Ll_transcript_32685

• Id Trinity: FTRINITY_DN58447_c4_g1_i6
• Name Transcript: Ll_transcript_32685
• Sequence: GAGAAAGAGGACACTTGAAGTGAATGTTTGATTATTGAGAAGATAGAAGAACCTTTAAAAGGCTTTGTTTGGGAGTTCGATAAGGTTGGTGTCTTCTCCT TTTACAATACTAATATGTATTTTTTTATGTATTTGATTCATTGGGAAATACTCTGGCCACCTTTTTGAAGAGAACAGTTGGGAAATACTCCATAAGAGAC ACTTCTTTGAATTCAAAATTGTTTGCATTTGCACAAGGATTTGGTGGAAAGGAAGAGGGACTTGGATTAATTGCATCAGCTGCACCTAATGCCTGTGACC CTCTTGCTTATGAATTGGGTTATACCCTTCATTTTGAGTTTTATGCAGCAAATAAATCAGAGTGTGACATCAAGGTGTCTGAACCCTTGGTACAAGGATT GCAAATTATTCACTTATGTGACATCAACAAATGTGTGGAAACTGATCTGGAGCTTCTGCGTAAGTTAGTTACAGAATATAAGTTACCTGCCGGTTTAAGA TTTTCTCTATTGACAAGATTGCGGTTTACAAGGGCATTTGGTTCTTTGGCTTCTAGACAGCAATACACATGCATTCGTCTTTATGCTTTCACAGTTTTTA TTCAAGCATGTAGTGATGCCAATGACCTGGTTTCGTTCCTTAATGCTGAGCCTGGATTTATCAATGAATTAGTGTCATTGCTGAGCTATGAAGATGCAGT CATGGAAAAAATCCGGATTTTATGCTTGCATTCATTAGCTGCTCTTTGCCAAGATCGATCCCATCAAACTTCAGTACTGACAGGGGTTACATCTGGTGGG CACCGTGGAATTTTATCTAGCCTGATGCAAAAAGCCATTGACTGTGTTGTTAGCGGTGATAACTCAAGATGGTCTGTTCATTTTGCAGAAGCTCTATTAT CGCTTGTCACTGTGTTGGTTTCATCATCATCATCATCTGGGCGCTCTGCCATGTGTGAAGCAGGATTTATTCCTACTCTGTTACCCCTCCTTAAAGATAC AAATCCACAGCATTTGCATCTGGTTGAAAAAGCTGTGCATATTTTAGAAGCTTTTATGGAATACAGTAATCAAGCTGTTGCATTGTTCAGAGATTGGGGA GGTTTAGATGATACTATCTCTCGCCTATATATTGAAGTCTCCCATGTAGAAAGTGGTGGAAAGCATCCTGATGAAAATTCTGAGTCTTGTGCTAGGAATG TACATATGAAAGAAGGTTCTTCTACTGGCCTAAATGGCATGCAACCCTTGTATTCTGAGCCATTAATTGCATATCATCGGCGGTTGCTGATGAAAGCTTT ATTGCGTGCTATATCCCTTGGAACTTATGCCCGTGAAAGCATTGCTCATATCTATGGGTATGAAGAGAATGTGCTACCTTATTGCTTATGTATAATTTTC AGAAGAGCCAAAGATTTTGGTGGTGGAGTTTTTTCGCTCGCAGCTACTGTCATGAGAGACTTAATACAAAAGGATCCGACATGTTTTCCTGTATTAGATA CAGCTGGTCTTCCGTCAGCCTTCTTGGATGCTATAATGGACGATGTTCTGAACTCTGCCGAAGCTATCACATGCATCCCCCAGTGTTTGGATGCCTTATG TCTTAATAGTAATGGTCTCCAGGCTGTAAAAGATAAGAACTCTTTGAGGTGTTTTGTGAAAGTGTTTACTTCTAGAACATATTTGCGTACTCTTACAGGT GATACACCTGCATCTTTGTCTAGTGGATTGGATGAATTAATGCGCCATGCTTCTTCGTTACGTGGGCCTGGAGTTGATATGTTGGTTGAGATTTTGGAAA CTATCTCAAAAATTGGGTCAAGAACCGATTCACCGTCCTTGCCTTGCTCTTCAATCTCTGTTCCAATGGAAATGGATGGTGAGGACAATAATTTGATGTT GCCTGATAACAGGGAATCATCCAAGGCAGATAGTGCAGAGCAAATTATTGAGCCATCTGATGCTTCAGTAATGAATATTGAGTCCTTTCTTCCAGATTGT GCTAACAATGTTGCTCGTTTACTTGAGACAATTCTTCATAATGCTGATACGTGTCGAATATTTGTTGAGAAAAAGGGGATTGAAGCTGTTCTCCAGTTAT TTACCTTGCCATTGATGCCTCCTATTGTTTCTCTTGGGCAGAACATATTTGTTGCTTTCAAGAACTTCTCCCCACAACATAATGTTTCTCTTGTTCGCAC TCTATGCTCCTTCTTGAGGGAACATCTGAAATCTACCAATGAGTTTTTAGATTTGGTGGGAGGAACTCAGATTGCTCTAGTTGAATCTGCAAAGCAGACA AAGGTGTTGAAATATCTTTCTAGTCTTGAAGGTCTCCTATCTCTTTCTGCATCTTTGTTAAAGGGAGCAGCAATTACTGTGGTCTCTGAACTAAGCACTT CAGATGCAAGTGTTTTGAAAGATATTGGGAGATCCTACAAAGAAATAATTTGGAAAATATCTTTGTGTAATGATTCCATGGCAGAGGAAAATAACACTGA TCAAGAACCCGAGATGTCACAGGTACCCTCACCTGATACTGTTGAAAGAGAGAGTGATGATGATGGAAATGTTCAGACAATGAGATACACAAATTCAGTT TTTGCTGGGAGTGGTTCACATTCCATGTGGAGTGGAGAACGTGACTTTGTTTCTGTAGTTCGTTCTGGAGAAAGTTTGCACCGCCGTAATCGGCATGGAT TATCCCGCCTAAGAGGTGGAAGGACTGGTCGTCACGTGGAAGCTTTAAACATTGATTCTGAGGCAGCTTCAAGTTTGGTGGAGGCACCTTCATCCCAAAA TCTGAAAAAGAAAAGCCCTGATGTTCTTGCCTCGGAGATTCTTAACAAGCTGGCTTCAACTTTGCGCTCTTTCTTCACTGCTCTTGTAAAGGGATTCACC TCACCGAATCGTCGTAGAGCTGACCCTGGGCCACTAAGCTCAGCTTCAAAGATTCTCGGAACTGCCTTAGCTACAAATTTTTTAGAGGCTCTTAGTTTTT CTGGGCACTTTACTTATGCTGAACTTGAGATGTCGCTTTCTGTAAAATGTAGATATCTTGGAAAAGTTGTGGATGATATGGCAGCTCTCACATTTGACAG CAGGCGCCGGAGTTGTTATACTGTCATGGTTAATAATTTTTATGTCCATGGGACATTTAAAGAGCTACTTACAACATTTGAAGCTACTAGTCAGTTGCTA TGGACACTTCCATGTTCTTTTCCATCCTCAGATATTGATATTGGAAAGAAAGGGGATGGGAGTAAATTGTCCCATAACATTTGGCTACTTGATACATTAC AAAGCTACTGTCGTTTGCTCACGTATTTTGTAAACTCTTCTATACTTTTGTCCGCAACCTCAGCATCTCAGGCAGAACTTCTTGCTCAGCCAGTTGCAGT TGGCCTGTCAATCGGACTCTTTCCGGTTCCTAGAGATCCAGATGCATTTGTTAAAATGTTGCAATCCCAGGTTCTGGATGTGATCCTACCAGTCTGGAAT CATCCAATGTTTTCTAATTGCAGTCCTGGTTTCATTTCCTCTATTATTTCACTTGTTACACATGTATACTCTGGCGTTGGAGATGTCAAGCGGAATCATA GTAATATTGTGGGAATCACAAACCAACGTTTCATGCCCCCACCACCTGATGAGACAACTATTGGCACAATTGTTGAAATGGGATTTTCTAGGGCACGGGC TGAGGAAGCACTGAGAAGAGTTGAAACAAATAGTGTTGAAATGGCCATGGAGTGGCTGTTTAGTCATGCTGATGATCCTGTACAGGAGGATGATGAACTT GCAAGGGCACTTGCTCTGTCCCTAGGAAATAGTTCTGAAACTAGTAAAGTGGATGGTGCTGAGAAGACTATAGGTGTGCTAACTGAAGAGGGACATGTGA AGAAACCTCCAATTGATGATATACTTGCTGCTTCTGTAAAGCTGTTCCAGGGGAGTGATTCTGTGGCATTTCAGTTAACAGATTTGCTTGTAACACTTTG CAGTCAGAACAAAGGTGAAGATCGCCCAAAAATAATATCTTATCTTCTGCAACAGCTAAAACTTTGTCCATTGGATTTTTCGAAGGATAACTGTGCATTG AGTGTGTTAGCACATATTATAGCACTGCTTCTTTTTGAGGATGGAACTACACGTGAAATTGCTGCTGAGAATGGCATCATATCTACTGCCATAGATATCT TGACAGACTTCAAAGGCAAACATGAGTCAGGGAAAGAACTACTGGCACCTAAATGCATTAGTGTTTTACTACTTATATTGGACCAGATGCTGCAGTCAAG ACCAAAAACTGAGAATACAGATGGAACCCAAACTGGTTCTGTGCCTGAGTCATCTGGGGATCATGGTTCCCTTCAATTTGCAGGTGTGATTGTGCAGAAG GAAAAAAAATTAGATGTAAATGTGAAAGAACCTGGTGCTGCTTTAGATAACATACTGGGGAGCTCTACTGGTTTTGCATCTATTGATGAGAGTCTTAAGT TGCTGAATATTGTTTGTGATTTGATAAAACAACATGTCCCGGCTGTGGTCATGCAGGCTGTTTTGCAGTTATGTGCCCGATTAACAAAAACACATGCTTT GGCTTTACAGTTCCTTGAAAATGGAGGGCTGACTGCTCTTTTTAGTCTTCCAAAGAATTGTTTTTTTCCTGGGTATGATACTGTTGTATCAGCTATTGTT CGACATCTCCTTGAAGATCCTCAAACACTACAAACTGCCATGGAATTAGAGATACGACAAACTTTAAGTGGAAATCGCCATTCTGGACGTGTCTCTCCCC GATCATTTTTGACATCATTAGCCCCTGTTATCTCTAGGGATCCAGTGGTTTTCATGAAAGCTGCAACAACAGTTTGTCAGTTAGAGACATCAGGGGGAAG GACAATAGTTGTTTTATCGAAGGAAAAAGAAAAGGAAAAATCTAAAGCATCGAGTACTGAGGCTGGGTTATCCTCTAATGAATGTGTCCGAATACCTGAA AGCAAGTCACATGATGGATCAGCTAAATGTTTGAAAAGCCACAAAAAGGTTCCTGTTAATCTCACTCAAGTAATTGATCAGCTTCTTGAGATTGTGCTAA AGTACCCGCCTATGAATGGGCAGGAAGACTCTGAGTGTGGCTCAACTTTCATGGATATAGATGAACCTGCTATGAAGGTTAAGGGTAAATCAAAGGTTGA AGAGGTGGGAGTGTTAGAGACTGAATCTGAAAGGTCTACTGGATTGGTGAAGGTAACTTTTGTTCTCAAGTTATTAAGTGACATTCTTCTAATGTATGGG CATGCAGTGGGTGTCATACTCAGACGTGATTCTGAAATGGGTCAATTCCGTGGATCCAATCAACCATCTGGACATAGTGGTATTATCCATCATGTATTAC ATCGGTTGCTGCCCCTCTCTGTTGACAAGTCTGCAGGACCTGATGATTGGAGAAGTAAGTTGTCTGATAAGGCTTCATGGTTCCTGGTAGTTTTGTGTGG TCGGTCTAGTGAAGGGCGTAAGCGAGTGACAAATGAACTTGTTAAAGTATTGATGTCCTTTTCAAACTTGGAGAGCAATTCAACGAAAAATAGTTTACTG CCAGATAAAAGGCTTTTTACTTTTATTGACTTAGTATACTCTATTTTGTCAAAAAATTCATCAGCTGGTAGCCTACCGGGTTCTGGATATTCGCCTGACA TTGCGAAAAGCATGATAGATGGTGGAATCATTCAGTGTTTAACTAGTATCCTGCAAGTGGTTGATCTGGATCATCCCGATGCACCCAAGATTGTGAATCT TATACTAAAAGGTTTAGAAGGTCTTACAAGAGCTGCTAATGCTAGTGAGCATATCATTAAATCTGATGGGATTGAAAAGAGAAGATCTGCTGGTTCAAAT GATAGACCTGATGATCAAATAAGAACTTCATCTGCAGCTGAAACAGTAAGAGATGATCAGAATGCAAGCAGTCAAGAGGCACATGGATATACAATGGATA ATGCACATGATCAAGGGACTTCTCAAGGTAATCATCACACTGATAATCCAAATCAAACAGTGCAGGGTATGAGAGTTGAAGGGGAGACTCAAAACCCGTC AATGGAACTCGGAGTGGACTTTATGCCTGAAGAGATTGGAGAGGGTGCTGTCTTGCATAACCCAGATCAAATTGAGATGACTTTTCATGTTGAGAATAGG GCAGATGATGACATGGGTGATGAAGATGATGATATGGGTGATGATGGTGATGATGATGAAGATGATGAAGATGGAGAGGATGAAGAAGAGGATATAGCAG AAGATGGTG
• Tissue: flowers
• Gene name: LI_gene_77157;
• Additional information: details;

Expression of Ll_transcript_32685

FPKM

• FPAB: 0
• FPNAB: 0.1
• LF1: 0.1
• LF2: 0.4
• LF3: 0
• LF4: 0.1
• UF1: 0.1
• UF2: 0.1
• UF3: 0.6
• UF4: 0.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_32685

• Blastp: E3 ubiquitin-protein ligase UPL1 from Arabidopsis with 60.34% of identity
• Blastx: E3 ubiquitin-protein ligase UPL1 from Arabidopsis with 60.19% of identity
• Eggnog: ubiquitin protein ligase(COG5021)
• Kegg: Link to kegg annotations (AT1G55860)
• CantataDB: Link to cantataDB annotations (CNT0000539)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448026.1)
• Pfam: Domain of Unknown Function (DUF913) (PF06025.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;