGAGTTTTATGCAGCAAATAAATCAGAGTGTGACATCAAGGTGTCTGAACC CTTGGTACAAGGATTGCAAATTATTCACTTATGTGACATCAACAAATGTGTGGAAACTGATCTGGAGCTTCTGCGTAAGTTAGTTACAGAATATAAGTTA CCTGCCGGTTTAAGATTTTCTCTATTGACAAGATTGCGGTTTACAAGGGCATTTGGTTCTTTGGCTTCTAGACAGCAATACACATGCATTCGTCTTTATG CTTTCACAGTTTTTATTCAAGCATGTAGTGATGCCAATGACCTGGTTTCGTTCCTTAATGCTGAGCCTGGATTTATCAATGAATTAGTGTCATTGCTGAG CTATGAAGATGCAGTCATGGAAAAAATCCGGATTTTATGCTTGCATTCATTAGCTGCTCTTTGCCAAGATCGATCCCATCAAACTTCAGTACTGACAGGG GTTACATCTGGTGGGCACCGTGGAATTTTATCTAGCCTGATGCAAAAAGCCATTGACTGTGTTGTTAGCGGTGATAACTCAAGATGGTCTGTTCATTTTG CAGAAGCTCTATTATCGCTTGTCACTGTGTTGGTTTCATCATCATCATCATCTGGGCGCTCTGCCATGTGTGAAGCAGGATTTATTCCTACTCTGTTACC CCTCCTTAAAGATACAAATCCACAGCATTTGCATCTGGTTGAAAAAGCTGTGCATATTTTAGAAGCTTTTATGGAATACAGTAATCAAGCTGTTGCATTG TTCAGAGATTGGGGAGGTTTAGATGATACTATCTCTCGCCTATATATTGAAGTCTCCCATGTAGAAAGTGGTGGAAAGCATCCTGATGAAAATTCTGAGT CTTGTGCTAGGAATGTACATATGAAAGAAGGTTCTTCTACTGGCCTAAATGGCATGCAACCCTTGTATTCTGAGCCATTAATTGCATATCATCGGCGGTT GCTGATGAAAGCTTTATTGCGTGCTATATCCCTTGGAACTTATGCCCGTGAAAGCATTGCTCATATCTATGGGTATGAAGAGAATGTGCTACCTTATTGC TTATGTATAATTTTCAGAAGAGCCAAAGATTTTGGTGGTGGAGTTTTTTCGCTCGCAGCTACTGTCATGAGAGACTTAATACAAAAGGATCCGACATGTT TTCCTGTATTAGATACAGCTGGTCTTCCGTCAGCCTTCTTGGATGCTATAATGGACGATGTTCTGAACTCTGCCGAAGCTATCACATGCATCCCCCAGTG TTTGGATGCCTTATGTCTTAATAGTAATGGTCTCCAGGCTGTAAAAGATAAGAACTCTTTGAGGTGTTTTGTGAAAGTGTTTACTTCTAGAACATATTTG CGTACTCTTACAGGTGATACACCTGCATCTTTGTCTAGTGGATTGGATGAATTAATGCGCCATGCTTCTTCGTTACGTGGGCCTGGAGTTGATATGTTGG TTGAGATTTTGGAAACTATCTCAAAAATTGGGTCAAGAACCGATTCACCGTCCTTGCCTTGCTCTTCAATCTCTGTTCCAATGGAAATGGATGGTGAGGA CAATAATTTGATGTTGCCTGATAACAGGGAATCATCCAAGGCAGATAGTGCAGAGCAAATTATTGAGCCATCTGATGCTTCAGTAATGAATATTGAGTCC TTTCTTCCAGATTGTGCTAACAATGTTGCTCGTTTACTTGAGACAATTCTTCATAATGCTGATACGTGTCGAATATTTGTTGAGAAAAAGGGGATTGAAG CTGTTCTCCAGTTATTTACCTTGCCATTGATGCCTCCTATTGTTTCTCTTGGGCAGAACATATTTGTTGCTTTCAAGAACTTCTCCCCACAACATAATGT TTCTCTTGTTCGCACTCTATGCTCCTTCTTGAGGGAACATCTGAAATCTACCAATGAGTTTTTAGATTTGGTGGGAGGAACTCAGATTGCTCTAGTTGAA TCTGCAAAGCAGACAAAGGTGTTGAAATATCTTTCTAGTCTTGAAGGTCTCCTATCTCTTTCTGCATCTTTGTTAAAGGGAGCAGCAATTACTGTGGTCT CTGAACTAAGCACTTCAGATGCAAGTGTTTTGAAAGATATTGGGAGATCCTACAAAGAAATAATTTGGAAAATATCTTTGTGTAATGATTCCATGGCAGA GGAAAATAACACTGATCAAGAACCCGAGATGTCACAGGTACCCTCACCTGATACTGTTGAAAGAGAGAGTGATGATGATGGAAATGTTCAGACAATGAGA TACACAAATTCAGTTTTTGCTGGGAGTGGTTCACATTCCATGTGGAGTGGAGAACGTGACTTTGTTTCTGTAGTTCGTTATGGAGAAAGTTTGCACCGCC GTAGTCGGCATGGATTATCCCGTTTAAGAGGTGGATGGACTGGTAGTCACTTGGAAGCTTTAAACATTAATTCTGAGCCATCTTCAAGTTTGGTGGAGGT ATCTTTATCCCATAATTTGATAAAGAAAAGCCCTGATGTTCTTGCCCTAGAGATTCTTAACAAGTTGGCTTCAACCATGCGCTCTTTCTTCAATGCTCTG GTAAAGCGGTTCACTTCACCGAATCGCCGAAGACCTGACCCAGGGCCACCGAGCTCAGCTTCAAAGACTCTCAGAATTGTGTTAGCTACAAGTTTTCTTG AGGCTCTTAGTTTTTATGGGCACTATACTTATGCTGGACTTGAGATGTCACTTTCTGTAAAATGTAGATATCTTGGGAAAATTGTGGATGATATGGCAGC TCTCATATTTGACAGCAGGCGTCGGAGTTGTTATACTGCCATGGTTAATAATTTTTATGTCAATGGGACGTTTAAAGAGATACTCACAACATTTGAAGCT ACTAGTCAGTTGTTATGGACTCTTCCATGTACGTTTCCATCAGCAGACATTGATATTGGAAAGAAAGGGGATGGGAGTAAACTGTCCAATAACATCTGGC TACTTGATACATTACAAAGCTATTGTCGTTTGCTTGAATATTTTGTAAACTCATCTTTACTTTTGTCCCCAATCTCAACATCTCAGGCAGAGCTTCTTAT TCAACCAATTGCAGTTGGCCTGTCAATTGGACTCTTTCCACTTCCTAGAGACCCAGATGCATTTATTCGTATGTTGCAATCTCAGGTTGTGGATGTGATA CTACCGGTCTGGAATCATCCAATGTTTTCTAATTGTAGTCCTGGTTTCATTTCATCTATTATTTCACTTGTTACACATGTATACTCTGGTGTTGGAGATG TCAAGCAAAATCATGGTAACATTGTGGGAGGTGCAAACCAAAATTTCATGCCCCCACCACCTGATGAGACAACCATTGCCACCATTGTTGAGATGGGATT TTCTAGGGCAAGGGCTGAGGAAGCACTGAGAAGAGTTGAAACAAATAGTGTTGAGATGGCCATGGAGTGGTTGTTTAGTCATGCTGATGATCCGGTCCAG GAGGATGATGAACTTACAAGGGCACTGGCTCTGTCCCTAGGAAATAGTTCTGAAAGTACTAAAGTTGATAGTGATGACAAGACTATAGATGTGCTAAATG AAGAGGGGCATGTGAAGAAACCTCCAGTTGATGATATACTTGTTGCCTGTGTCAAGTTGTTTCAGGGTAGTGGTTCTGTGGTATTTCAGTTAACAGATTT TTTTGTTACACTTTGCAGTCAGAACAAAGGTGAAGGTCGTCCTAAAGTAATATCTTATCTTCTGCAGCAGCTAAAACTTTGTCCGTTGGATTTTTCGAAG GATAACTGTCAATTGAGTGTGTTAGCACATATTATAGCACTGCTTCTTTGTGAGGATGAAAGTACACGTGAAATTGCTGTTGAGAATGGCATCATATCTA CCACCATAGATATCTTGACAAACTTCAAAGGCACACATGATTCAGAGAAAGAACTATTGGCACCTAAATGCATTAGTGCTTTACTACTTATATTGGACCA GATGCTGCAGTCACGGGCAAAAACTGAGAGTACAGGTGGAATGCAAACTAGTTTTATACCTAATTCATCCGGGGACCATGGTTCCTTGCAATTTGCAGGT GCAGTTGTACATAGGGGGGACAAAATAGATGGGAATGAGAAAGAACCTGGTGTTGCCTTAGAGAACATACTGGGTAAGTCTACTGGCTTTGCATCTATTG ATGAGAGTCATATGTTCCTGAATATTGCTTGTGATTTGATAAAACAGCATGTCCCGACTGTAGTCATGCAAGCTGTTTTGCAGTTATGTGGCCAGTTAAC AAAAA BLAST
Tissueflowers
Gene nameLI_gene_77157; 
Additional informationdetails; 

Expression of Ll_transcript_32680

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_32680
BlastpE3 ubiquitin-protein ligase UPL1 from Arabidopsis with 59.7% of identity
BlastxE3 ubiquitin-protein ligase UPL1 from Arabidopsis with 59.7% of identity
Eggnogubiquitin protein ligase(COG5021)
KeggLink to kegg annotations (AT1G55860)
CantataDBLink to cantataDB annotations (CNT0000539)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019463239.1)
PfamDomain of Unknown Function (DUF908) (PF06012.11)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;