Ll_transcript_32681

• Id Trinity: FTRINITY_DN58447_c4_g1_i4
• Name Transcript: Ll_transcript_32681
• Sequence: CACCTTCTTCCCTCAGCTCAGCTTTCTTCTCCAAAATTCTTTGTTTCTCTTTCTCTCTACTTTCTCTCTCTTTCTTTCTCTCTCTCTACTTTCAACATTC ACTCATAGAATTCACTTCAATTCTATCATATCATTCATTTCAGCAATTCGATTTTTCTGTACCGATTGGAGGATCAATTCTCCATTGTGAGGGGATTGAT CGAGTTTCGCTGAATCAATTTCTATTATCCCTGCGACACTGTCACTTCCGAAATGAAGTTGAAGAGAAAGAGGACACTTGAAGTGAATGTTTGATTATTG AGAAGATAGAAGAACCTTTAAAAGGCTTTGTTTGGGAGTTCGATAAGTTGGGAAATACTCCATAAGAGACACTTCTTTGAATTCAAAATTGTTTGCATTT GCACAAGGATTTGGTGGAAAGGAAGAGGGACTTGGATTAATTGCATCAGCTGCACCTAATGCCTGTGACCCTCTTGCTTATGAATTGGGTTATACCCTTC ATTTTGAGTTTTATGCAGCAAATAAATCAGAGTGTGACATCAAGGTGTCTGAACCCTTGGTACAAGGATTGCAAATTATTCACTTATGTGACATCAACAA ATGTGTGGAAACTGATCTGGAGCTTCTGCGTAAGTTAGTTACAGAATATAAGTTACCTGCCGGTTTAAGATTTTCTCTATTGACAAGATTGCGGTTTACA AGGGCATTTGGTTCTTTGGCTTCTAGACAGCAATACACATGCATTCGTCTTTATGCTTTCACAGTTTTTATTCAAGCATGTAGTGATGCCAATGACCTGG TTTCGTTCCTTAATGCTGAGCCTGGATTTATCAATGAATTAGTGTCATTGCTGAGCTATGAAGATGCAGTCATGGAAAAAATCCGGATTTTATGCTTGCA TTCATTAGCTGCTCTTTGCCAAGATCGATCCCATCAAACTTCAGTACTGACAGGGGTTACATCTGGTGGGCACCGTGGAATTTTATCTAGCCTGATGCAA AAAGCCATTGACTCCGTTGTTAGTGGTGACACCTCAAGATGGTCTGTTCATTTTGCAGAAGCTCTATTATCTCTTGTCACCGTGTTGGTTTCATCATCAT CTTCTGGGTGCTCTGCCATGCGTGAAGCAGGATTTATTCCTACTCTGCTACCTCTCCTTAAAGATATAAATCCACAACATTTGCATCTGGTTGAAAAAGC AGTGCGTATTTTGGAAGCTTTTATGGATTACAGTAATCAAGCTGCTGCATTGTTCAGAGATTTGGGAGGTTTAGATGATACTATCTCTCGCCTAAAGATT GAGGTCTCCCATGTAGAAACTGGTGGAAAGCAGCCAGATGAAAATTCTGAGTCTAGTGCCAGGAGTGCACATATGAAAGAAGGTTCTTCAACTAGCCAAG ATGACATGCAACCTTTGTATTCTGAGCCATTAATTGCATATCATCGGCGGTTGCTGATGAAAGCTTTATTGCGTGCTATATCCCTGGGAACTTATGCCCC TGGAAATACTACTCGTATCTATGGATCTGAAGAGAATGTGCTGCCTCATTGCTTATGTATAATTTTCAGAAGAGCCAATGAATTTGGTGGTGGAATTTTT TCACTCGCAGCTACTGTCATGAGTGACTTAATACAAAAGGATCCTACATGTTTTCCTGTCTTAGATACAGCTGGTCTTCCATCTGCCTTCTTGGATGCTA TAATGGATGATGTTCTGAACTCTGCAGAAGCCATTACATGCATCCCCCAGTGTTTGGATGCCTTATGCCTGAATAGTAATGGTCTCCAGGCTGTGAAAGA TAAGAATTCTTTGAGGTGTTTTGTGAAAGTGTTTACTTCTAGAACATATTTGCGTGCTCTTACTGGTGACACACCTGCATCTTTGTCTAGTGGATTGGAT GAATTGATGCGACATGCTTCTTCATTACGTGGGCCTGGAGTGGATATGTTGGTTGAGATTCTGGAAACTATCTCAAAAATCGGGTCTGGAATCGATTTGT CGTCCTCGTGTTCTGATCCTTGCTCTTCAACCTCTGTTCCAATGGAAATGGATGGCGAGAACAAAAATTTGATGTTGCCTGATAATAGGGAATCTTCCAA GACAGATAATACAAAGCAGATTACTGAGCCTTCTCCTGATGCTTCAATAATGAATATTGAATCATTTCTTCCAGATTGTGTTAACAATGTTGCTCGTTTA CTTGAGACAATTCTCCAGAACGCTGATACGTGTCGAATATTTGTTGAGAAAAAGGGGATTGAAGCTGTTCTCCAGTTATTCACCTTGCCGTTGATGCCTC CTTTTGCTTTTCTTGGGCAGAACATATTTGCTGCCTTCAAAAACTTCTCCCCCCAGCACAACGTTTCTCTTGCTCGCACTGTATGTTCCTTCTTGAGGGA ACATCTGAAATCAACCAATGAGCTTTTAGATTCGGTGGGAGGAACTCAGCTTGCTGTAGTTGAATCTGCAAAGCAGACAAAAGTGTTGAAATATCTTTCT AGCCTTGAAGGTCTTCTAACTCTTTCTGCATCTTTGTTAAAAGGAACGGCAACTACCGTGGTCTCTGAACTAAGCACTTCAGATGCTGATGTTTTGAAAG ATCTTGGGAGAACCTACAAAGAAATAATGTGGCAAATATCTTTGTGTAATGATTCCAAGGCAGAGGAAAAGAACACTGATCAAGAACCTGGAATTTCACA GGTACCCCCATCTGCTGCTGTTGAAAGAGAGAATGACGATGATGCAAATGTTCAGACAGTGAGATACACAAATCCAGTTTTTGCTAGGCATGGTTCGCAT TCCCTGTGGAGTGGAGAACGTGACTTTGTTTCTGTAGTTCGTTCTGGAGAAAGTTTGCACCGCCGTAATCGGCATGGATTATCCCGCCTAAGAGGTGGAA GGACTGGTCGTCACGTGGAAGCTTTAAACATTGATTCTGAGGCAGCTTCAAGTTTGGTGGAGGCACCTTCATCCCAAAATCTGAAAAAGAAAAGCCCTGA TGTTCTTGCCTCGGAGATTCTTAACAAGCTGGCTTCAACTTTGCGCTCTTTCTTCACTGCTCTTGTAAAGGGATTCACCTCACCGAATCGTCGTAGAGCT GACCCTGGGCCACTAAGCTCAGCTTCAAAGATTCTCGGAACTGCCTTAGCTACAAATTTTTTAGAGGCTCTTAGTTTTTCTGGGCACTTTACTTATGCTG AACTTGAGATGTCGCTTTCTGTAAAATGTAGATATCTTGGAAAAGTTGTGGATGATATGGCAGCTCTCACATTTGACAGCAGGCGCCGGAGTTGTTATAC TGTCATGGTTAATAATTTTTATGTCCATGGGACATTTAAAGAGCTACTTACAACATTTGAAGCTACTAGTCAGTTGCTATGGACACTTCCATGTTCTTTT CCATCCTCAGATATTGATATTGGAAAGAAAGGGGATGGGAGTAAATTGTCCCATAACATTTGGCTACTTGATACATTACAAAGCTACTGTCGTTTGCTCA CGTATTTTGTAAACTCTTCTATACTTTTGTCCGCAACCTCAGCATCTCAGGCAGAACTTCTTGCTCAGCCAGTTGCAGTTGGCCTGTCAATCGGACTCTT TCCGGTTCCTAGAGATCCAGATGCATTTGTTAAAATGTTGCAATCCCAGGTTCTGGATGTGATCCTACCAGTCTGGAATCATCCAATGTTTTCTAATTGC AGTCCTGGTTTCATTTCCTCTATTATTTCACTTGTTACACATGTATACTCTGGCGTTGGAGATGTCAAGCGGAATCATAGTAATATTGTGGGAATCACAA ACCAACGTTTCATGCCCCCACCACCTGATGAGACAACTATTGGCACAATTGTTGAAATGGGATTTTCTAGGGCACGGGCTGAGGAAGCACTGAGAAGAGT TGAAACAAATAGTGTTGAAATGGCCATGGAGTGGCTGTTTAGTCATGCTGATGATCCTGTACAGGAGGATGATGAACTTGCAAGGGCACTTGCTCTGTCC CTAGGAAATAGTTCTGAAACTAGTAAAGTGGATGGTGCTGAGAAGACTATAGGTGTGCTAACTGAAGAGGGACATGTGAAGAAACCTCCAATTGATGATA TACTTGCTGCTTCTGTAAAGCTGTTCCAGGGGAGTGATTCTGTGGCATTTCAGTTAACAGATTTGCTTGTAACACTTTGCAGTCAGAACAAAGGTGAAGA TCGCCCAAAAATAATATCTTATCTTCTGCAACAGCTAAAACTTTGTCCATTGGATTTTTCGAAGGATAACTGTGCATTGAGTGTGTTAGCACATATTATA GCACTGCTTCTTTTTGAGGATGGAACTACACGTGAAATTGCTGCTGAGAATGGCATCATATCTACTGCCATAGATATCTTGACAGACTTCAAAGGCAAAC ATGAGTCAGGGAAAGAACTACTGGCACCTAAATGCATTAGTGTTTTACTACTTATATTGGACCAGATGCTGCAGTCAAGACCAAAAACTGAGAATACAGA TGGAACCCAAACTGGTTCTGTGCCTGAGTCATCTGGGGATCATGGTTCCCTTCAATTTGCAGGTGTGATTGTGCAGAAGGAAAAAAAATTAGATGTAAAT GTGAAAGAACCTGGTGCTGCTTTAGATAACATACTGGGGAGCTCTACTGGTTTTGCATCTATTGATGAGAGTCTTAAGTTGCTGAATATTGTTTGTGATT TGATAAAACAACATGTCCCGGCTGTGGTCATGCAGGCTGTTTTGCAGTTATGTGCCCGATTAACAAAAACACATGCTTTGGCTTTACAGTTCCTTGAAAA TGGAGGGCTGACTGCTCTTTTTAGTCTTCCAAAGAATTGTTTTTTTCCTGGGTATGATACTGTTGTATCAGCTATTGTTCGACATCTCCTTGAAGATCCT CAAACACTACAAACTGCCATGGAATTAGAGATACGACAAACTTTAAGTGGAAATCGCCATTCTGGACGTGTCTCTCCCCGATCATTTTTGACATCATTAG CCCCTGTTATCTCTAGGGATCCAGTGGTTTTCATGAAAGCTGCAACAACAGTTTGTCAGTTAGAGACATCAGGGGGAAGGACAATAGTTGTTTTATCGAA GGAAAAAGAAAAGGAAAAATCTAAAGCATCGAGTACTGAGGCTGGGTTATCCTCTAATGAATGTGTCCGAATACCTGAAAGCAAGTCACATGATGGATCA GCTAAATGTTTGAAAAGCCACAAAAAGGTTCCTGTTAATCTCACTCAAGTAATTGATCAGCTTCTTGAGATTGTGCTAAAGTACCCGCCTATGAATGGGC AGGAAGACTCTGAGTGTGGCTCAACTTTCATGGATATAGATGAACCTGCTATGAAGGTTAAGGGTAAATCAAAGGTTGAAGAGGTGGGAGTGTTAGAGAC TGAATCTGAAAGGTCTACTGGATTGGTGAAGGTAACTTTTGTTCTCAAGTTATTAAGTGACATTCTTCTAATGTATGGGCATGCAGTGGGTGTCATACTC AGACGTGATTCTGAAATGGGTCAATTCCGTGGATCCAATCAACCATCTGGACATAGTGGTATTATCCATCATGTATTACATCGGTTGCTGCCCCTCTCTG TTGACAAGTCTGCAGGACCTGATGATTGGAGAAGTAAGTTGTCTGATAAGGCTTCATGGTTCCTGGTAGTTTTGTGTGGTCGGTCTAGTGAAGGGCGTAA GCGAGTGACAAATGAACTTGTTAAAGTATTGATGTCCTTTTCAAACTTGGAGAGCAATTCAACGAAAAATAGTTTACTGCCAGATAAAAGGCTTTTTACT TTTATTGACTTAGTATACTCTATTTTGTCAAAAAATTCATCAGCTGGTAGCCTACCGGGTTCTGGATATTCGCCTGACATTGCGAAAAGCATGATAGATG GTGGAATCATTCAGTGTTTAACTAGTATCCTGCAAGTGGTTGATCTGGATCATCCCGATGCACCCAAGATTGTGAATCTTATACTAAAAGGTTTAGAAGG TCTTACAAGAGCTGCTAATGCTAGTGAGCATATCATTAAATCTGATGGGATTGAAAAGAGAAGATCTGCTGGTTCAAATGATAGACCTGATGATCAAATA AGAACTTCATCTGCAGCTGAAACAGTAAGAGATGATCAGAATGCAAGCAGTCAAGAGGCACATGGATATACAATGGATAATGCACATGATCAAGGGACTT CTCAAGGTAATCATCACACTGATAATCCAAATCAAACAGTGCAGGGTATGAGAGTTGAAGGGGAGACTCAAAACCCGTCAATGGAACTCGGAGTGGACTT TATGCCTGAAGAGATTGGAGAGGGTGCTGTCTTGCATAACCCAGATCAAATTGAGATGACTTTTCATGTTGAGAATAGGGCAGATGATGACATGGGTGAT GAAGATGATGATATGGGTGATGATGGTGATGATGATGAAGATGATGAAGATGGAGAGGATGAAGAAGAGGATATAGCAGAAGATGGTG
• Tissue: flowers
• Gene name: LI_gene_77157;
• Additional information: details;

Expression of Ll_transcript_32681

FPKM

• FPAB: 0.7
• FPNAB: 0.9
• LF1: 0.5
• LF2: 0.6
• LF3: 0.8
• LF4: 0
• UF1: 0
• UF2: 0.8
• UF3: 0.5
• UF4: 0.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_32681

• Blastp: E3 ubiquitin-protein ligase UPL1 from Arabidopsis with 61.53% of identity
• Blastx: E3 ubiquitin-protein ligase UPL1 from Arabidopsis with 61.16% of identity
• Eggnog: ubiquitin protein ligase(COG5021)
• Kegg: Link to kegg annotations (AT1G55860)
• CantataDB: Link to cantataDB annotations (CNT0000539)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448017.1)
• Pfam: Domain of Unknown Function (DUF913) (PF06025.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;