Id Trinity | FTRINITY_DN58449_c2_g1_i12 |
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Name Transcript | Ll_transcript_32059 |
Sequence | CCACTAACCGGCAATAACAAAGTTACAATCCAATCTTATGTCTGTCTCATCAATCTATAACAAATCACCTTCTCCACCACACAACAACAACATCAATAAC AACAAACTATAATGGAGATCAAACCTGGTTTGTCAGCACTTGTCACTGGAGCTGCCTCTGGAATTGGCAAAGGTATTGTCCTAGCTCTTGCAGAGAAGGG TATATTTATCACACTTGTTGATTTCTCTGAAGAGAATGGAAGAGAAGTGGCAGCCCTTGTTCAGAAAATTAATGCCAAGTTTCATCCCAACTTAGATTTT CCATCTGCCTTGTTTGTCAAATGCGACGTCGCTAACTCAAGGGACCTAGCTGCTGCGTTTGAGAAGCATTATTCGACATATGGAGGACTAGACATATGTA TTAACAGTGCAGGGATCAGTAACCCGATACCATTCGATAAGGATCAAACAGATGGCACTCGTTCATGGAAACACACTATTAATGTGAATTTCACTGCTAT TATTGAATGCACTCGTCTTGCGATTAAAACCATGGAAGCTGCCAAAAGGCCTGGTGTGATTATAAATATGGGTTCTGCTTCTGGTCTTTATCCAATGTAT GATGATCCTCTCTATTCGGGCTCTAAAGGTGGTGTTGTTATGTTTACTAGATCTCTTCGTCTATACCAACGCAAAGGAATTCGAATCAATGTTCTTTGCC CTGAGTTTATTGAAACTGAGATGGGCTTAAGGGTGGATTCCAAATTTATCAATTTGACAGGGGGCTTTATACCTATGGAAATGTTGGTAAAAGGTGCTTT TGAGCTCATTACGGATGAGAGTAAAGCTGGTCATTGCCTATGGATTACAAATCGTCGAGGTCTGGAGTACTGGCCCACCCCATCAGAGGAAGCGAAGTAC TTGACAAGTTCCGCCTCACGTTTCAAGAAAAGATCCGAATTCAATGCTCCACCAATTAAAATCCCCGAGAGTTTTGAGAAAATAGTTGTTCAGACCTTGA CTCACAACTTTCGGAATGCTACCACGACAGTGAGAGCACCACTGAGATTACCTGTCAAACCAAAGCACGTCCTGGTGAAGATAATTTATGCTGGCGTAAA TGCTAGTGATGTAAATTTTAGCTCAGGCCGCTATTTCGGTGGCAACAACAGTGACACTGCATCTCGTCTTCCATTTGATGCAGGATTTGAGGCTGTAGGA ATAATTGCCGCAGTTGGGGATTCTGTCACAGATTTGAAAGTTGGTATGCCTTGTGCATTCATGACTTTTGGAGGTTATTCAGAATTCATAATGATTAATT CAAAACACGCCCTTCCAGTGCCTAGACCGGATGCAGAAGTTGTTGCTATGCTGACATCAGGATTAACAGCCTCAATTGCTCTAGAAAAGGCAGGAGCAGC AAAAATGGAATCCGGAAAAGTGGTTCTTGTTACTGCTGCTGCAGGAGGAACTGGGCAATTTGCTGTTCAGCTTGCAAAATTAGCCGGAAATACAGTGATT GCAACATGTGGAGGTGGGGCAAAGGCCAAGCTTCTGCAAGAATTGGGAGTTGACAGAGTCATAGACTATCATAGTGAAGATATAAAAACTGTTCTAATGA AAGAGTTCCCGAAAGGTATTGACGTCATCTACGAATCTGTTGGTGGTGACATGTTAAACTTGTGCTTGAATGCTTTGGCAGTCCATGGACGGCTCATTGT CATTGGCATGATTTCTCAGGTTTTTCTTTATTTTTTATTTTTCTTCTCGTGACACAAATTTACTATATCATAGCAGTGTGTCGAATTGCACAGCGCAATT ACGTCCACAATATTATTGTTTTGGGAGTCTCCACAATGGCATCACAACCACATTTGCCATAAACGTAACATAACTATAACACTGTTGTAGCAAAAAATTT CGCCACATCTTTAAAATAACTCCTCCTAGTAGCTGTAAATGTTCCATACTGACCCTTTTACTCTCTGCACTCCCCTCTTTAATTGTTGCTCTATCATATT CCTTCAATAGTAGTCTTCTGAGTTATGAATTGCAGTAAACTGTTCCATTCTCTAAAGAAATTTGTTGTTTTATCTAATGAAGTATACTGAATTTATATAC TTCTATTCAGAACAAAATGATTCATATTCAATGTTTTCATTTATATCAGTATCAAGGAGATAGTGGTTGGACGCCATCAAAGTACCCTGGATTATTAGAG AAGCTCTTGGCGAAGAGCCAAACTGTGGTATGTAGTAATATCATGGAGTTGTACACTTGTAGGCTACTATTACTTTGTTTCTGATTCCTTATTTTATTCG CCGCGTTATTATTATAATTTATATGAAGCTAATATTACATCATTCAAGATTCAAACTTGTTTTGGATGAAGTTGAACTTTCAAACCTCAATCCTGTTATC ACTTCAGCTCATGCAGGGATAGAATATAGGAAGGATGACTGCTTTCAATTCTTGGTTAATATAGTCTTCCTGGAACATTTTTTTTCCTAGAACTAGACAA AGTGTTGTTAACATAATATATAGAAAGGTAACATGATTATTAGTTTGCTACTGAATGAGTAATTTGAATTGATATTTTCACTGTCTGGGTAATTAGTAGT TGATTTCTGTATTAGTTTCTAGCTAAATTATTCCCAATATTGGACCACTGGTTAATTTGTTAATATATGGTTAACCAATTAATAATCTCACTATCAAACT TCCCATTTCTTCTGTAATATGCTTATCTTATAGTTTTACATAATTCCGAATTTTCAGGCTGGATTTTTCTTGGTGCAATATGGTCACTTTTGGCAAGAAC ATCTCGACAAACTATTTAATCTTTACTCTAAGGGAAAGCTAAAGGTTGCTGTTGATCCAAAGAAATTCAATGGCCTGCATTCTGTTGCAGATGCTGTAGA GTATCTGCATTCAGGAAAAAGTGTTGGGAAGGTATTTACTTTCTTAAGGAATACAGTGCAATTTTAATTTTGTAACTGTTTTTTGGTACTATCAATGTAT CCCCTCACCTATGGGTAAGAAACTAATCTATTTCGAGGTGTGTGGCTATCTCTCCCAACAAGTGTCGCTCTCAGGAATCGAATGATTTGTAACTATTCTA TAAAATGTACTGACCTAATAATTTCTCTAGGTTGTTGTCTGTGTGGACTCTTCTTTCCATCCTCAAGTGGCCAAATTGTGAGTCAACACATGTCAAGTGA CCTTACACAAATGATATTCCATCAGTTTCAAATGCAGAAAAGAGAACTTAAGCATGCAGCTCTTCTCCAAAGATTCTAGTGGAATGTTGTTGAAAATAGT TGCATAAGATCAAATCCCACTCTAGTGCTGAATTATTGTCATTTTCTTGGGGCTAATCATGTGATTGTGAGTGTTAGAAATAAATAAGAAAGTGGAATAA GATTTATGATGTTTAAGTTTACAGTAATAAACTAATAATAATGCATCTTTCATGTCCATGATTGAAGTAGTGGACAATTATCTGTTTTGAACCTTACTGA AAACTTATGAGCCTATCCTTTATTTGCCTTATTGGTCAAGTGATTGCTGATTCCGTACTACATGATACTTTGTTTTTAACCTATGTTGTCCTAGAGTTTG TATCACTCCATGTGCCATAAACTTATGATAAGTCAGAAAAAATATATTTAATTATTAAGTATTTTTCTGAACAATCACAAGCTCATGACACATAGAGTGG TACAAACTGTGGGACAGCAGATGTGCTCCCATATTAGGTATGAGGAACACATCTT BLAST |
Tissue | flowers |
Gene name | LI_gene_77178; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_32059
Blastp | Prostaglandin reductase-3 from Bos with 47.64% of identity |
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Blastx | Prostaglandin reductase-3 from Bos with 47.64% of identity |
Eggnog | alcohol dehydrogenase(COG2130) |
Kegg | Link to kegg annotations (532505) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019424213.1) |
Pfam | short chain dehydrogenase (PF00106.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |