Id Trinity | FTRINITY_DN58465_c1_g1_i27 |
---|---|
Name Transcript | Ll_transcript_32175 |
Sequence | CAACAACCTTGGTTTGAGTCTTTGAGATTTGAGTTCTGTCAACTTTTATAGCACGCCATTCCTTAGATCCAATCTAAACTTATTTTGGCATCTAATGAAA CATTATTATATTTTTATTTTGCAAACCCTAACTAGTGCTTTTTCTTGAGCCTTTTTTTCTTCGTATGTTACTATTATTACTGTTAATCTACTATCATTGA ACGACATGCATAATTGAGGAGAGAAGAAAAAAAGATAGAAGACCCAAAAACATGGGACAGTTGATGGCGAGGAAATAGTTATATAAATGGTTGAGCTATG TTTAGTTTAACCTCACAAACATAACCATTCCTCACTTATTGCATGGTTCTCTTCATTCTCTCGCTCTCATCACACCCTTATTACCCTCTTCTTATTCTTT CAACTTTCAACTTTCAACTTCCAACTTTCAACCACATTCATACAGATTAAGGGTACGTACCCTCTCTAAGTCTCTTTGTTCCTATCTTACTTTTTTGCTT GCTTCTACCAGGTCCTTTTGGATTTGTTTTGCTTCATAGATCTTATTCTTGCTTCTGTGTTTTTGGTTTCTATTTGTTGTTTTTGGATGCCCTCAAAAGC TTGTTATGATGACTGTGAAGTGCTCATTCGGTGTGTTATCTTGCAAGCTTTTCACTTTTTACCATTTTACATTCAAACTCAATATGGGGTTTCAAGTTTA TTAAAAAAAATCTTCCCTTTTTCTGTTGAAAAAAATGGTTTGTTGACTTTGTTCTATGATATATTCATGCTTTGAATCACGTTTCTATGGTATTGTCTTG TATTTGCTCCTTTGATCAATGTAAAACATAGACACATGCAGCTTCACAGCCATTGGTTAGTAATGAGAGGTGAGAACAAAAGACAGCTAAGTTGATTTGA AATCACTGTCAAAAGAATAATGAGTACTTTTCTTACATGTCAAGAAACCAGATCACATTACTAACTACTAAGTGATGCACTTTCCCTTCTTCATCAATGG CAAATATGCCATGGCTGTGAGATCCAGCATTTCCTTTTGCCTTTTTTAGTCAATAATGGGGTTGGAATGGTCCTCACTAGGATGGCTAGGAGGACCAATT TTTGTTGGGTCCCAGTATCATGTGAAGATCATAAATGCTGTCTCTCAAAAAATGTAAAGTAGCTACCAAGTGATGTTAGTATTAGATTCTTTTCTATTTT ATTTATGAGCATCACACACTCATATCTATTTACTTTTAACTTTTTGATATATAAAAAACATTATTCTCTATATATATATATATATATATATATATAAACC ATCAATCTCTTTTTCTATTTACCAATTTTTAACTTCTCATAATTGGATCTGTCATTGGAATTTGTGTCTTGTCAGGTAGATCTGCTTGGGGAACTGTGTT AATAGTTTTCACTATTGATGTGTGATGTGTTGCAATTAATAATCAATACTGTTTCTTGTCTTTTCTTGGTTATTGATTGCTAATAATGCTAACAATAACA TTCTAAATTTCTAACACACAACTCATCTTAACACATACTTCATATGAGGTGATCTGAATCTTGGTGATGATTATCAGACATATTCCTTGATTTTTGCTTG TTCTTGTTCTTGTAGGCAATATGAATTATGTGATCTGAAAATGTGGTGATCCTAATCCTTGGTTTGCTTCTTTAGTTAGCTGGTTGAACTGGAACTAGGA GGGTATGATAATTCAGATTAAGTAATTTTCTTAAGTTGAATGAGGTGGTTAGAGACTTAGAATGGCTCTTGTACAAGGTGTCATTTTTCTTGAGGATTAC TTATGACTGAAGAGTAATGATAACATGTTACACTTAAATATTAGATACTACTGTTTTTTTTGGTGAAGATTTATAGGCTTATTTTCAAAACTACAAAAGT TTTGTATATGAGTTGGTAAAGGAAGTGGCATAGTTGCATGCACTGAAATTGAGTATGCTGCAATTTTGCAGATAGCTAGTTAATATTTCTTGAACCATGA AGCATAAAGATGGAAAACCAATCAACCTTCCGAACAGGAAGAGGAATGTAACTTTGGCAATCACAGTTATTGCTCTATGTGGTTTAGCCTTCTATCTGGG AGGAATGCAATGTAATTCTCAAAATGGTGGGTTTGTGACAAATACCGTTGAGAAGGCCCTTGATCTTCCGAAGCAATCAGGTTCTCTGCAAGTTAGACCC ATCAATTTCCCTGAATGCAGCACTGACTTACAAGATTACACCCCATGCACGGATCCGAAGAGATGGAGAAAGTACGGAACTTATCGGCTTACTTTGTTAG AAAGGCATTGCCCTCCACTTTCTGAAAAGAAAGAATGCTTAGTTCCTCCACCAGATGGATATAAGCCTCCAATCAGATGGCCAAAGAGTAGAGATGAATG TTGGTACAGGAATGTGCCATATGATTGGATCAACAATGAGAAGTCTAATCAGCATTGGTTGAGAAAGGAAGGGGAGAAGTTCCTCTTTCCTGGTGGAGGT ACTATGTTCCCCAATGGTGTTGGTGAATATGTTGATCTAATGGTAGATTTGATCCCAGAAATGAAAGATGGGACTGTGAGAACTGCCATTGATACTGGTT GTGGGGTGAGTTTTCCAAATAGTAATGAAAATTGTTGCAGTTCTCAACATTCCTTCTTAAACATCATTTACTAGTTCACCTAAACCTGTTGTTTTCTGAA TGCAATGTGAATATATTTTACTGCTTAGTGAATTCTGTTGCAAATTTCAATCATATAGTACTCAAGAGAATTAGTCCACATAACTGATTTTATTTTAGGT TGCTAGCTGGGGCGGCGACTTGTTGGATCGTGGGATTCTAACAATTTCACTTGCTCCAAGAGATAACCATGAAGCTCAGGTTCAATTTGCTCTGGAGCGT GGTATCCCGGCAATGCTTGGAGTTATTTCTACACAGAGACTTCCATACCCATCAAACTCCTTTGATATGGCTCATTGCTCTAGATGCCTTATCCCATGGA CAGAATTCGGTGGAATTTATCTTCTTGAAATACACCGTATTCTGCGTCCTGGAGGATTTTGGATTTTGTCCGGTCCACCTGTCAACTACGAGCGTAGGTG GCGTGGATGGAACACGACTGTTCAAGAGCAAAGATCGGATTATGAGAAGTTACAGGACTTACTCACTTCAATGTGCTTCAAATTGTACAATAAAAAGGAT GACATTGCTGTATGGCAGAAGTCTAAAGATAACAATTGCTATGATAAACTTCCTAGTGAAACCTATCCACCAAAATGTGATGACAGTTTTGAACCAGATG ATGGATGGTACATTCCACTTCGAACTTGTGTTGTGGTTCCCGAATCCAAATATAAGAGATCCGCGCTCACATACATGTCTAAGTGGCCGGAACGATTGCA CGCTACCCCTGAACGGATTGCAGCCATTCATGGTGCTAGTGCTAGTACCTTTACTCATGATAACAGCAAGTGGAAAAAGCGTGTTCAACATTACAAGAAG TTGTTTCCTGAACTTGGAACTGAAAAGGTAAGAAATGTGATGGATATGAATACACTGTATGGAGGCTTTGCTGCATCCTTGGTTGATGATCCTTTGTGGG TCATGAATGTGGTATCAGCCTATGGAACTAATTCACTCCCTGTGGTTTATGATCGAGGACTTATTGGAACCTATCATGACTGGTGTGAAGCTTTTTCAAC ATATCCTAGAACATATGACCTCCTTCATCTTGATGCACTTTTCACTGATGAAAGTCACAGGTGTGAAATGAAGTATGTGTTGCTGGAAATGGACAGAATA TTAAGACCTGGTGGGCATGCTATAATTCGAGAATCCACTTATTTCATTGATGCCATTGCAACCATTGGCAAGGGTATGAAATGGGCATGCCGTAAAGAAA ACACTGAGTATGGTGTTGAGAAAGAAAGGATATTGATATGCCAGAAAAAGCTATTGCACTAATCTAACATTGGTTCGAGACAACAAATTGTAATCATAAT TCCAAATGATTCCATAGCCACTCTCATCAACAAAGAATGCTTCATCATTCTATAATATATAGACACCAAAAATATATTCTATAGCATGGGTAGTGCAATA ATCTGATTTTGTTACTTCATATAGAAGATTTTCTTATAGATATTCTTTATAAGGCATCAATTGTATCAGGTATGTTTTTTATCTATTTTTTTTTCGCTGT GTAAATTCCTGGTGAATTCATGGGAAGGAAAGAAAGTTCCTAGTCCCACAGAATTCTTTACAAGAGAATATTACAAGTTTTTGTATTCATATTGGGCACT GTTACATTAATACTCTCATAATTTGTAATTCAATGTCTTGGACCGATGTTATGCATTTTATTTTTATGGCAAATTAGTGGCTGAAGTCCAATTCAAATGA ATATCTTTTATGATAATATTTTCTâBLAST |
Tissue | flowers |
Gene name | LI_gene_77312; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_32175
Blastp | Probable methyltransferase PMT20 from Arabidopsis with 73.93% of identity |
---|---|
Blastx | Probable methyltransferase PMT20 from Arabidopsis with 75.51% of identity |
Eggnog | Methyltransferase(ENOG4111CGI) |
Kegg | Link to kegg annotations (AT1G31850) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019423381.1) |
Pfam | Putative S-adenosyl-L-methionine-dependent methyltransferase (PF03141.15) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |